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Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe

Identifieur interne : 001164 ( Istex/Corpus ); précédent : 001163; suivant : 001165

Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe

Auteurs : Myriam Heuertz ; Jennifer Teufel ; Santiago C. González-Martínez ; Alvaro Soto ; Bruno Fady ; Ricardo Alía ; Giovanni G. Vendramin

Source :

RBID : ISTEX:51F2A62539839CC16363FAEAC6651A9E0761017D

English descriptors

Abstract

Aim  Our aims were to test whether morphological species of mountain pines were genetically supported in the western part of the distribution range of the Pinus mugo species complex (Pinus mugo Turra sensu lato), to resolve genetically homogeneous clusters of populations, to determine historical demographic processes, and to assess the potential hybridization of mountain pines with Scots pine, Pinus sylvestris L.

Url:
DOI: 10.1111/j.1365-2699.2009.02223.x

Links to Exploration step

ISTEX:51F2A62539839CC16363FAEAC6651A9E0761017D

Le document en format XML

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<div type="abstract">Aim  Our aims were to test whether morphological species of mountain pines were genetically supported in the western part of the distribution range of the Pinus mugo species complex (Pinus mugo Turra sensu lato), to resolve genetically homogeneous clusters of populations, to determine historical demographic processes, and to assess the potential hybridization of mountain pines with Scots pine, Pinus sylvestris L.</div>
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<title>Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe</title>
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<title level="a" type="main" xml:lang="en">Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe</title>
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<forename type="first">Myriam</forename>
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<email>myriamheuertz@gmx.net</email>
<note type="biography">These authors contributed equally to the present work.</note>
<affiliation>These authors contributed equally to the present work.</affiliation>
<affiliation>Evolutionary Biology and Ecology, Faculté des Sciences, Université Libre de Bruxelles, cp160/12, av. F.D. Roosevelt 50, 1050 Brussels, Belgium</affiliation>
<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
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<persName>
<forename type="first">Jennifer</forename>
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<note type="biography">These authors contributed equally to the present work.</note>
<affiliation>These authors contributed equally to the present work.</affiliation>
<affiliation>Öko‐Institut e.V., Institute for Applied Ecology, Postfach 6226, D‐79038 Freiburg, Germany</affiliation>
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<forename type="first">Santiago C.</forename>
<surname>González‐Martínez</surname>
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<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
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<forename type="first">Alvaro</forename>
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<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
<affiliation>U.D. Anatomía, Fisiología y Genética, Departamento Silvopascicultura, Universidad Politécnica de Madrid, E.T.S.I. de Montes, Ciudad Universitaria, s/n. 28040 Madrid, Spain</affiliation>
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<forename type="first">Bruno</forename>
<surname>Fady</surname>
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<affiliation>INRA, UR629, Ecologie des Forêts Méditerranéennes, Domaine St Paul, Site Agroparc, F‐84914 Avignon, France</affiliation>
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<surname>Alía</surname>
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<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
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<forename type="first">Giovanni G.</forename>
<surname>Vendramin</surname>
