Mitogen-activated protein kinase cascades in Vitis vinifera
Identifieur interne : 000074 ( Pmc/Curation ); précédent : 000073; suivant : 000075Mitogen-activated protein kinase cascades in Vitis vinifera
Auteurs : Birsen Çak R [Turquie] ; Ozan K L Çkaya [Turquie]Source :
- Frontiers in Plant Science [ 1664-462X ] ; 2015.
Abstract
Protein phosphorylation is one of the most important mechanisms to control cellular functions in response to external and endogenous signals. Mitogen-activated protein kinases (MAPK) are universal signaling molecules in eukaryotes that mediate the intracellular transmission of extracellular signals resulting in the induction of appropriate cellular responses. MAPK cascades are composed of four protein kinase modules: MAPKKK kinases (MAPKKKKs), MAPKK kinases (MAPKKKs), MAPK kinases (MAPKKs), and MAPKs. In plants, MAPKs are activated in response to abiotic stresses, wounding, and hormones, and during plant pathogen interactions and cell division. In this report, we performed a complete inventory of MAPK cascades genes in
Url:
DOI: 10.3389/fpls.2015.00556
PubMed: 26257761
PubMed Central: 4511077
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Mitogen-activated protein kinase cascades in <italic>Vitis vinifera</italic></title><author><name sortKey="Cak R, Birsen" sort="Cak R, Birsen" uniqKey="Cak R B" first="Birsen" last="Çak R">Birsen Çak R</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>Department of Horticulture, Faculty of Agriculture, Ege University</institution><country>Izmir, Turkey</country></nlm:aff><country xml:lang="fr">Turquie</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="K L Ckaya, Ozan" sort="K L Ckaya, Ozan" uniqKey="K L Ckaya O" first="Ozan" last="K L Çkaya">Ozan K L Çkaya</name><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Pharmacetical Biotechnology, Faculty of Pharmacy, Cumhuriyet University</institution><country>Sivas, Turkey</country></nlm:aff><country xml:lang="fr">Turquie</country><wicri:regionArea></wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26257761</idno><idno type="pmc">4511077</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4511077</idno><idno type="RBID">PMC:4511077</idno><idno type="doi">10.3389/fpls.2015.00556</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000074</idno><idno type="wicri:Area/Pmc/Curation">000074</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Mitogen-activated protein kinase cascades in <italic>Vitis vinifera</italic></title><author><name sortKey="Cak R, Birsen" sort="Cak R, Birsen" uniqKey="Cak R B" first="Birsen" last="Çak R">Birsen Çak R</name><affiliation wicri:level="1"><nlm:aff id="aff1"><institution>Department of Horticulture, Faculty of Agriculture, Ege University</institution><country>Izmir, Turkey</country></nlm:aff><country xml:lang="fr">Turquie</country><wicri:regionArea></wicri:regionArea></affiliation></author><author><name sortKey="K L Ckaya, Ozan" sort="K L Ckaya, Ozan" uniqKey="K L Ckaya O" first="Ozan" last="K L Çkaya">Ozan K L Çkaya</name><affiliation wicri:level="1"><nlm:aff id="aff2"><institution>Department of Pharmacetical Biotechnology, Faculty of Pharmacy, Cumhuriyet University</institution><country>Sivas, Turkey</country></nlm:aff><country xml:lang="fr">Turquie</country><wicri:regionArea></wicri:regionArea></affiliation></author></analytic><series><title level="j">Frontiers in Plant Science</title><idno type="eISSN">1664-462X</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Protein phosphorylation is one of the most important mechanisms to control cellular functions in response to external and endogenous signals. Mitogen-activated protein kinases (MAPK) are universal signaling molecules in eukaryotes that mediate the intracellular transmission of extracellular signals resulting in the induction of appropriate cellular responses. MAPK cascades are composed of four protein kinase modules: MAPKKK kinases (MAPKKKKs), MAPKK kinases (MAPKKKs), MAPK kinases (MAPKKs), and MAPKs. In plants, MAPKs are activated in response to abiotic stresses, wounding, and hormones, and during plant pathogen interactions and cell division. In this report, we performed a complete inventory of MAPK cascades genes in <italic>Vitis vinifera</italic>, the whole genome of which has been sequenced. By comparison with MAPK, MAPK kinases, MAPK kinase kinases and MAPK kinase kinase kinase kinase members of <italic>Arabidopsis thaliana</italic>, we revealed the existence of 14 MAPKs, 5 MAPKKs, 62 MAPKKKs, and 7 MAPKKKKs in <italic>Vitis vinifera</italic>. We identified orthologs of <italic>V. vinifera</italic> putative MAPKs in different species, and ESTs corresponding to members of MAPK cascades in various tissues. This work represents the first complete inventory of MAPK cascades in <italic>V. vinifera</italic> and could help elucidate the biological and physiological functions of these proteins in <italic>V. vinifera</italic>.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Altschul, S F" uniqKey="Altschul S">S. F. Altschul</name></author><author><name sortKey="Gish, W" uniqKey="Gish W">W. Gish</name></author><author><name sortKey="Miller, W" uniqKey="Miller W">W. Miller</name></author><author><name sortKey="Myers, E W" uniqKey="Myers E">E. W. Myers</name></author><author><name sortKey="Lipman, D J" uniqKey="Lipman D">D. J. Lipman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Asai, T" uniqKey="Asai T">T. 