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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Phylogeny and ancient DNA of <italic>Sus</italic> provides insights into neolithic expansion in Island Southeast Asia and Oceania</title><author><name sortKey="Larson, Greger" sort="Larson, Greger" uniqKey="Larson G" first="Greger" last="Larson">Greger Larson</name><affiliation><nlm:aff id="aff1">Department of Medical Biochemistry and Microbiology, Uppsala University Biomedical Center, Box 597, 751 24 Uppsala, Sweden;</nlm:aff></affiliation><affiliation><nlm:aff id="aff25">Henry Wellcome Ancient Biomolecules Centre, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, United Kingdom</nlm:aff></affiliation></author><author><name sortKey="Cucchi, Thomas" sort="Cucchi, Thomas" uniqKey="Cucchi T" first="Thomas" last="Cucchi">Thomas Cucchi</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation><affiliation><nlm:aff wicri:cut="; and" id="aff24">Département Ecologie et Gestion de la Biodiversité, Unité Mixte de Recherche 5197, Muséum National d'Histoire Naturelle, 55 Rue Buffon, 75231 Paris Cedex 5, France</nlm:aff></affiliation></author><author><name sortKey="Fujita, Masakatsu" sort="Fujita, Masakatsu" uniqKey="Fujita M" first="Masakatsu" last="Fujita">Masakatsu Fujita</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Matisoo Smith, Elizabeth" sort="Matisoo Smith, Elizabeth" uniqKey="Matisoo Smith E" first="Elizabeth" last="Matisoo-Smith">Elizabeth Matisoo-Smith</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Robins, Judith" sort="Robins, Judith" uniqKey="Robins J" first="Judith" last="Robins">Judith Robins</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Anderson, Atholl" sort="Anderson, Atholl" uniqKey="Anderson A" first="Atholl" last="Anderson">Atholl Anderson</name><affiliation><nlm:aff wicri:cut=", and" id="aff5">Department of Archaeology and Natural History, Research School of Pacific and Asian Studies</nlm:aff></affiliation></author><author><name sortKey="Rolett, Barry" sort="Rolett, Barry" uniqKey="Rolett B" first="Barry" last="Rolett">Barry Rolett</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Spriggs, Matthew" sort="Spriggs, Matthew" uniqKey="Spriggs M" first="Matthew" last="Spriggs">Matthew Spriggs</name><affiliation><nlm:aff id="aff6">School of Archaeology and Anthropology, Faculty of Arts, The Australian National University, Canberra ACT 0200, Australia;</nlm:aff></affiliation></author><author><name sortKey="Dolman, Gaynor" sort="Dolman, Gaynor" uniqKey="Dolman G" first="Gaynor" last="Dolman">Gaynor Dolman</name><affiliation><nlm:aff id="aff7">Australian Centre for Ancient DNA, Earth, and Environmental Sciences, University of Adelaide, South Australia 5005, Australia;</nlm:aff></affiliation></author><author><name sortKey="Kim, Tae Hun" sort="Kim, Tae Hun" uniqKey="Kim T" first="Tae-Hun" last="Kim">Tae-Hun Kim</name><affiliation><nlm:aff id="aff8">Animal Genomics Laboratory, Animal Genomics and Bioinformatics Division, National Livestock Research Institute Rural Development Administration, 564 Omockchun-Dong, Gwonseon-Gu, Suwon 441-706, Korea;</nlm:aff></affiliation></author><author><name sortKey="Thuy, Nguyen Thi Dieu" sort="Thuy, Nguyen Thi Dieu" uniqKey="Thuy N" first="Nguyen Thi Dieu" last="Thuy">Nguyen Thi Dieu Thuy</name><affiliation><nlm:aff id="aff9">Institute of Biotechnology Vietnamese Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Ha Noi, Vietnam;</nlm:aff></affiliation></author><author><name sortKey="Randi, Ettore" sort="Randi, Ettore" uniqKey="Randi E" first="Ettore" last="Randi">Ettore Randi</name><affiliation><nlm:aff id="aff10">Laboratorio di Genetica, Istituto Nazionale per la Fauna Selvatica, Via Cà Fornacetta, 9, 40064 Ozzano Emilia Bologna, Italy;</nlm:aff></affiliation></author><author><name sortKey="Doherty, Moira" sort="Doherty, Moira" uniqKey="Doherty M" first="Moira" last="Doherty">Moira Doherty</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Due, Rokus Awe" sort="Due, Rokus Awe" uniqKey="Due R" first="Rokus Awe" last="Due">Rokus Awe Due</name><affiliation><nlm:aff id="aff11">Indonesian Centre for Archaeology, Jl. Raya Condet Pejaten 4, Jakarta 12001, Indonesia;</nlm:aff></affiliation></author><author><name