A phylogenetic analysis of Sciomyzidae (Diptera) and some related genera
Identifieur interne : 000699 ( Istex/Corpus ); précédent : 000698; suivant : 000700A phylogenetic analysis of Sciomyzidae (Diptera) and some related genera
Auteurs : Andrea T Thová ; Rudolf Rozkošn ; Lloyd Knutson ; Sujatha Narayanan Kutty ; Brian M. Wiegmann ; Rudolf MeierSource :
- Cladistics [ 0748-3007 ] ; 2013-08.
Abstract
Sciomyzidae is a family of acalyptrate flies with 546 species in 61 genera that is among the most extensively studied groups of higher Diptera. Most of the known larvae are obligate enemies of Gastropoda. Hundreds of studies published over the past 50 years have resulted in detailed information concerning morphology of adults and immature stages, biology, development, behaviour, phenology and distribution. However, studies of phylogenetic relationships are based almost exclusively on morphological characters of adults, and no comprehensive molecular analysis across the family has been published. Here we fill this void by generating and analysing molecular data for 54 species of Sciomyzidae (22 genera), including Phaeomyiidae (one genus), and seven representative species of five other families of Sciomyzoidea (Coelopidae, Dryomyzidae, Helcomyzidae, Heteromyzidae and Huttoninidae) as outgroups. The reconstruction is based on morphological characters as well as nucleotide sequences for genes from the mitochondrial (12S, 16S, COI, COII, Cytb) and nuclear genome (28S, EF1α). The results are compared with recent morphological analyses. Our analyses support the monophyly of Sciomyzidae + Phaeomyiidae, and place Phaeomyiinae as a unique lineage within Sciomyzidae. A modified classification comprising three subfamilies is proposed. The major subfamily, Sciomyzinae, consists of two monophyletic and well separated groups, the tribes Sciomyzini and Tetanocerini.
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DOI: 10.1111/cla.12002
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<front><div type="abstract" xml:lang="en">Sciomyzidae is a family of acalyptrate flies with 546 species in 61 genera that is among the most extensively studied groups of higher Diptera. Most of the known larvae are obligate enemies of Gastropoda. Hundreds of studies published over the past 50 years have resulted in detailed information concerning morphology of adults and immature stages, biology, development, behaviour, phenology and distribution. However, studies of phylogenetic relationships are based almost exclusively on morphological characters of adults, and no comprehensive molecular analysis across the family has been published. Here we fill this void by generating and analysing molecular data for 54 species of Sciomyzidae (22 genera), including Phaeomyiidae (one genus), and seven representative species of five other families of Sciomyzoidea (Coelopidae, Dryomyzidae, Helcomyzidae, Heteromyzidae and Huttoninidae) as outgroups. The reconstruction is based on morphological characters as well as nucleotide sequences for genes from the mitochondrial (12S, 16S, COI, COII, Cytb) and nuclear genome (28S, EF1α). The results are compared with recent morphological analyses. Our analyses support the monophyly of Sciomyzidae + Phaeomyiidae, and place Phaeomyiinae as a unique lineage within Sciomyzidae. A modified classification comprising three subfamilies is proposed. The major subfamily, Sciomyzinae, consists of two monophyletic and well separated groups, the tribes Sciomyzini and Tetanocerini.</div>
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<abstract xml:lang="en"><p>Sciomyzidae is a family of acalyptrate flies with 546 species in 61 genera that is among the most extensively studied groups of higher Diptera. Most of the known larvae are obligate enemies of Gastropoda. Hundreds of studies published over the past 50 years have resulted in detailed information concerning morphology of adults and immature stages, biology, development, behaviour, phenology and distribution. However, studies of phylogenetic relationships are based almost exclusively on morphological characters of adults, and no comprehensive molecular analysis across the family has been published. Here we fill this void by generating and analysing molecular data for 54 species of Sciomyzidae (22 genera), including Phaeomyiidae (one genus), and seven representative species of five other families of Sciomyzoidea (Coelopidae, Dryomyzidae, Helcomyzidae, Heteromyzidae and Huttoninidae) as outgroups. The reconstruction is based on morphological characters as well as nucleotide sequences for genes from the mitochondrial (12S, 16S, COI, COII, Cytb) and nuclear genome (28S, EF1α). The results are compared with recent morphological analyses. Our analyses support the monophyly of Sciomyzidae + Phaeomyiidae, and place Phaeomyiinae as a unique lineage within Sciomyzidae. A modified classification comprising three subfamilies is proposed. The major subfamily, Sciomyzinae, consists of two monophyletic and well separated groups, the tribes Sciomyzini and Tetanocerini.</p>
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<supportingInformation><p><b>Appendix S1.</b>
Strict consensus of four MP trees of the combined total evidence dataset (8277 characters), jackknife support over 50 is shown above (indel = missing) and below (indel = fifth character) nodes.</p>
<p><b>Appendix S2.</b>
The single most parsimonious tree of the molecular dataset (8234 characters), jackknife support over 50 is shown above (indel = fifth character) and below (indel = missing) nodes.</p>
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<abstractGroup><abstract type="main" xml:lang="en"><title type="main">Abstract</title>
<p>Sciomyzidae is a family of acalyptrate flies with 546 species in 61 genera that is among the most extensively studied groups of higher Diptera. Most of the known larvae are obligate enemies of Gastropoda. Hundreds of studies published over the past 50 years have resulted in detailed information concerning morphology of adults and immature stages, biology, development, behaviour, phenology and distribution. However, studies of phylogenetic relationships are based almost exclusively on morphological characters of adults, and no comprehensive molecular analysis across the family has been published. Here we fill this void by generating and analysing molecular data for 54 species of Sciomyzidae (22 genera), including Phaeomyiidae (one genus), and seven representative species of five other families of Sciomyzoidea (Coelopidae, Dryomyzidae, Helcomyzidae, Heteromyzidae and Huttoninidae) as outgroups. The reconstruction is based on morphological characters as well as nucleotide sequences for genes from the mitochondrial (12S, 16S, COI, COII, Cytb) and nuclear genome (28S, EF1α). The results are compared with recent morphological analyses. Our analyses support the monophyly of Sciomyzidae + Phaeomyiidae, and place Phaeomyiinae as a unique lineage within Sciomyzidae. A modified classification comprising three subfamilies is proposed. The major subfamily, Sciomyzinae, consists of two monophyletic and well separated groups, the tribes Sciomyzini and Tetanocerini.</p>