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Front Plant Sci</journal-id><journal-id journal-id-type="iso-abbrev">Front Plant Sci</journal-id><journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id><journal-title-group><journal-title>Frontiers in Plant Science</journal-title></journal-title-group><issn pub-type="epub">1664-462X</issn><publisher><publisher-name>Frontiers Media S.A.</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">26257761</article-id><article-id pub-id-type="pmc">4511077</article-id><article-id pub-id-type="doi">10.3389/fpls.2015.00556</article-id><article-categories><subj-group subj-group-type="heading"><subject>Plant Science</subject><subj-group><subject>Original Research</subject></subj-group></subj-group></article-categories><title-group><article-title>Mitogen-activated protein kinase cascades in <italic>Vitis vinifera</italic></article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Çakır</surname><given-names>Birsen</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="author-notes" rid="fn001"><sup>*</sup></xref><uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/144926/overview"></uri></contrib><contrib contrib-type="author"><name><surname>Kılıçkaya</surname><given-names>Ozan</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib></contrib-group><aff id="aff1"><sup>1</sup><institution>Department of Horticulture, Faculty of Agriculture, Ege University</institution><country>Izmir, Turkey</country></aff><aff id="aff2"><sup>2</sup><institution>Department of Pharmacetical Biotechnology, Faculty of Pharmacy, Cumhuriyet University</institution><country>Sivas, Turkey</country></aff><author-notes><fn fn-type="edited-by"><p>Edited by: Joanna Marie-France Cross, İnönü University, Turkey</p></fn><fn fn-type="edited-by"><p>Reviewed by: Matthew R. Willmann, University of Pennsylvania, USA; Pao-Yang Chen, Academia Sinica, Taiwan; Samia Daldoul, Center of Biotechnology of Borj Cedria, Tunisia</p></fn><corresp id="fn001">*Correspondence: Birsen Çakır, Department of Horticulture, Faculty of Agriculture, Ege University, Bornova/Izmir 35100, Turkey <email xlink:type="simple">birsencakir@hotmail.com</email></corresp><fn fn-type="other" id="fn002"><p>This article was submitted to Plant Genetics and Genomics, a section of the journal Frontiers in Plant Science</p></fn></author-notes><pub-date pub-type="epub"><day>22</day><month>7</month><year>2015</year></pub-date><pub-date pub-type="collection"><year>2015</year></pub-date><volume>6</volume><elocation-id>556</elocation-id><history><date date-type="received"><day>08</day><month>2</month><year>2015</year></date><date date-type="accepted"><day>07</day><month>7</month><year>2015</year></date></history><permissions><copyright-statement>Copyright © 2015 Çakır and Kılıçkaya.</copyright-statement><copyright-year>2015</copyright-year><copyright-holder>Çakır and Kılıçkaya</copyright-holder><license xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p></license></permissions><abstract><p>Protein phosphorylation is one of the most important mechanisms to control cellular functions in response to external and endogenous signals. Mitogen-activated protein kinases (MAPK) are universal signaling molecules in eukaryotes that mediate the intracellular transmission of extracellular signals resulting in the induction of appropriate cellular responses. MAPK cascades are composed of four protein kinase modules: MAPKKK kinases (MAPKKKKs), MAPKK kinases (MAPKKKs), MAPK kinases (MAPKKs), and MAPKs. In plants, MAPKs are activated in response to abiotic stresses, wounding, and hormones, and during plant pathogen interactions and cell division. In this report, we performed a complete inventory of MAPK cascades genes in <italic>Vitis vinifera</italic>, the whole genome of which has been sequenced. By comparison with MAPK, MAPK kinases, MAPK kinase kinases and MAPK kinase kinase kinase kinase members of <italic>Arabidopsis thaliana</italic>, we revealed the existence of 14 MAPKs, 5 MAPKKs, 62 MAPKKKs, and 7 MAPKKKKs in <italic>Vitis vinifera</italic>. We identified orthologs of <italic>V. vinifera</italic> putative MAPKs in different species, and ESTs corresponding to members of MAPK cascades in various tissues. This work represents the first complete inventory of MAPK cascades in <italic>V. vinifera</italic> and could help elucidate the biological and physiological functions of these proteins in <italic>V. vinifera</italic>.</p></abstract><kwd-group><kwd>MAP kinase</kwd><kwd><italic>Vitis vinifera</italic></kwd><kwd>signal transduction</kwd><kwd>protein phosphorylation</kwd></kwd-group><counts><fig-count count="5"></fig-count><table-count count="2"></table-count><equation-count count="0"></equation-count><ref-count count="96"></ref-count><page-count count="18"></page-count><word-count count="9968"></word-count></counts></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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