sortKey="Bollt, Robert" sort="Bollt, Robert" uniqKey="Bollt R" first="Robert" last="Bollt">Robert Bollt</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Djubiantono, Tony" sort="Djubiantono, Tony" uniqKey="Djubiantono T" first="Tony" last="Djubiantono">Tony Djubiantono</name><affiliation><nlm:aff id="aff11">Indonesian Centre for Archaeology, Jl. Raya Condet Pejaten 4, Jakarta 12001, Indonesia;</nlm:aff></affiliation></author><author><name sortKey="Griffin, Bion" sort="Griffin, Bion" uniqKey="Griffin B" first="Bion" last="Griffin">Bion Griffin</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Intoh, Michiko" sort="Intoh, Michiko" uniqKey="Intoh M" first="Michiko" last="Intoh">Michiko Intoh</name><affiliation><nlm:aff id="aff12">Department of Social Research, National Museum of Ethnology, Osaka 565-8511, Japan;</nlm:aff></affiliation></author><author><name sortKey="Keane, Emile" sort="Keane, Emile" uniqKey="Keane E" first="Emile" last="Keane">Emile Keane</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Kirch, Patrick" sort="Kirch, Patrick" uniqKey="Kirch P" first="Patrick" last="Kirch">Patrick Kirch</name><affiliation><nlm:aff id="aff13">Department of Anthropology, University of California, 232 Kroeber Hall, Berkeley, CA 94720;</nlm:aff></affiliation></author><author><name sortKey="Li, Kuang Ti" sort="Li, Kuang Ti" uniqKey="Li K" first="Kuang-Ti" last="Li">Kuang-Ti Li</name><affiliation><nlm:aff id="aff14">Institute of History and Philology, Academia Sinica, Nankang, Taipei 11529, Taiwan;</nlm:aff></affiliation></author><author><name sortKey="Morwood, Michael" sort="Morwood, Michael" uniqKey="Morwood M" first="Michael" last="Morwood">Michael Morwood</name><affiliation><nlm:aff id="aff15">Department of Archaeology and Palaeoanthropology, School of Human and Environmental Studies, University of New England, Armidale, New South Wales 2351, Australia;</nlm:aff></affiliation></author><author><name sortKey="Pedri A, Lolita M" sort="Pedri A, Lolita M" uniqKey="Pedri A L" first="Lolita M." last="Pedri A">Lolita M. Pedri A</name><affiliation><nlm:aff id="aff16">Binirayan Hills, San Jose, Antique, Panay, Philippines;</nlm:aff></affiliation></author><author><name sortKey="Piper, Philip J" sort="Piper, Philip J" uniqKey="Piper P" first="Philip J." last="Piper">Philip J. Piper</name><affiliation><nlm:aff id="aff17">Centre for Palaeoecology and Evolution, Department of Archaeology, University of York, The King's Manor, York YO1 7EP, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Rabett, Ryan J" sort="Rabett, Ryan J" uniqKey="Rabett R" first="Ryan J." last="Rabett">Ryan J. Rabett</name><affiliation><nlm:aff id="aff18">The McDonald Institute for Archaeological Research, University of Cambridge, Downing Street, Cambridge CB2 3ER, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Shooter, Peter" sort="Shooter, Peter" uniqKey="Shooter P" first="Peter" last="Shooter">Peter Shooter</name><affiliation><nlm:aff id="aff23">107 Dunbar Street, Mount Gravatt East, Brisbane Q4122, Australia;</nlm:aff></affiliation></author><author><name sortKey="Van Den Bergh, Gert" sort="Van Den Bergh, Gert" uniqKey="Van Den Bergh G" first="Gert" last="Van Den Bergh">Gert Van Den Bergh</name><affiliation><nlm:aff id="aff19">Royal Netherlands Institute for Sea Research, NL-1790 AB Den Burg, Texel, The Netherlands;</nlm:aff></affiliation></author><author><name sortKey="West, Eric" sort="West, Eric" uniqKey="West E" first="Eric" last="West">Eric West</name><affiliation><nlm:aff id="aff20">Naval Facilities Engineering Command Pacific, 258 Makalapa Drive, Pearl Harbor, HI 96860;</nlm:aff></affiliation></author><author><name sortKey="Wickler, Stephen" sort="Wickler, Stephen" uniqKey="Wickler S" first="Stephen" last="Wickler">Stephen Wickler</name><affiliation><nlm:aff id="aff21">Department of Archaeology, Tromsø University Museum, N-9037 Tromsø, Norway;</nlm:aff></affiliation></author><author><name sortKey="Yuan, Jing" sort="Yuan, Jing" uniqKey="Yuan J" first="Jing" last="Yuan">Jing Yuan</name><affiliation><nlm:aff id="aff22">Research Centre for Archaeological Science, Institute of Archaeology, Chinese Academy of Social Sciences, Beijing 100710, China;</nlm:aff></affiliation></author><author><name