AustralieFrV1, Ncbi, Curation, bibRecord, 001949

The quail anatomy portal

Identifieur interne : 001949 ( Ncbi/Curation ); précédent : 001948; suivant : 001950

The quail anatomy portal

Auteurs : Avnika A. Ruparelia [Australie] ; Johanna E. Simkin [Australie] ; David Salgado [Australie, France] ; Donald F. Newgreen [Australie] ; Gabriel G. Martins [Portugal] ; Robert J. Bryson-Richardson [Australie]

Source :

Database: The Journal of Biological Databases and Curation [ 1758-0463 ] ; 2014.

RBID : PMC:3978374

Descripteurs français

KwdFr :
- Animaux, Bases de données factuelles, Caille (anatomie et histologie), Femelle, Imagerie tridimensionnelle (), Infographie, Logiciel, Mâle.
MESH :
- anatomie et histologie : Caille.
- Animaux, Bases de données factuelles, Femelle, Imagerie tridimensionnelle, Infographie, Logiciel, Mâle.

English descriptors

KwdEn :
- Animals, Computer Graphics, Databases, Factual, Female, Imaging, Three-Dimensional (methods), Male, Quail (anatomy & histology), Software.
MESH :
- anatomy & histology : Quail.
- methods : Imaging, Three-Dimensional.
- Animals, Computer Graphics, Databases, Factual, Female, Male, Software.

Abstract

The Japanese quail is a widely used model organism for the study of embryonic development; however, anatomical resources are lacking. The Quail Anatomy Portal (QAP) provides 22 detailed three-dimensional (3D) models of quail embryos during development from embryonic day (E)1 to E15 generated using optical projection tomography. The 3D models provided can be virtually sectioned to investigate anatomy. Furthermore, using the 3D nature of the models, we have generated a tool to assist in the staging of quail samples. Volume renderings of each stage are provided and can be rotated to allow visualization from multiple angles allowing easy comparison of features both between stages in the database and between images or samples in the laboratory. The use of JavaScript, PHP and HTML ensure the database is accessible to users across different operating systems, including mobile devices, facilitating its use in the laboratory.The QAP provides a unique resource for researchers using the quail model. The ability to virtually section anatomical models throughout development provides the opportunity for researchers to virtually dissect the quail and also provides a valuable tool for the education of students and researchers new to the field.

Database URL: http://quail.anatomyportal.org

(For review username: demo, password: quail123)

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978374

DOI: 10.1093/database/bau028
PubMed: 24715219
PubMed Central: 3978374

Links toward previous steps (curation, corpus...)

to stream Pmc, to step Corpus: Pour aller vers cette notice dans l'étape Curation :002398
to stream Pmc, to step Curation: Pour aller vers cette notice dans l'étape Curation :002248
to stream Pmc, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :001291
to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :003844
to stream PubMed, to step Curation: Pour aller vers cette notice dans l'étape Curation :003730
to stream PubMed, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :003730
to stream Ncbi, to step Merge: Pour aller vers cette notice dans l'étape Curation :001949

Links to Exploration step

PMC:3978374

Le document en format XML

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<author><name sortKey="Newgreen, Donald F" sort="Newgreen, Donald F" uniqKey="Newgreen D" first="Donald F." last="Newgreen">Donald F. Newgreen</name>
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<term>Computer Graphics</term>
<term>Databases, Factual</term>
<term>Female</term>
<term>Imaging, Three-Dimensional (methods)</term>
<term>Male</term>
<term>Quail (anatomy & histology)</term>
<term>Software</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term>
<term>Bases de données factuelles</term>
<term>Caille (anatomie et histologie)</term>
<term>Femelle</term>
<term>Imagerie tridimensionnelle ()</term>
<term>Infographie</term>
<term>Logiciel</term>
<term>Mâle</term>
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<term>Computer Graphics</term>
<term>Databases, Factual</term>
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<term>Male</term>
<term>Software</term>
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<term>Bases de données factuelles</term>
<term>Femelle</term>
<term>Imagerie tridimensionnelle</term>
<term>Infographie</term>
<term>Logiciel</term>
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<front><div type="abstract" xml:lang="en"><p>The Japanese quail is a widely used model organism for the study of embryonic development; however, anatomical resources are lacking. The Quail Anatomy Portal (QAP) provides 22 detailed three-dimensional (3D) models of quail embryos during development from embryonic day (E)1 to E15 generated using optical projection tomography. The 3D models provided can be virtually sectioned to investigate anatomy. Furthermore, using the 3D nature of the models, we have generated a tool to assist in the staging of quail samples. Volume renderings of each stage are provided and can be rotated to allow visualization from multiple angles allowing easy comparison of features both between stages in the database and between images or samples in the laboratory. The use of JavaScript, PHP and HTML ensure the database is accessible to users across different operating systems, including mobile devices, facilitating its use in the laboratory.The QAP provides a unique resource for researchers using the quail model. The ability to virtually section anatomical models throughout development provides the opportunity for researchers to virtually dissect the quail and also provides a valuable tool for the education of students and researchers new to the field.</p>
<p><bold>Database URL</bold>
: <ext-link ext-link-type="uri" xlink:href="http://quail.anatomyportal.org">http://quail.anatomyportal.org</ext-link>
</p>
<p>(For review username: demo, password: quail123)</p>
</div>
</front>
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The quail anatomy portal

The quail anatomy portal

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

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