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<affiliation>Consiglio Nazionale delle Ricerche, Istituto di Genetica Vegetale, Via Madonna del Piano 10, 50019 Sesto Fiorentino (Firenze), Italy</affiliation>
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<p>Aim  Our aims were to test whether morphological species of mountain pines were genetically supported in the western part of the distribution range of the Pinus mugo species complex (Pinus mugo Turra sensu lato), to resolve genetically homogeneous clusters of populations, to determine historical demographic processes, and to assess the potential hybridization of mountain pines with Scots pine, Pinus sylvestris L.</p>
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<abstract>
<p>Location  Populations were sampled in the Iberian System, the Pyrenees, the French Mont Ventoux, Vosges and Jura mountains, the German Black Forest and throughout the Alps. This corresponded to a range‐wide sampling for mountain pine sensu stricto (Pinus uncinata Ram.) and to a sampling of the western parts of the ranges of dwarf mountain pine (Pinus mugo Turra sensu stricto) and bog pine/peatbog pine [Pinus rotundata Link/Pinus × pseudopumilio (Willk.) Beck].</p>
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<abstract>
<p>Methods  In total, 786 individuals of P. mugo sensu lato from 29 natural populations, and 85 individuals of P. sylvestris from four natural populations were genotyped at three chloroplast microsatellites (cpSSRs). Populations were characterized for standard genetic diversity statistics and signs of demographic expansion. Genetic structure was explored using analysis of molecular variance, differentiation statistics and Bayesian analysis of population structure (BAPS).</p>
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<abstract>
<p>Results  One hundred haplotypes were identified in P. mugo sensu lato. There was a stronger differentiation between geographical regions than between morphologically identified taxa (P. mugo sensu stricto, P. uncinata and P. rotundata/P. ×pseudopumilio). Overall genetic differentiation was weak (GST = 0.070) and displayed a clear phylogeographic structure [NST = 0.263, NST > NST (permuted), P < 0.001]. BAPS identified a Pyrenean and an Alpine gene pool, along with several smaller genetic clusters corresponding to peripheral populations.</p>
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<abstract>
<p>Main conclusions  The core regions of the Pyrenees and Alps were probably recolonized, respectively by P. uncinata and P. uncinata/P. mugo sensu stricto, from multiple glacial refugia that were well connected by pollen flow within the mountain chains. Pinus rotundata/P. × pseudopumilio populations from the Black Forest, Vosges and Jura mountains were probably recolonized from various glacial populations that kept their genetic distinctiveness despite late glacial and early Holocene expansion. Marginal P. uncinata populations from the Iberian System are compatible with elevational shifts and long‐term isolation. The causes of haplotype sharing between P. mugo sensu lato and P. sylvestris require further research.</p>
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</creators>
<affiliationGroup>
<affiliation xml:id="a1" countryCode="BE">
<unparsedAffiliation>Evolutionary Biology and Ecology, Faculté des Sciences, Université Libre de Bruxelles, cp160/12, av. F.D. Roosevelt 50, 1050 Brussels, Belgium</unparsedAffiliation>
</affiliation>
<affiliation xml:id="a2" countryCode="ES">
<unparsedAffiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</unparsedAffiliation>
</affiliation>
<affiliation xml:id="a3" countryCode="DE">
<unparsedAffiliation>Öko‐Institut e.V., Institute for Applied Ecology, Postfach 6226, D‐79038 Freiburg, Germany</unparsedAffiliation>
</affiliation>
<affiliation xml:id="a4" countryCode="ES">
<unparsedAffiliation>U.D. Anatomía, Fisiología y Genética, Departamento Silvopascicultura, Universidad Politécnica de Madrid, E.T.S.I. de Montes, Ciudad Universitaria, s/n. 28040 Madrid, Spain</unparsedAffiliation>
</affiliation>
<affiliation xml:id="a5" countryCode="US">
<unparsedAffiliation>INRA, UR629, Ecologie des Forêts Méditerranéennes, Domaine St Paul, Site Agroparc, F‐84914 Avignon, France</unparsedAffiliation>