sortKey="Cooper, Alan" sort="Cooper, Alan" uniqKey="Cooper A" first="Alan" last="Cooper">Alan Cooper</name><affiliation><nlm:aff id="aff7">Australian Centre for Ancient DNA, Earth, and Environmental Sciences, University of Adelaide, South Australia 5005, Australia;</nlm:aff></affiliation></author><author><name sortKey="Dobney, Keith" sort="Dobney, Keith" uniqKey="Dobney K" first="Keith" last="Dobney">Keith Dobney</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">17360400</idno><idno type="pmc">1829225</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1829225</idno><idno type="RBID">PMC:1829225</idno><idno type="doi">10.1073/pnas.0607753104</idno><date when="2007">2007</date><idno type="wicri:Area/Pmc/Corpus">001388</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001388</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Phylogeny and ancient DNA of <italic>Sus</italic> provides insights into neolithic expansion in Island Southeast Asia and Oceania</title><author><name sortKey="Larson, Greger" sort="Larson, Greger" uniqKey="Larson G" first="Greger" last="Larson">Greger Larson</name><affiliation><nlm:aff id="aff1">Department of Medical Biochemistry and Microbiology, Uppsala University Biomedical Center, Box 597, 751 24 Uppsala, Sweden;</nlm:aff></affiliation><affiliation><nlm:aff id="aff25">Henry Wellcome Ancient Biomolecules Centre, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, United Kingdom</nlm:aff></affiliation></author><author><name sortKey="Cucchi, Thomas" sort="Cucchi, Thomas" uniqKey="Cucchi T" first="Thomas" last="Cucchi">Thomas Cucchi</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation><affiliation><nlm:aff wicri:cut="; and" id="aff24">Département Ecologie et Gestion de la Biodiversité, Unité Mixte de Recherche 5197, Muséum National d'Histoire Naturelle, 55 Rue Buffon, 75231 Paris Cedex 5, France</nlm:aff></affiliation></author><author><name sortKey="Fujita, Masakatsu" sort="Fujita, Masakatsu" uniqKey="Fujita M" first="Masakatsu" last="Fujita">Masakatsu Fujita</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Matisoo Smith, Elizabeth" sort="Matisoo Smith, Elizabeth" uniqKey="Matisoo Smith E" first="Elizabeth" last="Matisoo-Smith">Elizabeth Matisoo-Smith</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Robins, Judith" sort="Robins, Judith" uniqKey="Robins J" first="Judith" last="Robins">Judith Robins</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Anderson, Atholl" sort="Anderson, Atholl" uniqKey="Anderson A" first="Atholl" last="Anderson">Atholl Anderson</name><affiliation><nlm:aff wicri:cut=", and" id="aff5">Department of Archaeology and Natural History, Research School of Pacific and Asian Studies</nlm:aff></affiliation></author><author><name sortKey="Rolett, Barry" sort="Rolett, Barry" uniqKey="Rolett B" first="Barry" last="Rolett">Barry Rolett</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Spriggs, Matthew" sort="Spriggs, Matthew" uniqKey="Spriggs M" first="Matthew" last="Spriggs">Matthew Spriggs</name><affiliation><nlm:aff id="aff6">School of Archaeology and Anthropology, Faculty of Arts, The Australian National University, Canberra ACT 0200, Australia;</nlm:aff></affiliation></author><author><name sortKey="Dolman, Gaynor" sort="Dolman, Gaynor" uniqKey="Dolman G" first="Gaynor" last="Dolman">Gaynor Dolman</name><affiliation><nlm:aff id="aff7">Australian Centre for Ancient DNA, Earth, and Environmental Sciences, University of Adelaide, South Australia 5005, Australia;</nlm:aff></affiliation></author><author><name sortKey="Kim, Tae Hun" sort="Kim, Tae Hun" uniqKey="Kim T" first="Tae-Hun" last="Kim">Tae-Hun Kim</name><affiliation><nlm:aff id="aff8">Animal Genomics Laboratory, Animal Genomics and Bioinformatics Division, National Livestock Research Institute Rural Development Administration, 564 Omockchun-Dong, Gwonseon-Gu, Suwon 441-706, Korea;</nlm:aff></affiliation></author><author><name sortKey="Thuy, Nguyen Thi Dieu" sort="Thuy, Nguyen Thi Dieu" uniqKey="Thuy N" first="Nguyen Thi Dieu" last="Thuy">Nguyen Thi Dieu Thuy</name><affiliation><nlm:aff id="aff9">Institute of Biotechnology Vietnamese Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Ha Noi, Vietnam;</nlm:aff></affiliation></author><author><name