SrasV1, PubMed, Corpus, bibRecord, 000F07

Acquisition of new protein domains by coronaviruses: analysis of overlapping genes coding for proteins N and 9b in SARS coronavirus.

Identifieur interne : 000F07 ( PubMed/Corpus ); précédent : 000F06; suivant : 000F08

Acquisition of new protein domains by coronaviruses: analysis of overlapping genes coding for proteins N and 9b in SARS coronavirus.

Auteurs : Aditi Shukla ; Rolf Hilgenfeld

Source :

Virus genes [ 1572-994X ] ; 2015.

RBID : pubmed:25410051

English descriptors

KwdEn :
- Genes, Overlapping, Genes, Viral, Humans, Models, Molecular, Nucleocapsid Proteins (chemistry), Nucleocapsid Proteins (genetics), Protein Conformation, Protein Structure, Tertiary, SARS Virus (chemistry), SARS Virus (genetics), Viral Proteins (chemistry), Viral Proteins (genetics).
MESH :
- chemical , chemistry : Nucleocapsid Proteins, Viral Proteins.
- chemical , genetics : Nucleocapsid Proteins, Viral Proteins.
- chemistry : SARS Virus.
- genetics : SARS Virus.
- Genes, Overlapping, Genes, Viral, Humans, Models, Molecular, Protein Conformation, Protein Structure, Tertiary.

Abstract

Acquisition of new proteins by viruses usually occurs through horizontal gene transfer or through gene duplication, but another, less common mechanism is the usage of completely or partially overlapping reading frames. A case of acquisition of a completely new protein through introduction of a start codon in an alternative reading frame is the protein encoded by open reading frame (orf) 9b of SARS coronavirus. This gene completely overlaps with the nucleocapsid (N) gene (orf9a). Our findings indicate that the orf9b gene features a discordant codon-usage pattern. We analyzed the evolution of orf9b in concert with orf9a using sequence data of betacoronavirus-lineage b and found that orf9b, which encodes the overprinting protein, evolved largely independent of the overprinted orf9a. We also examined the protein products of these genomic sequences for their structural flexibility and found that it is not necessary for a newly acquired, overlapping protein product to be intrinsically disordered, in contrast to earlier suggestions. Our findings contribute to characterizing sequence properties of newly acquired genes making use of overlapping reading frames.