</affiliation>
<affiliation xml:id="a6" countryCode="IT">
<unparsedAffiliation>Consiglio Nazionale delle Ricerche, Istituto di Genetica Vegetale, Via Madonna del Piano 10, 50019 Sesto Fiorentino (Firenze), Italy</unparsedAffiliation>
</affiliation>
</affiliationGroup>
<keywordGroup xml:lang="en">
<keyword xml:id="k1">Chloroplast microsatellites</keyword>
<keyword xml:id="k2">conservation</keyword>
<keyword xml:id="k3">genetic clusters</keyword>
<keyword xml:id="k4">haplotype sharing</keyword>
<keyword xml:id="k5">historical demography</keyword>
<keyword xml:id="k6">hybridization</keyword>
<keyword xml:id="k7">
<i>Pinus mugo</i>
complex</keyword>
<keyword xml:id="k8">
<i>Pinus sylvestris</i>
</keyword>
<keyword xml:id="k9">post‐glacial recolonization</keyword>
<keyword xml:id="k10">western Europe</keyword>
</keywordGroup>
<supportingInformation>
<p>
<b>Appendix S1</b>
Selection of cpSSR loci.</p>
<p>
<b>Table S1</b>
Haplotypes observed in the
<i>Pinus mugo</i>
species complex.</p>
<p>
<b>Table S2</b>
Haplotypes observed in
<i>Pinus sylvestris</i>
.</p>
<p>
<b>Table S3</b>
<i>Pinus mugo</i>
s.l
<i>.</i>
sequencing of cpSSR Pt41093.</p>
<p>
<b>Table S4</b>
Pairwise
<i>F</i>
<sub>ST</sub>
‐values between populations of the
<i>Pinus mugo</i>
species complex.</p>
<p>As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors.</p>
<supportingInfoItem>
<mediaResource alt="supporting info item" href="urn-x:wiley:03050270:media:jbi2223:JBI_2223_sm_Supporting-Information"></mediaResource>
<caption>Supporting info item</caption>
</supportingInfoItem>
</supportingInformation>
<abstractGroup>
<abstract type="main" xml:lang="en">
<title type="main">Abstract</title>
<p>
<b>Aim </b>
Our aims were to test whether morphological species of mountain pines were genetically supported in the western part of the distribution range of the
<i>Pinus mugo</i>
species complex (
<i>Pinus mugo</i>
Turra
<i>sensu lato</i>
), to resolve genetically homogeneous clusters of populations, to determine historical demographic processes, and to assess the potential hybridization of mountain pines with Scots pine,
<i>Pinus sylvestris</i>
L.</p>
<p>
<b>Location </b>
Populations were sampled in the Iberian System, the Pyrenees, the French Mont Ventoux, Vosges and Jura mountains, the German Black Forest and throughout the Alps. This corresponded to a range‐wide sampling for mountain pine
<i>sensu stricto</i>
(
<i>Pinus uncinata</i>
Ram.) and to a sampling of the western parts of the ranges of dwarf mountain pine (
<i>Pinus mugo</i>
Turra
<i>sensu stricto</i>
) and bog pine/peatbog pine [
<i>Pinus rotundata</i>
Link
<i>/Pinus</i>
<i>×</i>
<i>pseudopumilio</i>
(Willk.) Beck].</p>
<p>
<b>Methods </b>
In total, 786 individuals of
<i>P</i>
. 
<i>mugo sensu lato</i>
from 29 natural populations, and 85 individuals of
<i>P</i>
. 
<i>sylvestris</i>
from four natural populations were genotyped at three chloroplast microsatellites (cpSSRs). Populations were characterized for standard genetic diversity statistics and signs of demographic expansion. Genetic structure was explored using analysis of molecular variance, differentiation statistics and Bayesian analysis of population structure (BAPS).</p>
<p>
<b>Results </b>
One hundred haplotypes were identified in
<i>P</i>
. 
<i>mugo sensu lato</i>
. There was a stronger differentiation between geographical regions than between morphologically identified taxa (
<i>P</i>
.
<i>mugo sensu stricto</i>
,
<i>P</i>
. 
<i>uncinata</i>
and
<i>P</i>
. 
<i>rotundata/P</i>
. ×
<i>pseudopumilio</i>
). Overall genetic differentiation was weak (
<i>G</i>
<sub>ST</sub>
 = 0.070) and displayed a clear phylogeographic structure [
<i>N</i>
<sub>ST</sub>
 = 0.263,
<i>N</i>
<sub>ST</sub>
 > 
<i>N</i>
<sub>ST</sub>
(permuted),
<i>P</i>
<i><</i>
 0.001]. BAPS identified a Pyrenean and an Alpine gene pool, along with several smaller genetic clusters corresponding to peripheral populations.</p>
<p>
<b>Main conclusions </b>
The core regions of the Pyrenees and Alps were probably recolonized, respectively by
<i>P</i>
. 
<i>uncinata</i>
and
<i>P</i>
. 
<i>uncinata</i>
/
<i>P</i>
. 
<i>mugo sensu stricto</i>
, from multiple glacial refugia that were well connected by pollen flow within the mountain chains.