sortKey="Randi, Ettore" sort="Randi, Ettore" uniqKey="Randi E" first="Ettore" last="Randi">Ettore Randi</name><affiliation><nlm:aff id="aff10">Laboratorio di Genetica, Istituto Nazionale per la Fauna Selvatica, Via Cà Fornacetta, 9, 40064 Ozzano Emilia Bologna, Italy;</nlm:aff></affiliation></author><author><name sortKey="Doherty, Moira" sort="Doherty, Moira" uniqKey="Doherty M" first="Moira" last="Doherty">Moira Doherty</name><affiliation><nlm:aff id="aff3">Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</nlm:aff></affiliation></author><author><name sortKey="Due, Rokus Awe" sort="Due, Rokus Awe" uniqKey="Due R" first="Rokus Awe" last="Due">Rokus Awe Due</name><affiliation><nlm:aff id="aff11">Indonesian Centre for Archaeology, Jl. Raya Condet Pejaten 4, Jakarta 12001, Indonesia;</nlm:aff></affiliation></author><author><name sortKey="Bollt, Robert" sort="Bollt, Robert" uniqKey="Bollt R" first="Robert" last="Bollt">Robert Bollt</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Djubiantono, Tony" sort="Djubiantono, Tony" uniqKey="Djubiantono T" first="Tony" last="Djubiantono">Tony Djubiantono</name><affiliation><nlm:aff id="aff11">Indonesian Centre for Archaeology, Jl. Raya Condet Pejaten 4, Jakarta 12001, Indonesia;</nlm:aff></affiliation></author><author><name sortKey="Griffin, Bion" sort="Griffin, Bion" uniqKey="Griffin B" first="Bion" last="Griffin">Bion Griffin</name><affiliation><nlm:aff id="aff4">Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</nlm:aff></affiliation></author><author><name sortKey="Intoh, Michiko" sort="Intoh, Michiko" uniqKey="Intoh M" first="Michiko" last="Intoh">Michiko Intoh</name><affiliation><nlm:aff id="aff12">Department of Social Research, National Museum of Ethnology, Osaka 565-8511, Japan;</nlm:aff></affiliation></author><author><name sortKey="Keane, Emile" sort="Keane, Emile" uniqKey="Keane E" first="Emile" last="Keane">Emile Keane</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Kirch, Patrick" sort="Kirch, Patrick" uniqKey="Kirch P" first="Patrick" last="Kirch">Patrick Kirch</name><affiliation><nlm:aff id="aff13">Department of Anthropology, University of California, 232 Kroeber Hall, Berkeley, CA 94720;</nlm:aff></affiliation></author><author><name sortKey="Li, Kuang Ti" sort="Li, Kuang Ti" uniqKey="Li K" first="Kuang-Ti" last="Li">Kuang-Ti Li</name><affiliation><nlm:aff id="aff14">Institute of History and Philology, Academia Sinica, Nankang, Taipei 11529, Taiwan;</nlm:aff></affiliation></author><author><name sortKey="Morwood, Michael" sort="Morwood, Michael" uniqKey="Morwood M" first="Michael" last="Morwood">Michael Morwood</name><affiliation><nlm:aff id="aff15">Department of Archaeology and Palaeoanthropology, School of Human and Environmental Studies, University of New England, Armidale, New South Wales 2351, Australia;</nlm:aff></affiliation></author><author><name sortKey="Pedri A, Lolita M" sort="Pedri A, Lolita M" uniqKey="Pedri A L" first="Lolita M." last="Pedri A">Lolita M. Pedri A</name><affiliation><nlm:aff id="aff16">Binirayan Hills, San Jose, Antique, Panay, Philippines;</nlm:aff></affiliation></author><author><name sortKey="Piper, Philip J" sort="Piper, Philip J" uniqKey="Piper P" first="Philip J." last="Piper">Philip J. Piper</name><affiliation><nlm:aff id="aff17">Centre for Palaeoecology and Evolution, Department of Archaeology, University of York, The King's Manor, York YO1 7EP, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Rabett, Ryan J" sort="Rabett, Ryan J" uniqKey="Rabett R" first="Ryan J." last="Rabett">Ryan J. Rabett</name><affiliation><nlm:aff id="aff18">The McDonald Institute for Archaeological Research, University of Cambridge, Downing Street, Cambridge CB2 3ER, United Kingdom;</nlm:aff></affiliation></author><author><name sortKey="Shooter, Peter" sort="Shooter, Peter" uniqKey="Shooter P" first="Peter" last="Shooter">Peter Shooter</name><affiliation><nlm:aff id="aff23">107 Dunbar Street, Mount Gravatt East, Brisbane Q4122, Australia;</nlm:aff></affiliation></author><author><name sortKey="Van Den Bergh, Gert" sort="Van Den Bergh, Gert" uniqKey="Van Den Bergh G" first="Gert" last="Van Den Bergh">Gert Van Den Bergh</name><affiliation><nlm:aff id="aff19">Royal Netherlands Institute for Sea Research, NL-1790 AB Den Burg, Texel, The