DOI: 10.1007/s11262-014-1139-8
PubMed: 25410051

Links to Exploration step

pubmed:25410051

Le document en format XML

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<front><div type="abstract" xml:lang="en">Acquisition of new proteins by viruses usually occurs through horizontal gene transfer or through gene duplication, but another, less common mechanism is the usage of completely or partially overlapping reading frames. A case of acquisition of a completely new protein through introduction of a start codon in an alternative reading frame is the protein encoded by open reading frame (orf) 9b of SARS coronavirus. This gene completely overlaps with the nucleocapsid (N) gene (orf9a). Our findings indicate that the orf9b gene features a discordant codon-usage pattern. We analyzed the evolution of orf9b in concert with orf9a using sequence data of betacoronavirus-lineage b and found that orf9b, which encodes the overprinting protein, evolved largely independent of the overprinted orf9a. We also examined the protein products of these genomic sequences for their structural flexibility and found that it is not necessary for a newly acquired, overlapping protein product to be intrinsically disordered, in contrast to earlier suggestions. Our findings contribute to characterizing sequence properties of newly acquired genes making use of overlapping reading frames.</div>
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<Abstract><AbstractText>Acquisition of new proteins by viruses usually occurs through horizontal gene transfer or through gene duplication, but another, less common mechanism is the usage of completely or partially overlapping reading frames. A case of acquisition of a completely new protein through introduction of a start codon in an alternative reading frame is the protein encoded by open reading frame (orf) 9b of SARS coronavirus. This gene completely overlaps with the nucleocapsid (N) gene (orf9a). Our findings indicate that the orf9b gene features a discordant codon-usage pattern. We analyzed the evolution of orf9b in concert with orf9a using sequence data of betacoronavirus-lineage b and found that orf9b, which encodes the overprinting protein, evolved largely independent of the overprinted orf9a. We also examined the protein products of these genomic sequences for their structural flexibility and found that it is not necessary for a newly acquired, overlapping protein product to be intrinsically disordered, in contrast to earlier suggestions. Our findings contribute to characterizing sequence properties of newly acquired genes making use of overlapping reading frames.</AbstractText>
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</ArticleIdList>
<ReferenceList><Reference><Citation>Biotechniques. 2000 Jun;28(6):1102, 1104</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10868275</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 1987 Feb 11;15(3):1281-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3547335</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>EMBO J. 1984 Feb;3(2):351-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16453503</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1988 Nov 4;55(3):447-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2846182</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>N Engl J Med. 2012 Nov 8;367 (19):1814-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23075143</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1999 Jul 8;234(2):187-208</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10395892</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2007 Apr;81(8):3913-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17229691</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2004 Mar 12;303(5664):1666-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14752165</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Comput Biol. 2013;9(8):e1003162</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23966842</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 2002 Oct 16;299(1-2):1-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12459250</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1997 Feb;71(2):996-1003</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8995618</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2013 Oct;19(10):1697-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24050621</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2009 Jun 5;388(2):279-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19394665</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2005 Oct 28;310(5748):676-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16195424</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2003 May 30;300(5624):1399-404</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12730501</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Mol Evol. 2000 Mar;50(3):284-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10754072</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Mol Evol. 1997 Jun;44(6):625-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9169554</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1989 May 19;57(4):537-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2720781</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mod Pathol. 2005 Nov;18(11):1432-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15920543</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2013 Oct;100(1):286-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24012996</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Viruses. 2012 Nov 07;4(11):2902-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23202509</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Evolution. 2000 Jun;54(3):731-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10937248</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Genes. 2001 Jan;22(1):47-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11210938</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>RNA. 2006 Jul;12(7):1338-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16682564</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 2012 Oct;169(1):282-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22820404</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Genet. 2002 Sep;18(9):486</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12175810</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Lancet Infect Dis. 2013 Oct;13(10 ):859-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23933067</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Biol Sci. 2010 Dec 22;277(1701):3809-17</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20610432</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2014 Apr;20(4):552-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24655412</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2008 Jul 5;376(2):379-89</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18452964</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2006 Nov;72(2):78-88</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16820226</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 1987 Mar;157(1):47-57</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3029965</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2007 Oct;17(10):1496-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17785537</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Mol Evol. 1997;44 Suppl 1:S83-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9071016</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Wiley Interdiscip Rev RNA. 2012 Sep-Oct;3(5):661-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22715123</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2003 Oct 31;115(3):319-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14636559</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2013 Nov 28;503(7477):535-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24172901</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 1978 Apr 6;272(5653):532-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">692657</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2014 May 27;111(21):E2172-81</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24825891</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2005 Dec;79(23):14909-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16282490</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2009 Jun 1;25(11):1451-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19346325</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Cell Biol. 1989 Feb;108(2):229-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2645293</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2009 Oct;83(20):10719-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19640978</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2013 May;19(5):736-42B</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23693015</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2013 Jul;87(14):7790-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23678167</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 1997 Apr;48(1):101-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9140198</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2013 Nov;100(2):407-19</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23994190</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Lancet Infect Dis. 2014 Feb;14 (2):140-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24355866</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2013 Mar;19(3):456-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23622767</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2007 Aug;88(Pt 8):2137-43</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17622615</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2012 Dec;29(12):3767-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22821011</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2014 Jan;101:45-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24184128</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2007 May 23;2(5):e459</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17520018</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proteins. 2003;53 Suppl 6:566-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14579347</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2003 May 30;300(5624):1394-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12730500</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2014 Sep;109:97-109</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24995382</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 1996 Jan;40(1):75-89</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8725123</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>MBio. 2012 Nov 20;3(6):null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23170002</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12516-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25114257</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2006 Apr;87(Pt 4):1013-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16528052</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):E2920-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23043113</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Structure. 2006 Jul;14(7):1157-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16843897</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 1991 Jul;183(1):313-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2053284</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2000 Jan;17(1):75-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10666708</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 2008 Apr;133(1):113-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18045721</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 2006 Jul;119(1):29-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16310880</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbes Infect. 2005 May;7(5-6):882-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15878679</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2007 Nov 1;23(21):2947-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17846036</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 2006 Jul;119(1):52-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16325949</ArticleId>
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<Reference><Citation>Antiviral Res. 2014 Mar;103:39-50</Citation>
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   |texte=   Acquisition of new protein domains by coronaviruses: analysis of overlapping genes coding for proteins N and 9b in SARS coronavirus.
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Acquisition of new protein domains by coronaviruses: analysis of overlapping genes coding for proteins N and 9b in SARS coronavirus.

Acquisition of new protein domains by coronaviruses: analysis of overlapping genes coding for proteins N and 9b in SARS coronavirus.

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