<i>Pinus rotundata/P</i>
. × 
<i>pseudopumilio</i>
populations from the Black Forest, Vosges and Jura mountains were probably recolonized from various glacial populations that kept their genetic distinctiveness despite late glacial and early Holocene expansion. Marginal
<i>P</i>
. 
<i>uncinata</i>
populations from the Iberian System are compatible with elevational shifts and long‐term isolation. The causes of haplotype sharing between
<i>P</i>
. 
<i>mugo sensu lato</i>
and
<i>P</i>
. 
<i>sylvestris</i>
require further research.</p>
</abstract>
</abstractGroup>
</contentMeta>
<noteGroup>
<note xml:id="fn1">
<p> These authors contributed equally to the present work.</p>
</note>
</noteGroup>
</header>
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<titleInfo lang="en">
<title>Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe</title>
</titleInfo>
<titleInfo type="abbreviated" lang="en">
<title>Phylogeography of mountain pines in western Europe</title>
</titleInfo>
<titleInfo type="alternative" contentType="CDATA" lang="en">
<title>Geography determines genetic relationships between species of mountain pine (Pinus mugo complex) in western Europe</title>
</titleInfo>
<name type="personal">
<namePart type="given">Myriam</namePart>
<namePart type="family">Heuertz</namePart>
<affiliation>Evolutionary Biology and Ecology, Faculté des Sciences, Université Libre de Bruxelles, cp160/12, av. F.D. Roosevelt 50, 1050 Brussels, Belgium</affiliation>
<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
<description>These authors contributed equally to the present work.</description>
<affiliation>E-mail: myriamheuertz@gmx.net</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Jennifer</namePart>
<namePart type="family">Teufel</namePart>
<affiliation>Öko‐Institut e.V., Institute for Applied Ecology, Postfach 6226, D‐79038 Freiburg, Germany</affiliation>
<description>These authors contributed equally to the present work.</description>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Santiago C.</namePart>
<namePart type="family">González‐Martínez</namePart>
<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Alvaro</namePart>
<namePart type="family">Soto</namePart>
<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
<affiliation>U.D. Anatomía, Fisiología y Genética, Departamento Silvopascicultura, Universidad Politécnica de Madrid, E.T.S.I. de Montes, Ciudad Universitaria, s/n. 28040 Madrid, Spain</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Bruno</namePart>
<namePart type="family">Fady</namePart>
<affiliation>INRA, UR629, Ecologie des Forêts Méditerranéennes, Domaine St Paul, Site Agroparc, F‐84914 Avignon, France</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Ricardo</namePart>
<namePart type="family">Alía</namePart>
<affiliation>Department of Forest Systems and Resources, Centre of Forest Research CIFOR‐INIA, Carretera de la Coruña km 7.5, 28040 Madrid, Spain</affiliation>
<role>
<roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal">
<namePart type="given">Giovanni G.</namePart>
<namePart type="family">Vendramin</namePart>
<affiliation>Consiglio Nazionale delle Ricerche, Istituto di Genetica Vegetale, Via Madonna del Piano 10, 50019 Sesto Fiorentino (Firenze), Italy</affiliation>
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<dateIssued encoding="w3cdtf">2010-03</dateIssued>
<copyrightDate encoding="w3cdtf">2010</copyrightDate>
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<abstract>Aim  Our aims were to test whether morphological species of mountain pines were genetically supported in the western part of the distribution range of the Pinus mugo species complex (Pinus mugo Turra sensu lato), to resolve genetically homogeneous clusters of populations, to determine historical demographic processes, and to assess the potential hybridization of mountain pines with Scots pine, Pinus sylvestris L.</abstract>
<abstract>Location  Populations were sampled in the Iberian System, the Pyrenees, the French Mont Ventoux, Vosges and Jura mountains, the German Black Forest and throughout the Alps. This corresponded to a range‐wide sampling for mountain pine sensu stricto (Pinus uncinata Ram.) and to a sampling of the western parts of the ranges of dwarf mountain pine (Pinus mugo Turra sensu stricto) and bog pine/peatbog pine [Pinus rotundata Link/Pinus × pseudopumilio (Willk.) Beck].</abstract>