Netherlands;</nlm:aff></affiliation></author><author><name sortKey="West, Eric" sort="West, Eric" uniqKey="West E" first="Eric" last="West">Eric West</name><affiliation><nlm:aff id="aff20">Naval Facilities Engineering Command Pacific, 258 Makalapa Drive, Pearl Harbor, HI 96860;</nlm:aff></affiliation></author><author><name sortKey="Wickler, Stephen" sort="Wickler, Stephen" uniqKey="Wickler S" first="Stephen" last="Wickler">Stephen Wickler</name><affiliation><nlm:aff id="aff21">Department of Archaeology, Tromsø University Museum, N-9037 Tromsø, Norway;</nlm:aff></affiliation></author><author><name sortKey="Yuan, Jing" sort="Yuan, Jing" uniqKey="Yuan J" first="Jing" last="Yuan">Jing Yuan</name><affiliation><nlm:aff id="aff22">Research Centre for Archaeological Science, Institute of Archaeology, Chinese Academy of Social Sciences, Beijing 100710, China;</nlm:aff></affiliation></author><author><name sortKey="Cooper, Alan" sort="Cooper, Alan" uniqKey="Cooper A" first="Alan" last="Cooper">Alan Cooper</name><affiliation><nlm:aff id="aff7">Australian Centre for Ancient DNA, Earth, and Environmental Sciences, University of Adelaide, South Australia 5005, Australia;</nlm:aff></affiliation></author><author><name sortKey="Dobney, Keith" sort="Dobney, Keith" uniqKey="Dobney K" first="Keith" last="Dobney">Keith Dobney</name><affiliation><nlm:aff id="aff2">Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</nlm:aff></affiliation></author></analytic><series><title level="j">Proceedings of the National Academy of Sciences of the United States of America</title><idno type="ISSN">0027-8424</idno><idno type="eISSN">1091-6490</idno><imprint><date when="2007">2007</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Human settlement of Oceania marked the culmination of a global colonization process that began when humans first left Africa at least 90,000 years ago. The precise origins and dispersal routes of the Austronesian peoples and the associated Lapita culture remain contentious, and numerous disparate models of dispersal (based primarily on linguistic, genetic, and archeological data) have been proposed. Here, through the use of mtDNA from 781 modern and ancient <italic>Sus</italic> specimens, we provide evidence for an early human-mediated translocation of the Sulawesi warty pig (<italic>Sus celebensis</italic>) to Flores and Timor and two later separate human-mediated dispersals of domestic pig (<italic>Sus scrofa</italic>) through Island Southeast Asia into Oceania. Of the later dispersal routes, one is unequivocally associated with the Neolithic (Lapita) and later Polynesian migrations and links modern and archeological Javan, Sumatran, Wallacean, and Oceanic pigs with mainland Southeast Asian <italic>S. scrofa</italic>. Archeological and genetic evidence shows these pigs were certainly introduced to islands east of the Wallace Line, including New Guinea, and that so-called “wild” pigs within this region are most likely feral descendants of domestic pigs introduced by early agriculturalists. The other later pig dispersal links mainland East Asian pigs to western Micronesia, Taiwan, and the Philippines. These results provide important data with which to test current models for human dispersal in the region.</p></div></front></TEI><pmc article-type="research-article" xml:lang="EN"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Proc Natl Acad Sci U S A</journal-id><journal-id journal-id-type="pmc">pnas</journal-id><journal-id journal-id-type="publisher-id">PNAS</journal-id><journal-title>Proceedings of the National Academy of Sciences of the United States of America</journal-title><issn pub-type="ppub">0027-8424</issn><issn pub-type="epub">1091-6490</issn><publisher><publisher-name>National Academy of Sciences</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">17360400</article-id><article-id pub-id-type="pmc">1829225</article-id><article-id pub-id-type="publisher-id">5654</article-id><article-id pub-id-type="doi">10.1073/pnas.0607753104</article-id><article-categories><subj-group subj-group-type="heading"><subject>Biological Sciences</subject><subj-group><subject>Anthropology</subject></subj-group></subj-group><subj-group><subject>Social