The 2013 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection
Identifieur interne : 000171 ( Ncbi/Merge ); précédent : 000170; suivant : 000172The 2013 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection
Auteurs : Xosé M. Fernández-Suárez [Royaume-Uni] ; Michael Y. Galperin [États-Unis]Source :
- Nucleic Acids Research [ 0305-1048 ] ; 2012.
Abstract
The 20th annual Database Issue of
Url:
DOI: 10.1093/nar/gks1297
PubMed: 23203983
PubMed Central: 3531151
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PMC:3531151Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">The 2013 <italic>Nucleic Acids Research</italic> Database Issue and the online Molecular Biology Database Collection</title><author><name sortKey="Fernandez Suarez, Xose M" sort="Fernandez Suarez, Xose M" uniqKey="Fernandez Suarez X" first="Xosé M." last="Fernández-Suárez">Xosé M. Fernández-Suárez</name><affiliation wicri:level="1"><nlm:aff wicri:cut=" and" id="gks1297-AFF1">Cambridge, CB24 6DZ, UK</nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Cambridge, CB24 6DZ</wicri:regionArea><wicri:noRegion>CB24 6DZ</wicri:noRegion></affiliation></author><author><name sortKey="Galperin, Michael Y" sort="Galperin, Michael Y" uniqKey="Galperin M" first="Michael Y." last="Galperin">Michael Y. Galperin</name><affiliation wicri:level="2"><nlm:aff id="gks1297-AFF1">National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health (NIH), Bethesda, MD 20894, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health (NIH), Bethesda, MD 20894</wicri:regionArea><placeName><region type="state">Maryland</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23203983</idno><idno type="pmc">3531151</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531151</idno><idno type="RBID">PMC:3531151</idno><idno type="doi">10.1093/nar/gks1297</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000124</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000124</idno><idno type="wicri:Area/Pmc/Curation">000124</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000124</idno><idno type="wicri:Area/Pmc/Checkpoint">000088</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000088</idno><idno type="wicri:Area/Ncbi/Merge">000171</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">The 2013 <italic>Nucleic Acids Research</italic> Database Issue and the online Molecular Biology Database Collection</title><author><name sortKey="Fernandez Suarez, Xose M" sort="Fernandez Suarez, Xose M" uniqKey="Fernandez Suarez X" first="Xosé M." last="Fernández-Suárez">Xosé M. Fernández-Suárez</name><affiliation wicri:level="1"><nlm:aff wicri:cut=" and" id="gks1297-AFF1">Cambridge, CB24 6DZ, UK</nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Cambridge, CB24 6DZ</wicri:regionArea><wicri:noRegion>CB24 6DZ</wicri:noRegion></affiliation></author><author><name sortKey="Galperin, Michael Y" sort="Galperin, Michael Y" uniqKey="Galperin M" first="Michael Y." last="Galperin">Michael Y. Galperin</name><affiliation wicri:level="2"><nlm:aff id="gks1297-AFF1">National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health (NIH), Bethesda, MD 20894, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health (NIH), Bethesda, MD 20894</wicri:regionArea><placeName><region type="state">Maryland</region></placeName></affiliation></author></analytic><series><title level="j">Nucleic Acids Research</title><idno type="ISSN">0305-1048</idno><idno type="eISSN">1362-4962</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The 20th annual Database Issue of <italic>Nucleic Acids Research</italic> includes 176 articles, half of which describe new online molecular biology databases and the other half provide updates on the databases previously featured in <italic>NAR</italic> and other journals. This year’s highlights include two databases of DNA repeat elements; several databases of transcriptional factors and transcriptional factor-binding sites; databases on various aspects of protein structure and protein–protein interactions; databases for metagenomic and rRNA sequence analysis; and four databases specifically dedicated to <italic>Escherichia coli</italic>. The increased emphasis on using the genome data to improve human health is reflected in the development of the databases of genomic structural variation (NCBI’s dbVar and EBI’s DGVa), the NIH Genetic Testing Registry and several other databases centered on the genetic basis of human disease, potential drugs, their targets and the mechanisms of protein–ligand binding. Two new databases present genomic and RNAseq data for monkeys, providing wealth of data on our closest relatives for comparative genomics purposes. The <italic>NAR</italic> online Molecular Biology Database Collection, available at <ext-link ext-link-type="uri" xlink:href="http://www.oxfordjournals.org/nar/database/a/">http://www.oxfordjournals.org/nar/database/a/</ext-link>, has been updated and currently lists 1512 online databases. The full content of the Database Issue is freely available online on the <italic>Nucleic Acids Research</italic> website (<ext-link ext-link-type="uri" xlink:href="http://nar.oxfordjournals.org/">http://nar.oxfordjournals.org/</ext-link>).