Detection and typing of maize streak virus and other distantly related geminiviruses of grasses by polymerase chain reaction amplification of a conserved viral sequence
Identifieur interne : 004A86 ( Main/Exploration ); précédent : 004A85; suivant : 004A87Detection and typing of maize streak virus and other distantly related geminiviruses of grasses by polymerase chain reaction amplification of a conserved viral sequence
Auteurs : E. P. Rybicki ; F. L. HughesSource :
- Journal of general virology [ 0022-1317 ] ; 1990.
Descripteurs français
- KwdFr :
- Données de séquences moléculaires, Phylogénie, Plasmides, Poaceae (microbiologie), Réaction de polymérisation en chaîne, Sensibilité et spécificité, Sondes d'ADN, Séquence d'acides aminés, Séquence nucléotidique, Sérotypage, Virus des plantes (), Virus des plantes (génétique), Zea mays (microbiologie).
- MESH :
- génétique : Virus des plantes.
- microbiologie : Poaceae, Zea mays.
- Pascal (Inist)
- Données de séquences moléculaires, Phylogénie, Plasmides, Réaction de polymérisation en chaîne, Sensibilité et spécificité, Sondes d'ADN, Séquence d'acides aminés, Séquence nucléotidique, Sérotypage, Virus des plantes, Virus streak maïs, Séquence conservée, Phylogenèse, Isolat, Phytopathogène, Séquence nucléotide, Homologie, Spécificité, Clonage moléculaire, Hybridation moléculaire, Méthode Southern, Détection, Réaction chaîne polymérase.
English descriptors
- KwdEn :
- Amino Acid Sequence, Base Sequence, Conserved sequence, DNA Probes, Detection, Homology, Isolate, Maize streak virus, Molecular Sequence Data, Molecular cloning, Molecular hybridization, Nucleotide sequence, Phylogeny, Phytopathogen, Plant Viruses (classification), Plant Viruses (genetics), Plasmids, Poaceae (microbiology), Polymerase Chain Reaction, Sensitivity and Specificity, Serotyping, Southern blotting, Specificity, Zea mays (microbiology).
- MESH :
- chemical : DNA Probes.
- classification : Plant Viruses.
- genetics : Plant Viruses.
- microbiology : Poaceae, Zea mays.
- Amino Acid Sequence, Base Sequence, Molecular Sequence Data, Phylogeny, Plasmids, Polymerase Chain Reaction, Sensitivity and Specificity, Serotyping.
Abstract
The oligonucleotide primers used for amplifications were 17-mers which contained a number of degeneracies. An approximately 250 base pair fragment was amplified from all geminivirus-infected grass and cereal samples tested. The amplification reaction was specific, working down to a concentration of 50 fg/ml of MSV-specific plasmid-cloned DNA and with a 10-9 dilution of MSV-infected maize DNA extract
Affiliations:
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Le document en format XML
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Base Sequence</term>
<term>Conserved sequence</term>
<term>DNA Probes</term>
<term>Detection</term>
<term>Homology</term>
<term>Isolate</term>
<term>Maize streak virus</term>
<term>Molecular Sequence Data</term>
<term>Molecular cloning</term>
<term>Molecular hybridization</term>
<term>Nucleotide sequence</term>
<term>Phylogeny</term>
<term>Phytopathogen</term>
<term>Plant Viruses (classification)</term>
<term>Plant Viruses (genetics)</term>
<term>Plasmids</term>
<term>Poaceae (microbiology)</term>
<term>Polymerase Chain Reaction</term>
<term>Sensitivity and Specificity</term>
<term>Serotyping</term>
<term>Southern blotting</term>
<term>Specificity</term>
<term>Zea mays (microbiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Données de séquences moléculaires</term>
<term>Phylogénie</term>
<term>Plasmides</term>
<term>Poaceae (microbiologie)</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Sensibilité et spécificité</term>
<term>Sondes d'ADN</term>
<term>Séquence d'acides aminés</term>
<term>Séquence nucléotidique</term>
<term>Sérotypage</term>
<term>Virus des plantes ()</term>
<term>Virus des plantes (génétique)</term>
<term>Zea mays (microbiologie)</term>
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<keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA Probes</term>
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<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Plant Viruses</term>
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<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Virus des plantes</term>
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<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Poaceae</term>
<term>Zea mays</term>
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<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Poaceae</term>
<term>Zea mays</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Base Sequence</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Plasmids</term>
<term>Polymerase Chain Reaction</term>
<term>Sensitivity and Specificity</term>
<term>Serotyping</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Données de séquences moléculaires</term>
<term>Phylogénie</term>
<term>Plasmides</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Sensibilité et spécificité</term>
<term>Sondes d'ADN</term>
<term>Séquence d'acides aminés</term>
<term>Séquence nucléotidique</term>
<term>Sérotypage</term>
<term>Virus des plantes</term>
<term>Virus streak maïs</term>
<term>Séquence conservée</term>
<term>Phylogenèse</term>
<term>Isolat</term>
<term>Phytopathogène</term>
<term>Séquence nucléotide</term>
<term>Homologie</term>
<term>Spécificité</term>
<term>Clonage moléculaire</term>
<term>Hybridation moléculaire</term>
<term>Méthode Southern</term>
<term>Détection</term>
<term>Réaction chaîne polymérase</term>
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<front><div type="abstract" xml:lang="en">The oligonucleotide primers used for amplifications were 17-mers which contained a number of degeneracies. An approximately 250 base pair fragment was amplified from all geminivirus-infected grass and cereal samples tested. The amplification reaction was specific, working down to a concentration of 50 fg/ml of MSV-specific plasmid-cloned DNA and with a 10<sup>-9</sup>
dilution of MSV-infected maize DNA extract</div>
</front>
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<name sortKey="Rybicki, E P" sort="Rybicki, E P" uniqKey="Rybicki E" first="E. P." last="Rybicki">E. P. Rybicki</name>
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