Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Mutational patterns correlate with genome organization in SARS and other coronaviruses

Identifieur interne : 005B01 ( Main/Exploration ); précédent : 005B00; suivant : 005B02

Mutational patterns correlate with genome organization in SARS and other coronaviruses

Auteurs : Andrei Grigoriev [Allemagne]

Source :

RBID : Pascal:04-0322792

Descripteurs français

English descriptors

Abstract

Focused efforts by several international laboratories have resulted in the sequencing of the genome of the causative agent of severe acute respiratory syndrome (SARS), novel coronavirus SARS-CoV, in record time. Using cumulative skew diagrams, I found that mutational patterns in the SARS-CoV genome were strikingly different from other coronaviruses in terms of mutation rates, although they were in general agreement with the model of the coronavirus lifecycle. These findings might be relevant for the development of sequence-based diagnostics and the design of agents to treat SARS.

Url:


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en" level="a">Mutational patterns correlate with genome organization in SARS and other coronaviruses</title>
<author>
<name sortKey="Grigoriev, Andrei" sort="Grigoriev, Andrei" uniqKey="Grigoriev A" first="Andrei" last="Grigoriev">Andrei Grigoriev</name>
<affiliation wicri:level="1">
<inist:fA14 i1="01">
<s1>GPC Biotech, Fraunhoferstr. 20</s1>
<s2>Martinsried 82152</s2>
<s3>DEU</s3>
<sZ>1 aut.</sZ>
</inist:fA14>
<country>Allemagne</country>
<wicri:noRegion>82152</wicri:noRegion>
<wicri:noRegion>Fraunhoferstr. 20</wicri:noRegion>
<wicri:noRegion>Martinsried 82152</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">INIST</idno>
<idno type="inist">04-0322792</idno>
<date when="2004">2004</date>
<idno type="stanalyst">PASCAL 04-0322792 INIST</idno>
<idno type="RBID">Pascal:04-0322792</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000873</idno>
<idno type="wicri:Area/PascalFrancis/Curation">000117</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">000810</idno>
<idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">000810</idno>
<idno type="wicri:doubleKey">0168-9525:2004:Grigoriev A:mutational:patterns:correlate</idno>
<idno type="wicri:Area/Main/Merge">005F61</idno>
<idno type="wicri:source">PMC</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7127256</idno>
<idno type="RBID">PMC:7127256</idno>
<idno type="wicri:Area/Pmc/Corpus">001896</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001896</idno>
<idno type="wicri:Area/Pmc/Curation">001896</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001896</idno>
<idno type="wicri:Area/Pmc/Checkpoint">001587</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">001587</idno>
<idno type="wicri:source">PubMed</idno>
<idno type="RBID">pubmed:15049309</idno>
<idno type="wicri:Area/PubMed/Corpus">002E77</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002E77</idno>
<idno type="wicri:Area/PubMed/Curation">002E77</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002E77</idno>
<idno type="wicri:Area/PubMed/Checkpoint">002B79</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002B79</idno>
<idno type="wicri:Area/Ncbi/Merge">000721</idno>
<idno type="wicri:Area/Ncbi/Curation">000721</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000721</idno>
<idno type="wicri:doubleKey">0168-9525:2004:Grigoriev A:mutational:patterns:correlate</idno>
<idno type="wicri:Area/Main/Merge">005622</idno>
<idno type="wicri:Area/Main/Curation">005B01</idno>
<idno type="wicri:Area/Main/Exploration">005B01</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a">Mutational patterns correlate with genome organization in SARS and other coronaviruses</title>
<author>
<name sortKey="Grigoriev, Andrei" sort="Grigoriev, Andrei" uniqKey="Grigoriev A" first="Andrei" last="Grigoriev">Andrei Grigoriev</name>
<affiliation wicri:level="1">
<inist:fA14 i1="01">
<s1>GPC Biotech, Fraunhoferstr. 20</s1>
<s2>Martinsried 82152</s2>
<s3>DEU</s3>
<sZ>1 aut.</sZ>
</inist:fA14>
<country>Allemagne</country>
<wicri:noRegion>82152</wicri:noRegion>
<wicri:noRegion>Fraunhoferstr. 20</wicri:noRegion>
<wicri:noRegion>Martinsried 82152</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j" type="main">Trends in genetics : (Regular ed.)</title>
<title level="j" type="abbreviated">Trends genet. : (Regul. ed.)</title>
<idno type="ISSN">0168-9525</idno>
<imprint>
<date when="2004">2004</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt>
<title level="j" type="main">Trends in genetics : (Regular ed.)</title>
<title level="j" type="abbreviated">Trends genet. : (Regul. ed.)</title>
<idno type="ISSN">0168-9525</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Coronavirus</term>
<term>Coronavirus (genetics)</term>
<term>Exons</term>
<term>Genes, Viral (genetics)</term>
<term>Genetics</term>
<term>Genome organization</term>
<term>Genome, Viral</term>
<term>Introns</term>
<term>Mutation</term>
<term>Mutation (genetics)</term>
<term>SARS Virus (genetics)</term>
<term>Severe acute respiratory syndrome</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Coronavirus (génétique)</term>
<term>Exons</term>
<term>Gènes viraux (génétique)</term>
<term>Génome viral</term>
<term>Introns</term>
<term>Mutation (génétique)</term>
<term>Virus du SRAS (génétique)</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Coronavirus</term>
<term>Genes, Viral</term>
<term>Mutation</term>
<term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Coronavirus</term>
<term>Gènes viraux</term>
<term>Mutation</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Exons</term>
<term>Genome, Viral</term>
<term>Introns</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr">
<term>Exons</term>
<term>Génome viral</term>
<term>Introns</term>
<term>Mutation</term>
<term>Organisation génome</term>
<term>Génétique</term>
<term>Coronavirus</term>
<term>Syndrome respiratoire aigu sévère</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr">
<term>Génétique</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Focused efforts by several international laboratories have resulted in the sequencing of the genome of the causative agent of severe acute respiratory syndrome (SARS), novel coronavirus SARS-CoV, in record time. Using cumulative skew diagrams, I found that mutational patterns in the SARS-CoV genome were strikingly different from other coronaviruses in terms of mutation rates, although they were in general agreement with the model of the coronavirus lifecycle. These findings might be relevant for the development of sequence-based diagnostics and the design of agents to treat SARS.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Allemagne</li>
</country>
</list>
<tree>
<country name="Allemagne">
<noRegion>
<name sortKey="Grigoriev, Andrei" sort="Grigoriev, Andrei" uniqKey="Grigoriev A" first="Andrei" last="Grigoriev">Andrei Grigoriev</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 005B01 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 005B01 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     Pascal:04-0322792
   |texte=   Mutational patterns correlate with genome organization in SARS and other coronaviruses
}}

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021