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<mods version="3.6"><titleInfo lang="en"><title>A phylogenetic analysis of Sciomyzidae (Diptera) and some related genera</title>
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<titleInfo type="alternative" contentType="CDATA" lang="en"><title>A phylogenetic analysis of Sciomyzidae (Diptera) and some related genera</title>
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<name type="personal"><namePart type="given">Andrea</namePart>
<namePart type="family">Tóthová</namePart>
<affiliation>Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlarska 2, 61137 Brno, Czech Republic</affiliation>
<description>Correspondence: Corresponding author: </description>
<role><roleTerm type="text">author</roleTerm>
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<name type="personal"><namePart type="given">Rudolf</namePart>
<namePart type="family">Rozkošný</namePart>
<affiliation>Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlarska 2, 61137 Brno, Czech Republic</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Lloyd</namePart>
<namePart type="family">Knutson</namePart>
<affiliation>Salita degli Albito 29, 04024 Gaeta, LT, Italy</affiliation>
<role><roleTerm type="text">author</roleTerm>
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<name type="personal"><namePart type="given">Sujatha Narayanan</namePart>
<namePart type="family">Kutty</namePart>
<affiliation>Department of Biological Sciences, National University of Singapore, 14 Science Dr. 4, Singapore 117543, Singapore</affiliation>
<role><roleTerm type="text">author</roleTerm>
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<name type="personal"><namePart type="given">Brian M.</namePart>
<namePart type="family">Wiegmann</namePart>
<affiliation>Department of Entomology, North Carolina State University, Raleigh, NC 27695, USA</affiliation>
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<name type="personal"><namePart type="given">Rudolf</namePart>
<namePart type="family">Meier</namePart>
<affiliation>Department of Biological Sciences, National University of Singapore, 14 Science Dr. 4, Singapore 117543, Singapore</affiliation>
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<originInfo><publisher>Blackwell Publishing Ltd</publisher>
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<dateIssued encoding="w3cdtf">2013-08</dateIssued>
<edition>Accepted 28 August 2012</edition>
<copyrightDate encoding="w3cdtf">2013</copyrightDate>
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<abstract lang="en">Sciomyzidae is a family of acalyptrate flies with 546 species in 61 genera that is among the most extensively studied groups of higher Diptera. Most of the known larvae are obligate enemies of Gastropoda. Hundreds of studies published over the past 50 years have resulted in detailed information concerning morphology of adults and immature stages, biology, development, behaviour, phenology and distribution. However, studies of phylogenetic relationships are based almost exclusively on morphological characters of adults, and no comprehensive molecular analysis across the family has been published. Here we fill this void by generating and analysing molecular data for 54 species of Sciomyzidae (22 genera), including Phaeomyiidae (one genus), and seven representative species of five other families of Sciomyzoidea (Coelopidae, Dryomyzidae, Helcomyzidae, Heteromyzidae and Huttoninidae) as outgroups. The reconstruction is based on morphological characters as well as nucleotide sequences for genes from the mitochondrial (12S, 16S, COI, COII, Cytb) and nuclear genome (28S, EF1α). The results are compared with recent morphological analyses. Our analyses support the monophyly of Sciomyzidae + Phaeomyiidae, and place Phaeomyiinae as a unique lineage within Sciomyzidae. A modified classification comprising three subfamilies is proposed. The major subfamily, Sciomyzinae, consists of two monophyletic and well separated groups, the tribes Sciomyzini and Tetanocerini.</abstract>
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<note type="content"> Appendix S1. Strict consensus of four MP trees of the combined total evidence dataset (8277 characters), jackknife support over 50 is shown above (indel = missing) and below (indel = fifth character) nodes. Appendix S2. The single most parsimonious tree of the molecular dataset (8234 characters), jackknife support over 50 is shown above (indel = fifth character) and below (indel = missing) nodes. Appendix S1. Strict consensus of four MP trees of the combined total evidence dataset (8277 characters), jackknife support over 50 is shown above (indel = missing) and below (indel = fifth character) nodes. Appendix S2. The single most parsimonious tree of the molecular dataset (8234 characters), jackknife support over 50 is shown above (indel = fifth character) and below (indel = missing) nodes.Supporting Info Item: Supporting info item - Supporting info item - </note>
<identifier type="ISSN">0748-3007</identifier>
<identifier type="eISSN">1096-0031</identifier>
<identifier type="DOI">10.1111/(ISSN)1096-0031</identifier>
<identifier type="PublisherID">CLA</identifier>
<part><date>2013</date>
<detail type="volume"><caption>vol.</caption>
<number>29</number>
</detail>
<detail type="issue"><caption>no.</caption>
<number>4</number>
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<extent unit="pages"><start>404</start>
<end>415</end>
<total>12</total>
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<identifier type="DOI">10.1111/cla.12002</identifier>
<identifier type="ArticleID">CLA12002</identifier>
<accessCondition type="use and reproduction" contentType="copyright">© The Willi Hennig Society 2012</accessCondition>
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