</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Benson, D" uniqKey="Benson D">D Benson</name></author><author><name sortKey="Clark, K" uniqKey="Clark K">K Clark</name></author><author><name sortKey="Karsch Mizrachi, I" uniqKey="Karsch Mizrachi I">I Karsch-Mizrachi</name></author><author><name sortKey="Lipman, Dj" uniqKey="Lipman D">DJ Lipman</name></author><author><name sortKey="Ostell, J" uniqKey="Ostell J">J Ostell</name></author><author><name sortKey="Sayers, Ew" uniqKey="Sayers E">EW Sayers</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cochrane, G" uniqKey="Cochrane G">G Cochrane</name></author><author><name sortKey="Alako, B" uniqKey="Alako B">B 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Baker</name></author></analytic></biblStruct></listBibl></div1></back></TEI><pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Nucleic Acids Res</journal-id><journal-id journal-id-type="iso-abbrev">Nucleic Acids Res</journal-id><journal-id journal-id-type="publisher-id">nar</journal-id><journal-id journal-id-type="hwp">nar</journal-id><journal-title-group><journal-title>Nucleic Acids Research</journal-title></journal-title-group><issn pub-type="ppub">0305-1048</issn><issn pub-type="epub">1362-4962</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">23203983</article-id><article-id pub-id-type="pmc">3531151</article-id><article-id pub-id-type="doi">10.1093/nar/gks1297</article-id><article-id pub-id-type="publisher-id">gks1297</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group></article-categories><title-group><article-title>The 2013 <italic>Nucleic Acids Research</italic> Database Issue and the online Molecular Biology Database Collection</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Fernández-Suárez</surname><given-names>Xosé M.</given-names></name><xref ref-type="aff" rid="gks1297-AFF1"><sup>1</sup></xref><xref ref-type="corresp" rid="gks1297-COR1">*</xref></contrib><contrib contrib-type="author"><name><surname>Galperin</surname><given-names>Michael Y.</given-names></name><xref ref-type="aff" rid="gks1297-AFF1"><sup>2</sup></xref><xref ref-type="corresp" rid="gks1297-COR2">*</xref></contrib></contrib-group><aff id="gks1297-AFF1"><sup>1</sup>Cambridge, CB24 6DZ, UK and<sup>2</sup>National Center for Biotechnology Information (NCBI), National Library of Medicine, National Institutes of Health (NIH), Bethesda, MD 20894, USA</aff><author-notes><corresp id="gks1297-COR1">*To whom correspondence should be addressed. Tel: <phone>+1 301 435 5910</phone>; Fax: <fax>+1 301 435 7793</fax>; Email: <email>nardatabase@gmail.com</email> or <email>galperin@ncbi.nlm.nih.gov</email></corresp><corresp id="gks1297-COR2">Correspondence may also be addressed to Xosé M. Fernández-Suárez. Email: <email>xose.m.fernandez@gmail.com</email></corresp></author-notes><pub-date pub-type="ppub"><month>1</month><year>2013</year></pub-date><pub-date pub-type="epub"><day>30</day><month>11</month><year>2012</year></pub-date><pub-date pub-type="pmc-release"><day>30</day><month>11</month><year>2012</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
<volume>41</volume><issue>Database issue</issue><issue-title>Database issue</issue-title><fpage>D1</fpage><lpage>D7</lpage><history><date date-type="received"><day>14</day><month>11</month><year>2012</year></date><date date-type="accepted"><day>15</day><month>11</month><year>2012</year></date></history><permissions><copyright-statement>Published by Oxford University Press 2012.</copyright-statement><copyright-year>2012</copyright-year><license license-type="creative-commons" xlink:href="http://creativecommons.org/licenses/by-nc/3.0"><license-p><pmc-comment>CREATIVE COMMONS</pmc-comment>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">http://creativecommons.org/licenses/by-nc/3.0/</ext-link>), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.</license-p></license></permissions><abstract><p>The 20th annual Database Issue of <italic>Nucleic Acids Research</italic> includes 176 articles, half of which describe new online molecular biology databases and the other half provide updates on the databases previously featured in <italic>NAR</italic> and other journals. This year’s highlights include two databases of DNA repeat elements; several databases of transcriptional factors and transcriptional factor-binding sites; databases on various aspects of protein structure and protein–protein interactions; databases for metagenomic and rRNA sequence analysis; and four databases specifically dedicated to <italic>Escherichia coli</italic>. The increased emphasis on using the genome data to improve human health is reflected in the development of the databases of genomic structural variation (NCBI’s dbVar and EBI’s DGVa), the NIH Genetic Testing Registry and several other databases centered on the genetic basis of human disease, potential drugs, their targets and the mechanisms of protein–ligand binding. Two new databases present genomic and RNAseq data for monkeys, providing wealth of data on our closest relatives for comparative genomics purposes. The <italic>NAR</italic> online Molecular Biology Database Collection, available at <ext-link ext-link-type="uri" xlink:href="http://www.oxfordjournals.org/nar/database/a/">http://www.oxfordjournals.org/nar/database/a/</ext-link>, has been updated and currently lists 1512 online databases. The full content of the Database Issue is freely available online on the <italic>Nucleic Acids Research</italic> website (<ext-link ext-link-type="uri" xlink:href="http://nar.oxfordjournals.org/">http://nar.oxfordjournals.org/</ext-link>).</p></abstract><counts><page-count count="7"></page-count></counts></article-meta></front></pmc><affiliations><list><country><li>Royaume-Uni</li><li>États-Unis</li></country><region><li>Maryland</li></region></list><tree><country name="Royaume-Uni"><noRegion><name sortKey="Fernandez Suarez, Xose M" sort="Fernandez Suarez, Xose M" uniqKey="Fernandez Suarez X" first="Xosé M." last="Fernández-Suárez">Xosé M. Fernández-Suárez</name></noRegion></country><country name="États-Unis"><region name="Maryland"><name sortKey="Galperin, Michael Y" sort="Galperin, Michael Y" uniqKey="Galperin M" first="Michael Y." last="Galperin">Michael Y. Galperin</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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