Sciences</subject><subj-group><subject>Anthropology</subject></subj-group></subj-group></article-categories><title-group><article-title>Phylogeny and ancient DNA of <italic>Sus</italic> provides insights into neolithic expansion in Island Southeast Asia and Oceania</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Larson</surname><given-names>Greger</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref><xref ref-type="corresp" rid="cor1"><sup>b</sup></xref><xref ref-type="aff" rid="aff25"><sup>z</sup></xref></contrib><contrib contrib-type="author"><name><surname>Cucchi</surname><given-names>Thomas</given-names></name><xref ref-type="aff" rid="aff2"><sup>c</sup></xref><xref ref-type="aff" rid="aff24"><sup>d</sup></xref></contrib><contrib contrib-type="author"><name><surname>Fujita</surname><given-names>Masakatsu</given-names></name><xref ref-type="aff" rid="aff2"><sup>c</sup></xref></contrib><contrib contrib-type="author"><name><surname>Matisoo-Smith</surname><given-names>Elizabeth</given-names></name><xref ref-type="aff" rid="aff3"><sup>e</sup></xref></contrib><contrib contrib-type="author"><name><surname>Robins</surname><given-names>Judith</given-names></name><xref ref-type="aff" rid="aff3"><sup>e</sup></xref></contrib><contrib contrib-type="author"><name><surname>Anderson</surname><given-names>Atholl</given-names></name><xref ref-type="aff" rid="aff5"><sup>f</sup></xref></contrib><contrib contrib-type="author"><name><surname>Rolett</surname><given-names>Barry</given-names></name><xref ref-type="aff" rid="aff4"><sup>g</sup></xref></contrib><contrib contrib-type="author"><name><surname>Spriggs</surname><given-names>Matthew</given-names></name><xref ref-type="aff" rid="aff6"><sup>h</sup></xref></contrib><contrib contrib-type="author"><name><surname>Dolman</surname><given-names>Gaynor</given-names></name><xref ref-type="aff" rid="aff7"><sup>i</sup></xref></contrib><contrib contrib-type="author"><name><surname>Kim</surname><given-names>Tae-Hun</given-names></name><xref ref-type="aff" rid="aff8"><sup>j</sup></xref></contrib><contrib contrib-type="author"><name><surname>Thuy</surname><given-names>Nguyen Thi Dieu</given-names></name><xref ref-type="aff" rid="aff9"><sup>k</sup></xref></contrib><contrib contrib-type="author"><name><surname>Randi</surname><given-names>Ettore</given-names></name><xref ref-type="aff" rid="aff10"><sup>l</sup></xref></contrib><contrib contrib-type="author"><name><surname>Doherty</surname><given-names>Moira</given-names></name><xref ref-type="aff" rid="aff3"><sup>e</sup></xref></contrib><contrib contrib-type="author"><name><surname>Due</surname><given-names>Rokus Awe</given-names></name><xref ref-type="aff" rid="aff11"><sup>m</sup></xref></contrib><contrib contrib-type="author"><name><surname>Bollt</surname><given-names>Robert</given-names></name><xref ref-type="aff" rid="aff4"><sup>g</sup></xref></contrib><contrib contrib-type="author"><name><surname>Djubiantono</surname><given-names>Tony</given-names></name><xref ref-type="aff" rid="aff11"><sup>m</sup></xref></contrib><contrib contrib-type="author"><name><surname>Griffin</surname><given-names>Bion</given-names></name><xref ref-type="aff" rid="aff4"><sup>g</sup></xref></contrib><contrib contrib-type="author"><name><surname>Intoh</surname><given-names>Michiko</given-names></name><xref ref-type="aff" rid="aff12"><sup>n</sup></xref></contrib><contrib contrib-type="author"><name><surname>Keane</surname><given-names>Emile</given-names></name><xref ref-type="aff" rid="aff2"><sup>c</sup></xref></contrib><contrib contrib-type="author"><name><surname>Kirch</surname><given-names>Patrick</given-names></name><xref ref-type="aff" rid="aff13"><sup>o</sup></xref></contrib><contrib contrib-type="author"><name><surname>Li</surname><given-names>Kuang-Ti</given-names></name><xref ref-type="aff" rid="aff14"><sup>p</sup></xref></contrib><contrib contrib-type="author"><name><surname>Morwood</surname><given-names>Michael</given-names></name><xref ref-type="aff" rid="aff15"><sup>q</sup></xref></contrib><contrib contrib-type="author"><name><surname>Pedriña</surname><given-names>Lolita M.</given-names></name><xref ref-type="aff" rid="aff16"><sup>r</sup></xref></contrib><contrib contrib-type="author"><name><surname>Piper</surname><given-names>Philip J.