Contrasting Linguistic and Genetic Origins of the Asian Source Populations of Malagasy.
Identifieur interne : 001F19 ( PubMed/Corpus ); précédent : 001F18; suivant : 001F20Contrasting Linguistic and Genetic Origins of the Asian Source Populations of Malagasy.
Auteurs : Pradiptajati Kusuma ; Nicolas Brucato ; Murray P. Cox ; Denis Pierron ; Harilanto Razafindrazaka ; Alexander Adelaar ; Herawati Sudoyo ; Thierry Letellier ; François-Xavier RicautSource :
- Scientific reports [ 2045-2322 ] ; 2016.
Abstract
The Austronesian expansion, one of the last major human migrations, influenced regions as distant as tropical Asia, Remote Oceania and Madagascar, off the east coast of Africa. The identity of the Asian groups that settled Madagascar is particularly mysterious. While language connects Madagascar to the Ma'anyan of southern Borneo, haploid genetic data are more ambiguous. Here, we screened genome-wide diversity in 211 individuals from the Ma'anyan and surrounding groups in southern Borneo. Surprisingly, the Ma'anyan are characterized by a distinct, high frequency genomic component that is not found in Malagasy. This novel genetic layer occurs at low levels across Island Southeast Asia and hints at a more complex model for the Austronesian expansion in this region. In contrast, Malagasy show genomic links to a range of Island Southeast Asian groups, particularly from southern Borneo, but do not have a clear genetic connection with the Ma'anyan despite the obvious linguistic association.
DOI: 10.1038/srep26066
PubMed: 27188237
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Cox</name><affiliation><nlm:affiliation>Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.</nlm:affiliation></affiliation></author><author><name sortKey="Pierron, Denis" sort="Pierron, Denis" uniqKey="Pierron D" first="Denis" last="Pierron">Denis Pierron</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Razafindrazaka, Harilanto" sort="Razafindrazaka, Harilanto" uniqKey="Razafindrazaka H" first="Harilanto" last="Razafindrazaka">Harilanto Razafindrazaka</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Adelaar, Alexander" sort="Adelaar, Alexander" uniqKey="Adelaar A" first="Alexander" last="Adelaar">Alexander Adelaar</name><affiliation><nlm:affiliation>Asia Institute, University of Melbourne, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Sudoyo, Herawati" sort="Sudoyo, Herawati" uniqKey="Sudoyo H" first="Herawati" last="Sudoyo">Herawati Sudoyo</name><affiliation><nlm:affiliation>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia.</nlm:affiliation></affiliation></author><author><name sortKey="Letellier, Thierry" sort="Letellier, Thierry" uniqKey="Letellier T" first="Thierry" last="Letellier">Thierry Letellier</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Ricaut, Francois Xavier" sort="Ricaut, Francois Xavier" uniqKey="Ricaut F" first="François-Xavier" last="Ricaut">François-Xavier Ricaut</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2016">2016</date><idno type="RBID">pubmed:27188237</idno><idno type="pmid">27188237</idno><idno type="doi">10.1038/srep26066</idno><idno type="wicri:Area/PubMed/Corpus">001F19</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001F19</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Contrasting Linguistic and Genetic Origins of the Asian Source Populations of Malagasy.</title><author><name sortKey="Kusuma, Pradiptajati" sort="Kusuma, Pradiptajati" uniqKey="Kusuma P" first="Pradiptajati" last="Kusuma">Pradiptajati Kusuma</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Brucato, Nicolas" sort="Brucato, Nicolas" uniqKey="Brucato N" first="Nicolas" last="Brucato">Nicolas Brucato</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Cox, Murray P" sort="Cox, Murray P" uniqKey="Cox M" first="Murray P" last="Cox">Murray P. Cox</name><affiliation><nlm:affiliation>Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.</nlm:affiliation></affiliation></author><author><name sortKey="Pierron, Denis" sort="Pierron, Denis" uniqKey="Pierron D" first="Denis" last="Pierron">Denis Pierron</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Razafindrazaka, Harilanto" sort="Razafindrazaka, Harilanto" uniqKey="Razafindrazaka H" first="Harilanto" last="Razafindrazaka">Harilanto Razafindrazaka</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Adelaar, Alexander" sort="Adelaar, Alexander" uniqKey="Adelaar A" first="Alexander" last="Adelaar">Alexander Adelaar</name><affiliation><nlm:affiliation>Asia Institute, University of Melbourne, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Sudoyo, Herawati" sort="Sudoyo, Herawati" uniqKey="Sudoyo H" first="Herawati" last="Sudoyo">Herawati Sudoyo</name><affiliation><nlm:affiliation>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia.</nlm:affiliation></affiliation></author><author><name sortKey="Letellier, Thierry" sort="Letellier, Thierry" uniqKey="Letellier T" first="Thierry" last="Letellier">Thierry Letellier</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author><author><name sortKey="Ricaut, Francois Xavier" sort="Ricaut, Francois Xavier" uniqKey="Ricaut F" first="François-Xavier" last="Ricaut">François-Xavier Ricaut</name><affiliation><nlm:affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Scientific reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The Austronesian expansion, one of the last major human migrations, influenced regions as distant as tropical Asia, Remote Oceania and Madagascar, off the east coast of Africa. The identity of the Asian groups that settled Madagascar is particularly mysterious. While language connects Madagascar to the Ma'anyan of southern Borneo, haploid genetic data are more ambiguous. Here, we screened genome-wide diversity in 211 individuals from the Ma'anyan and surrounding groups in southern Borneo. Surprisingly, the Ma'anyan are characterized by a distinct, high frequency genomic component that is not found in Malagasy. This novel genetic layer occurs at low levels across Island Southeast Asia and hints at a more complex model for the Austronesian expansion in this region. In contrast, Malagasy show genomic links to a range of Island Southeast Asian groups, particularly from southern Borneo, but do not have a clear genetic connection with the Ma'anyan despite the obvious linguistic association.</div></front></TEI><pubmed><MedlineCitation Status="In-Data-Review" Owner="NLM"><PMID Version="1">27188237</PMID><DateCreated><Year>2016</Year><Month>05</Month><Day>18</Day></DateCreated><DateRevised><Year>2017</Year><Month>02</Month><Day>20</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2045-2322</ISSN><JournalIssue CitedMedium="Internet"><Volume>6</Volume><PubDate><Year>2016</Year><Month>May</Month><Day>18</Day></PubDate></JournalIssue><Title>Scientific reports</Title><ISOAbbreviation>Sci Rep</ISOAbbreviation></Journal><ArticleTitle>Contrasting Linguistic and Genetic Origins of the Asian Source Populations of Malagasy.</ArticleTitle><Pagination><MedlinePgn>26066</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/srep26066</ELocationID><Abstract><AbstractText>The Austronesian expansion, one of the last major human migrations, influenced regions as distant as tropical Asia, Remote Oceania and Madagascar, off the east coast of Africa. The identity of the Asian groups that settled Madagascar is particularly mysterious. While language connects Madagascar to the Ma'anyan of southern Borneo, haploid genetic data are more ambiguous. Here, we screened genome-wide diversity in 211 individuals from the Ma'anyan and surrounding groups in southern Borneo. Surprisingly, the Ma'anyan are characterized by a distinct, high frequency genomic component that is not found in Malagasy. This novel genetic layer occurs at low levels across Island Southeast Asia and hints at a more complex model for the Austronesian expansion in this region. In contrast, Malagasy show genomic links to a range of Island Southeast Asian groups, particularly from southern Borneo, but do not have a clear genetic connection with the Ma'anyan despite the obvious linguistic association.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kusuma</LastName><ForeName>Pradiptajati</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Brucato</LastName><ForeName>Nicolas</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cox</LastName><ForeName>Murray P</ForeName><Initials>MP</Initials><AffiliationInfo><Affiliation>Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pierron</LastName><ForeName>Denis</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Razafindrazaka</LastName><ForeName>Harilanto</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Adelaar</LastName><ForeName>Alexander</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Asia Institute, University of Melbourne, Melbourne, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sudoyo</LastName><ForeName>Herawati</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Letellier</LastName><ForeName>Thierry</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ricaut</LastName><ForeName>François-Xavier</ForeName><Initials>FX</Initials><AffiliationInfo><Affiliation>Evolutionary Medicine Group, Laboratoire d'Anthropologie Moléculaire et Imagerie de Synthèse UMR-5288, Université de Toulouse, Toulouse, France.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>05</Month><Day>18</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Sci Rep</MedlineTA><NlmUniqueID>101563288</NlmUniqueID><ISSNLinking>2045-2322</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Eur J Hum Genet. 2010 May;18(5):575-81</RefSource><PMID Version="1">20029456</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS 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