<abstract>Methods  In total, 786 individuals of P. mugo sensu lato from 29 natural populations, and 85 individuals of P. sylvestris from four natural populations were genotyped at three chloroplast microsatellites (cpSSRs). Populations were characterized for standard genetic diversity statistics and signs of demographic expansion. Genetic structure was explored using analysis of molecular variance, differentiation statistics and Bayesian analysis of population structure (BAPS).</abstract>
<abstract>Results  One hundred haplotypes were identified in P. mugo sensu lato. There was a stronger differentiation between geographical regions than between morphologically identified taxa (P. mugo sensu stricto, P. uncinata and P. rotundata/P. ×pseudopumilio). Overall genetic differentiation was weak (GST = 0.070) and displayed a clear phylogeographic structure [NST = 0.263, NST > NST (permuted), P < 0.001]. BAPS identified a Pyrenean and an Alpine gene pool, along with several smaller genetic clusters corresponding to peripheral populations.</abstract>
<abstract>Main conclusions  The core regions of the Pyrenees and Alps were probably recolonized, respectively by P. uncinata and P. uncinata/P. mugo sensu stricto, from multiple glacial refugia that were well connected by pollen flow within the mountain chains. Pinus rotundata/P. × pseudopumilio populations from the Black Forest, Vosges and Jura mountains were probably recolonized from various glacial populations that kept their genetic distinctiveness despite late glacial and early Holocene expansion. Marginal P. uncinata populations from the Iberian System are compatible with elevational shifts and long‐term isolation. The causes of haplotype sharing between P. mugo sensu lato and P. sylvestris require further research.</abstract>
<subject lang="en">
<genre>keywords</genre>
<topic>Chloroplast microsatellites</topic>
<topic>conservation</topic>
<topic>genetic clusters</topic>
<topic>haplotype sharing</topic>
<topic>historical demography</topic>
<topic>hybridization</topic>
<topic>Pinus mugo complex</topic>
<topic>Pinus sylvestris</topic>
<topic>post‐glacial recolonization</topic>
<topic>western Europe</topic>
</subject>
<relatedItem type="host">
<titleInfo>
<title>Journal of Biogeography</title>
</titleInfo>
<genre type="journal">journal</genre>
<note type="content"> Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors. Appendix S1 Selection of cpSSR loci. Table S1 Haplotypes observed in the Pinus mugo species complex. Table S2 Haplotypes observed in Pinus sylvestris. Table S3 Pinus mugo s.l. sequencing of cpSSR Pt41093. Table S4 Pairwise FST‐values between populations of the Pinus mugo species complex. As a service to our authors and readers, this journal provides supporting information supplied by the authors. Such materials are peer‐reviewed and may be re‐organized for online delivery, but are not copy‐edited or typeset. Technical support issues arising from supporting information (other than missing files) should be addressed to the authors.Supporting Info Item: Supporting info item - </note>
<subject>
<genre>article-category</genre>
<topic>ORIGINAL ARTICLE</topic>
</subject>
<identifier type="ISSN">0305-0270</identifier>
<identifier type="eISSN">1365-2699</identifier>
<identifier type="DOI">10.1111/(ISSN)1365-2699</identifier>
<identifier type="PublisherID">JBI</identifier>
<part>
<date>2010</date>
<detail type="volume">
<caption>vol.</caption>
<number>37</number>
</detail>
<detail type="issue">
<caption>no.</caption>
<number>3</number>
</detail>
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<total>16</total>
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<identifier type="DOI">10.1111/j.1365-2699.2009.02223.x</identifier>
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<accessCondition type="use and reproduction" contentType="copyright">© 2009 Blackwell Publishing Ltd</accessCondition>
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