</given-names></name><xref ref-type="aff" rid="aff17"><sup>s</sup></xref></contrib><contrib contrib-type="author"><name><surname>Rabett</surname><given-names>Ryan J.</given-names></name><xref ref-type="aff" rid="aff18"><sup>t</sup></xref></contrib><contrib contrib-type="author"><name><surname>Shooter</surname><given-names>Peter</given-names></name><xref ref-type="aff" rid="aff23"><sup>u</sup></xref></contrib><contrib contrib-type="author"><name><surname>Van den Bergh</surname><given-names>Gert</given-names></name><xref ref-type="aff" rid="aff19"><sup>v</sup></xref></contrib><contrib contrib-type="author"><name><surname>West</surname><given-names>Eric</given-names></name><xref ref-type="aff" rid="aff20"><sup>w</sup></xref></contrib><contrib contrib-type="author"><name><surname>Wickler</surname><given-names>Stephen</given-names></name><xref ref-type="aff" rid="aff21"><sup>x</sup></xref></contrib><contrib contrib-type="author"><name><surname>Yuan</surname><given-names>Jing</given-names></name><xref ref-type="aff" rid="aff22"><sup>y</sup></xref></contrib><contrib contrib-type="author"><name><surname>Cooper</surname><given-names>Alan</given-names></name><xref ref-type="aff" rid="aff7"><sup>i</sup></xref></contrib><contrib contrib-type="author"><name><surname>Dobney</surname><given-names>Keith</given-names></name><xref ref-type="corresp" rid="cor1"><sup>b</sup></xref><xref ref-type="aff" rid="aff2"><sup>c</sup></xref></contrib><aff id="aff1"><sup>a</sup>Department of Medical Biochemistry and Microbiology, Uppsala University Biomedical Center, Box 597, 751 24 Uppsala, Sweden;</aff><aff id="aff2"><sup>c</sup>Department of Archaeology, University of Durham, South Road, Durham DH1 3L, United Kingdom;</aff><aff id="aff3"><sup>e</sup>Department of Anthropology and Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, P.O. Box 92019, Auckland, New Zealand;</aff><aff id="aff4"><sup>g</sup>Department of Anthropology, University of Hawaii, 2424 Maile Way, Honolulu, HI 96822;</aff><aff id="aff5"><sup>f</sup>Department of Archaeology and Natural History, Research School of Pacific and Asian Studies, and</aff><aff id="aff6"><sup>h</sup>School of Archaeology and Anthropology, Faculty of Arts, The Australian National University, Canberra ACT 0200, Australia;</aff><aff id="aff7"><sup>i</sup>Australian Centre for Ancient DNA, Earth, and Environmental Sciences, University of Adelaide, South Australia 5005, Australia;</aff><aff id="aff8"><sup>j</sup>Animal Genomics Laboratory, Animal Genomics and Bioinformatics Division, National Livestock Research Institute Rural Development Administration, 564 Omockchun-Dong, Gwonseon-Gu, Suwon 441-706, Korea;</aff><aff id="aff9"><sup>k</sup>Institute of Biotechnology Vietnamese Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay, Ha Noi, Vietnam;</aff><aff id="aff10"><sup>l</sup>Laboratorio di Genetica, Istituto Nazionale per la Fauna Selvatica, Via Cà Fornacetta, 9, 40064 Ozzano Emilia Bologna, Italy;</aff><aff id="aff11"><sup>m</sup>Indonesian Centre for Archaeology, Jl. Raya Condet Pejaten 4, Jakarta 12001, Indonesia;</aff><aff id="aff12"><sup>n</sup>Department of Social Research, National Museum of Ethnology, Osaka 565-8511, Japan;</aff><aff id="aff13"><sup>o</sup>Department of Anthropology, University of California, 232 Kroeber Hall, Berkeley, CA 94720;</aff><aff id="aff14"><sup>p</sup>Institute of History and Philology, Academia Sinica, Nankang, Taipei 11529, Taiwan;</aff><aff id="aff15"><sup>q</sup>Department of Archaeology and Palaeoanthropology, School of Human and Environmental Studies, University of New England, Armidale, New South Wales 2351, Australia;</aff><aff id="aff16"><sup>r</sup>Binirayan Hills, San Jose, Antique, Panay, Philippines;</aff><aff id="aff17"><sup>s</sup>Centre for Palaeoecology and Evolution, Department of Archaeology, University of York, The King's Manor, York YO1 7EP, United Kingdom;</aff><aff id="aff18"><sup>t</sup>The McDonald Institute for Archaeological Research, University of Cambridge, Downing Street, Cambridge CB2 3ER, United Kingdom;</aff><aff id="aff19"><sup>v</sup>Royal Netherlands Institute for Sea Research, NL-1790 AB Den Burg, Texel, The Netherlands;</aff><aff id="aff20"><sup>w</sup>Naval Facilities Engineering Command Pacific, 258 