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JENUFA GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING

Identifieur interne : 000698 ( Istex/Corpus ); précédent : 000697; suivant : 000699

JENUFA GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING

Auteurs : Yvonne N Mcová ; Marek Eliáš ; Pavel Škaloud ; Ladislav Hoda ; Ji Neustupa

Source :

RBID : ISTEX:C276B93CECE58993BFB28AE0DA160310FC66F08F

English descriptors

Abstract

The diversity of eukaryotic microorganisms is far from fully described, as indicated by the vast number of unassigned genotypes retrieved by environmental sequencing or metagenomics. We isolated several strains of unicellular green algae from algal biofilms growing on tree bark in a Southeast Asian tropical rainforest and determined them to be relatives of an unidentified lineage of environmental 18S rDNA sequences, thus uncovering its cellular identity. Light, confocal, and electron microscope observations and sequencing the 18S rRNA gene revealed that the strains represent two different species within an apparently new genus, described here as Jenufa gen. nov. Both species formed minute coccoid cells with an irregular globular outline, a smooth cell wall, and a single parietal chloroplast without a pyrenoid. The two species, described herein as J. perforata and J. minuta, differed in chloroplast morphology and cell wall structure. Phylogenetic analyses of 18S rRNA gene sequences showed a firm relationship between the two species and placed the Jenufa lineage in an unresolved position within the CS clade (Chlamydomonadales + Sphaeropleales) of the class Chlorophyceae, although possible affinities to the genus Golenkinia were suggested both by maximum‐likelihood (ML) and Bayesian methods. Furthermore, two almost identical environmental 18S rDNA sequences from an endolithic microbial community occurring in dolomite rock in the central Alps turned out to be specifically related to, yet apparently distinct from, the sequence of J. minuta, indicating the existence of an undescribed Jenufa species occurring in the temperate zone.

Url:
DOI: 10.1111/j.1529-8817.2011.01009.x

Links to Exploration step

ISTEX:C276B93CECE58993BFB28AE0DA160310FC66F08F

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<i>JENUFA</i>
GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING
<link href="#fn1">
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<i>JENUFA</i>
GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING</title>
<title type="shortAuthors">YVONNE NĚMcovÁ ET AL.</title>
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<i>JENUFA</i>
GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE</title>
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<b>Table S1.</b>
List of algal strains characterized in this study.</p>
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<p>The diversity of eukaryotic microorganisms is far from fully described, as indicated by the vast number of unassigned genotypes retrieved by environmental sequencing or metagenomics. We isolated several strains of unicellular green algae from algal biofilms growing on tree bark in a Southeast Asian tropical rainforest and determined them to be relatives of an unidentified lineage of environmental 18S rDNA sequences, thus uncovering its cellular identity. Light, confocal, and electron microscope observations and sequencing the 18S rRNA gene revealed that the strains represent two different species within an apparently new genus, described here as
<i>Jenufa</i>
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<i>J. perforata</i>
and
<i>J. minuta</i>
, differed in chloroplast morphology and cell wall structure. Phylogenetic analyses of 18S rRNA gene sequences showed a firm relationship between the two species and placed the
<i>Jenufa</i>
lineage in an unresolved position within the CS clade (Chlamydomonadales + Sphaeropleales) of the class Chlorophyceae, although possible affinities to the genus
<i>Golenkinia</i>
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<i>J. minuta</i>
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<i>Jenufa</i>
species occurring in the temperate zone.</p>
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<p> Received 18 October 2010. Accepted 16 February 2011.</p>
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<p> Author for correspondence: e‐mail
<email>ynemcova@natur.cuni.cz</email>
.</p>
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<p> Present address: Experimental Phycology and Culture Collection of Algae, Department of the Albrecht‐von‐Haller‐Institute for Plant Sciences at the University of, Göttingen, Untere Karspüle 2, D‐37073 Göttingen, Germany.</p>
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<affiliation>Department of Botany, Faculty of Science, Charles University in Prague, Benátská 2, 128 01 Prague 2, Czech Republic</affiliation>
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<abstract lang="en">The diversity of eukaryotic microorganisms is far from fully described, as indicated by the vast number of unassigned genotypes retrieved by environmental sequencing or metagenomics. We isolated several strains of unicellular green algae from algal biofilms growing on tree bark in a Southeast Asian tropical rainforest and determined them to be relatives of an unidentified lineage of environmental 18S rDNA sequences, thus uncovering its cellular identity. Light, confocal, and electron microscope observations and sequencing the 18S rRNA gene revealed that the strains represent two different species within an apparently new genus, described here as Jenufa gen. nov. Both species formed minute coccoid cells with an irregular globular outline, a smooth cell wall, and a single parietal chloroplast without a pyrenoid. The two species, described herein as J. perforata and J. minuta, differed in chloroplast morphology and cell wall structure. Phylogenetic analyses of 18S rRNA gene sequences showed a firm relationship between the two species and placed the Jenufa lineage in an unresolved position within the CS clade (Chlamydomonadales + Sphaeropleales) of the class Chlorophyceae, although possible affinities to the genus Golenkinia were suggested both by maximum‐likelihood (ML) and Bayesian methods. Furthermore, two almost identical environmental 18S rDNA sequences from an endolithic microbial community occurring in dolomite rock in the central Alps turned out to be specifically related to, yet apparently distinct from, the sequence of J. minuta, indicating the existence of an undescribed Jenufa species occurring in the temperate zone.</abstract>
<note type="content">*Received 18 October 2010. Accepted 16 February 2011.</note>
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<topic>18S rRNA</topic>
<topic>Chlorophyceae</topic>
<topic>Chlorophyta</topic>
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<topic>phylogeny</topic>
<topic>taxonomy</topic>
<topic>ultrastructure</topic>
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<note type="content"> Table S1. List of algal strains characterized in this study.Supporting Info Item: Supporting info item - </note>
<identifier type="ISSN">0022-3646</identifier>
<identifier type="eISSN">1529-8817</identifier>
<identifier type="DOI">10.1111/(ISSN)1529-8817</identifier>
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<date>2011</date>
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<number>47</number>
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