Standardization initiatives in the (eco)toxicogenomics domain: a review
Identifieur interne : 000599 ( Istex/Curation ); précédent : 000598; suivant : 000600Standardization initiatives in the (eco)toxicogenomics domain: a review
Auteurs : Susanna Assunta Sansone [Royaume-Uni] ; Norman Morrison [Royaume-Uni] ; Philippe Rocca-Serra [Royaume-Uni] ; Jennifer Fostel [États-Unis]Source :
- Comparative and Functional Genomics [ 1531-6912 ] ; 2004-12.
English descriptors
- KwdEn :
Abstract
The purpose of this document is to provide readers with a resource of different ongoing standardization efforts within the ‘omics’ (genomic, proteomics, metabolomics) and related communities, with particular focus on toxicological and environmental applications. The review includes initiatives within the research community as well as in the regulatory arena. It addresses data management issues (format and reporting structures for the exchange of information) and database interoperability, highlighting key objectives, target audience and participants. A considerable amount of work still needs to be done and, ideally, collaboration should be optimized and duplication and incompatibility should be avoided where possible. The consequence of failing to deliver data standards is an escalation in the burden and cost of data management tasks. Copyright © 2005 John Wiley & Sons, Ltd.
Url:
DOI: 10.1002/cfg.447
Links toward previous steps (curation, corpus...)
- to stream Istex, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000599
Links to Exploration step
ISTEX:54E450C55FF52014EE9B506FAF9A81A7AA7B79DDLe document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title xml:lang="en">Standardization initiatives in the (eco)toxicogenomics domain: a review</title>
<author><name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna Assunta" last="Sansone">Susanna Assunta Sansone</name>
<affiliation wicri:level="1"><mods:affiliation>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Morrison, Norman" sort="Morrison, Norman" uniqKey="Morrison N" first="Norman" last="Morrison">Norman Morrison</name>
<affiliation wicri:level="1"><mods:affiliation>The University of Manchester, Kilburn Building, School of Computer Science, Oxford Road, Manchester M13 9PL, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>The University of Manchester, Kilburn Building, School of Computer Science, Oxford Road, Manchester M13 9PL</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Rocca Erra, Philippe" sort="Rocca Erra, Philippe" uniqKey="Rocca Erra P" first="Philippe" last="Rocca-Serra">Philippe Rocca-Serra</name>
<affiliation wicri:level="1"><mods:affiliation>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Fostel, Jennifer" sort="Fostel, Jennifer" uniqKey="Fostel J" first="Jennifer" last="Fostel">Jennifer Fostel</name>
<affiliation wicri:level="1"><mods:affiliation>National Institute of Environmental Health Sciences, National Center for Toxicogenomics. Research Triangle Park, NC 27709, USA</mods:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>National Institute of Environmental Health Sciences, National Center for Toxicogenomics. Research Triangle Park, NC 27709</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:54E450C55FF52014EE9B506FAF9A81A7AA7B79DD</idno>
<date when="2004" year="2004">2004</date>
<idno type="doi">10.1002/cfg.447</idno>
<idno type="url">https://api.istex.fr/document/54E450C55FF52014EE9B506FAF9A81A7AA7B79DD/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">000599</idno>
<idno type="wicri:Area/Istex/Curation">000599</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title level="a" type="main" xml:lang="en">Standardization initiatives in the (eco)toxicogenomics domain: a review</title>
<author><name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna Assunta" last="Sansone">Susanna Assunta Sansone</name>
<affiliation wicri:level="1"><mods:affiliation>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Morrison, Norman" sort="Morrison, Norman" uniqKey="Morrison N" first="Norman" last="Morrison">Norman Morrison</name>
<affiliation wicri:level="1"><mods:affiliation>The University of Manchester, Kilburn Building, School of Computer Science, Oxford Road, Manchester M13 9PL, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>The University of Manchester, Kilburn Building, School of Computer Science, Oxford Road, Manchester M13 9PL</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Rocca Erra, Philippe" sort="Rocca Erra, Philippe" uniqKey="Rocca Erra P" first="Philippe" last="Rocca-Serra">Philippe Rocca-Serra</name>
<affiliation wicri:level="1"><mods:affiliation>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD, UK</mods:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>EMBL‐EBI, The European Bioinformatics Institute, Cambridge CB10 1SD</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Fostel, Jennifer" sort="Fostel, Jennifer" uniqKey="Fostel J" first="Jennifer" last="Fostel">Jennifer Fostel</name>
<affiliation wicri:level="1"><mods:affiliation>National Institute of Environmental Health Sciences, National Center for Toxicogenomics. Research Triangle Park, NC 27709, USA</mods:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>National Institute of Environmental Health Sciences, National Center for Toxicogenomics. Research Triangle Park, NC 27709</wicri:regionArea>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series><title level="j">Comparative and Functional Genomics</title>
<title level="j" type="abbrev">Comp Funct Genom</title>
<idno type="ISSN">1531-6912</idno>
<idno type="eISSN">1532-6268</idno>
<imprint><publisher>John Wiley & Sons, Ltd.</publisher>
<pubPlace>Chichester, UK</pubPlace>
<date type="published" when="2004-12">2004-12</date>
<biblScope unit="volume">5</biblScope>
<biblScope unit="issue">8</biblScope>
<biblScope unit="page" from="633">633</biblScope>
<biblScope unit="page" to="641">641</biblScope>
</imprint>
<idno type="ISSN">1531-6912</idno>
</series>
<idno type="istex">54E450C55FF52014EE9B506FAF9A81A7AA7B79DD</idno>
<idno type="DOI">10.1002/cfg.447</idno>
<idno type="ArticleID">CFG447</idno>
</biblStruct>
</sourceDesc>
<seriesStmt><idno type="ISSN">1531-6912</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>database</term>
<term>ecotoxicogenomics</term>
<term>environment</term>
<term>functional genomics</term>
<term>standards</term>
<term>toxicogenomics</term>
<term>toxicology</term>
</keywords>
</textClass>
<langUsage><language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The purpose of this document is to provide readers with a resource of different ongoing standardization efforts within the ‘omics’ (genomic, proteomics, metabolomics) and related communities, with particular focus on toxicological and environmental applications. The review includes initiatives within the research community as well as in the regulatory arena. It addresses data management issues (format and reporting structures for the exchange of information) and database interoperability, highlighting key objectives, target audience and participants. A considerable amount of work still needs to be done and, ideally, collaboration should be optimized and duplication and incompatibility should be avoided where possible. The consequence of failing to deliver data standards is an escalation in the burden and cost of data management tasks. Copyright © 2005 John Wiley & Sons, Ltd.</div>
</front>
</TEI>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Istex/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000599 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Istex/Curation/biblio.hfd -nk 000599 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Ticri/CIDE |area= CyberinfraV1 |flux= Istex |étape= Curation |type= RBID |clé= ISTEX:54E450C55FF52014EE9B506FAF9A81A7AA7B79DD |texte= Standardization initiatives in the (eco)toxicogenomics domain: a review }}
![]() | This area was generated with Dilib version V0.6.25. | ![]() |