Makalapa Drive, Pearl Harbor, HI 96860;</aff><aff id="aff21"><sup>x</sup>Department of Archaeology, Tromsø University Museum, N-9037 Tromsø, Norway;</aff><aff id="aff22"><sup>y</sup>Research Centre for Archaeological Science, Institute of Archaeology, Chinese Academy of Social Sciences, Beijing 100710, China;</aff><aff id="aff23"><sup>u</sup>107 Dunbar Street, Mount Gravatt East, Brisbane Q4122, Australia;</aff><aff id="aff24"><sup>d</sup>Département Ecologie et Gestion de la Biodiversité, Unité Mixte de Recherche 5197, Muséum National d'Histoire Naturelle, 55 Rue Buffon, 75231 Paris Cedex 5, France; and</aff><aff id="aff25"><sup>z</sup>Henry Wellcome Ancient Biomolecules Centre, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, United Kingdom</aff></contrib-group><author-notes><corresp id="cor1"><sup>b</sup>To whom correspondence may be addressed. E-mail: <email>greger.larson@imbim.uu.se</email> or <email>k.m.dobney@durham.ac.uk</email></corresp><fn fn-type="edited-by"><p>Edited by Barbara A. Schaal, Washington University, St. Louis, MO, and approved February 2, 2007</p></fn><fn fn-type="con"><p>Author contributions: K.D. designed research; G.L., T.C., M.F., E.M.-S., J.R., G.D., T.-H.K., N.T.D.T., E.R., A.C., and K.D. performed research; A.A., B.R., M.S., M.D., R.A.D., R.B., T.D., B.G., M.I., E.K., P.K., K.-T.L., M.M., L.M.P., P.J.P., R.J.R., P.S., G.V.d.B., E.W., S.W., and J.Y. contributed new reagents/analytic tools; G.L., T.C., M.F., E.M.-S., J.R., T.-H.K., N.T.D.T., E.R., A.C., and K.D. analyzed data; and G.L., T.C., E.M.-S., A.A., B.R., M.S., M.D., R.A.D., R.B., T.D., B.G., M.I., E.K., P.K., K.-T.L., M.M., L.M.P., P.J.P., R.J.R., P.S., G.V.d.B., E.W., S.W., J.Y., A.C., and K.D. wrote the paper.</p></fn></author-notes><pub-date pub-type="ppub"><day>20</day><month>3</month><year>2007</year></pub-date><pub-date pub-type="epub"><day>14</day><month>3</month><year>2007</year></pub-date><volume>104</volume><issue>12</issue><fpage>4834</fpage><lpage>4839</lpage><history><date date-type="received"><day>5</day><month>9</month><year>2006</year></date></history><copyright-statement>© 2007 by The National Academy of Sciences of the USA</copyright-statement><copyright-year>2007</copyright-year><self-uri xlink:title="pdf" xlink:href="zpq01207004834.pdf"></self-uri><abstract><p>Human settlement of Oceania marked the culmination of a global colonization process that began when humans first left Africa at least 90,000 years ago. The precise origins and dispersal routes of the Austronesian peoples and the associated Lapita culture remain contentious, and numerous disparate models of dispersal (based primarily on linguistic, genetic, and archeological data) have been proposed. Here, through the use of mtDNA from 781 modern and ancient <italic>Sus</italic> specimens, we provide evidence for an early human-mediated translocation of the Sulawesi warty pig (<italic>Sus celebensis</italic>) to Flores and Timor and two later separate human-mediated dispersals of domestic pig (<italic>Sus scrofa</italic>) through Island Southeast Asia into Oceania. Of the later dispersal routes, one is unequivocally associated with the Neolithic (Lapita) and later Polynesian migrations and links modern and archeological Javan, Sumatran, Wallacean, and Oceanic pigs with mainland Southeast Asian <italic>S. scrofa</italic>. Archeological and genetic evidence shows these pigs were certainly introduced to islands east of the Wallace Line, including New Guinea, and that so-called “wild” pigs within this region are most likely feral descendants of domestic pigs introduced by early agriculturalists. The other later pig dispersal links mainland East Asian pigs to western Micronesia, Taiwan, and the Philippines. These results provide important data with which to test current models for human dispersal in the region.</p></abstract><kwd-group><kwd>domestication</kwd><kwd>mtDNA</kwd><kwd>Pacific colonization</kwd><kwd>phylogeography</kwd></kwd-group><custom-meta-wrap><custom-meta><meta-name>PDF</meta-name><meta-value><uri xlink:type="simple" xlink:href="zpq01207004834.pdf"></uri></meta-value></custom-meta></custom-meta-wrap></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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