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Mutational patterns correlate with genome organization in SARS and other coronaviruses

Identifieur interne : 000117 ( PascalFrancis/Curation ); précédent : 000116; suivant : 000118

Mutational patterns correlate with genome organization in SARS and other coronaviruses

Auteurs : Andrei Grigoriev [Allemagne]

Source :

RBID : Pascal:04-0322792

Descripteurs français

English descriptors

Abstract

Focused efforts by several international laboratories have resulted in the sequencing of the genome of the causative agent of severe acute respiratory syndrome (SARS), novel coronavirus SARS-CoV, in record time. Using cumulative skew diagrams, I found that mutational patterns in the SARS-CoV genome were strikingly different from other coronaviruses in terms of mutation rates, although they were in general agreement with the model of the coronavirus lifecycle. These findings might be relevant for the development of sequence-based diagnostics and the design of agents to treat SARS.
pA  
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A03   1    @0 Trends genet. : (Regul. ed.)
A05       @2 20
A06       @2 3
A08 01  1  ENG  @1 Mutational patterns correlate with genome organization in SARS and other coronaviruses
A11 01  1    @1 GRIGORIEV (Andrei)
A14 01      @1 GPC Biotech, Fraunhoferstr. 20 @2 Martinsried 82152 @3 DEU @Z 1 aut.
A20       @1 131-135
A21       @1 2004
A23 01      @0 ENG
A43 01      @1 INIST @2 20873B @5 354000116915820050
A44       @0 0000 @1 © 2004 INIST-CNRS. All rights reserved.
A45       @0 24 ref.
A47 01  1    @0 04-0322792
A60       @1 P
A61       @0 A
A64 01  1    @0 Trends in genetics : (Regular ed.)
A66 01      @0 GBR
C01 01    ENG  @0 Focused efforts by several international laboratories have resulted in the sequencing of the genome of the causative agent of severe acute respiratory syndrome (SARS), novel coronavirus SARS-CoV, in record time. Using cumulative skew diagrams, I found that mutational patterns in the SARS-CoV genome were strikingly different from other coronaviruses in terms of mutation rates, although they were in general agreement with the model of the coronavirus lifecycle. These findings might be relevant for the development of sequence-based diagnostics and the design of agents to treat SARS.
C02 01  X    @0 002A07
C02 02  X    @0 002A04
C03 01  X  FRE  @0 Mutation @5 01
C03 01  X  ENG  @0 Mutation @5 01
C03 01  X  SPA  @0 Mutación @5 01
C03 02  X  FRE  @0 Organisation génome @5 02
C03 02  X  ENG  @0 Genome organization @5 02
C03 02  X  SPA  @0 Organización genoma @5 02
C03 03  X  FRE  @0 Génétique @5 03
C03 03  X  ENG  @0 Genetics @5 03
C03 03  X  SPA  @0 Genética @5 03
C03 04  X  FRE  @0 Coronavirus @2 NW @5 16
C03 04  X  ENG  @0 Coronavirus @2 NW @5 16
C03 04  X  SPA  @0 Coronavirus @2 NW @5 16
C03 05  X  FRE  @0 Syndrome respiratoire aigu sévère @4 CD @5 96
C03 05  X  ENG  @0 Severe acute respiratory syndrome @4 CD @5 96
C03 05  X  SPA  @0 Síndrome respiratorio agudo severo @4 CD @5 96
C07 01  X  FRE  @0 Coronaviridae @2 NW
C07 01  X  ENG  @0 Coronaviridae @2 NW
C07 01  X  SPA  @0 Coronaviridae @2 NW
C07 02  X  FRE  @0 Nidovirales @2 NW
C07 02  X  ENG  @0 Nidovirales @2 NW
C07 02  X  SPA  @0 Nidovirales @2 NW
C07 03  X  FRE  @0 Virus @2 NW
C07 03  X  ENG  @0 Virus @2 NW
C07 03  X  SPA  @0 Virus @2 NW
C07 04  X  FRE  @0 Appareil respiratoire pathologie @5 19
C07 04  X  ENG  @0 Respiratory disease @5 19
C07 04  X  SPA  @0 Aparato respiratorio patología @5 19
C07 05  X  FRE  @0 Poumon pathologie @5 20
C07 05  X  ENG  @0 Lung disease @5 20
C07 05  X  SPA  @0 Pulmón patología @5 20
C07 06  X  FRE  @0 Virose @2 NM @5 21
C07 06  X  ENG  @0 Viral disease @2 NM @5 21
C07 06  X  SPA  @0 Virosis @2 NM @5 21
C07 07  X  FRE  @0 Infection @2 NM
C07 07  X  ENG  @0 Infection @2 NM
C07 07  X  SPA  @0 Infección @2 NM
N21       @1 194
N44 01      @1 OTO
N82       @1 OTO

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Pascal:04-0322792

Le document en format XML

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