SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro
Identifieur interne : 001594 ( Pmc/Corpus ); précédent : 001593; suivant : 001595SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro
Auteurs : Susan F. Dosch ; Supriya D. Mahajan ; Arlene R. CollinsSource :
- Virus Research [ 0168-1702 ] ; 2009.
Abstract
A purified recombinant spike (S) protein was studied for its effect on stimulating human peripheral blood monocyte macrophages (PBMC). We examined inflammatory gene mRNA abundances found in S protein-treated PBMC using gene arrays. We identified differential mRNA abundances of genes with functional properties associated with antiviral (CXCL10) and inflammatory (IL-6 and IL-8) responses. We confirmed cytokine mRNA increases by real-time quantitative(q) RT-PCR or ELISA. We further analyzed the sensitivity and specificity of the prominent IL-8 response. By real-time qRT-PCR, S protein was shown to stimulate IL-8 mRNA accumulation in a dose dependent manner while treatment with E protein did not. Also, titration of S protein-specific production and secretion of IL-8 by ELISA showed that the dose of 5.6 nM of S produced a significant increase in IL-8 (
Url:
DOI: 10.1016/j.virusres.2009.01.005
PubMed: 19185596
PubMed Central: 2699111
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PMC:2699111Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro</title><author><name sortKey="Dosch, Susan F" sort="Dosch, Susan F" uniqKey="Dosch S" first="Susan F." last="Dosch">Susan F. Dosch</name><affiliation><nlm:aff id="aff1">Department of Microbiology and Immunology, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author><author><name sortKey="Mahajan, Supriya D" sort="Mahajan, Supriya D" uniqKey="Mahajan S" first="Supriya D." last="Mahajan">Supriya D. Mahajan</name><affiliation><nlm:aff id="aff2">Department of Medicine, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author><author><name sortKey="Collins, Arlene R" sort="Collins, Arlene R" uniqKey="Collins A" first="Arlene R." last="Collins">Arlene R. Collins</name><affiliation><nlm:aff id="aff1">Department of Microbiology and Immunology, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">19185596</idno><idno type="pmc">2699111</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2699111</idno><idno type="RBID">PMC:2699111</idno><idno type="doi">10.1016/j.virusres.2009.01.005</idno><date when="2009">2009</date><idno type="wicri:Area/Pmc/Corpus">001594</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001594</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro</title><author><name sortKey="Dosch, Susan F" sort="Dosch, Susan F" uniqKey="Dosch S" first="Susan F." last="Dosch">Susan F. Dosch</name><affiliation><nlm:aff id="aff1">Department of Microbiology and Immunology, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author><author><name sortKey="Mahajan, Supriya D" sort="Mahajan, Supriya D" uniqKey="Mahajan S" first="Supriya D." last="Mahajan">Supriya D. Mahajan</name><affiliation><nlm:aff id="aff2">Department of Medicine, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author><author><name sortKey="Collins, Arlene R" sort="Collins, Arlene R" uniqKey="Collins A" first="Arlene R." last="Collins">Arlene R. Collins</name><affiliation><nlm:aff id="aff1">Department of Microbiology and Immunology, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</nlm:aff></affiliation></author></analytic><series><title level="j">Virus Research</title><idno type="ISSN">0168-1702</idno><idno type="eISSN">1872-7492</idno><imprint><date when="2009">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>A purified recombinant spike (S) protein was studied for its effect on stimulating human peripheral blood monocyte macrophages (PBMC). We examined inflammatory gene mRNA abundances found in S protein-treated PBMC using gene arrays. We identified differential mRNA abundances of genes with functional properties associated with antiviral (CXCL10) and inflammatory (IL-6 and IL-8) responses. We confirmed cytokine mRNA increases by real-time quantitative(q) RT-PCR or ELISA. We further analyzed the sensitivity and specificity of the prominent IL-8 response. By real-time qRT-PCR, S protein was shown to stimulate IL-8 mRNA accumulation in a dose dependent manner while treatment with E protein did not. Also, titration of S protein-specific production and secretion of IL-8 by ELISA showed that the dose of 5.6 nM of S produced a significant increase in IL-8 (<italic>p</italic> = 0.003) compared to mock-treated controls. The increase in IL-8 stimulated by a concentration of 5.6 nM of S was comparable to concentrations seen for S protein binding to ACE2 or to neutralizing monoclonal antibody suggesting a physiological relevance. An NF-κB inhibitor, TPCK (N-Tosyl-L-Phenylalanine Chloromethyl Ketone) could suppress IL-8 production and secretion in response to S protein in PBMC and THP-1 cells and in HCoV-229E virus-infected PBMC. Activation and translocation of NF-κB was shown to occur rapidly following exposure of PBMC or THP-1 cells to S protein using a highly sensitive assay for active nuclear NF-κB p65 transcription factor. The results further suggested that released or secreted S protein could activate blood monocytes through recognition by toll-like receptor (TLR)2 ligand.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Barton, G M" uniqKey="Barton G">G.M. Barton</name></author><author><name sortKey="Medzhitov, R" uniqKey="Medzhitov R">R. Medzhitov</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Beniac, D R" uniqKey="Beniac D">D.R. Beniac</name></author><author><name sortKey="Andonov, A" uniqKey="Andonov A">A. Andonov</name></author><author><name sortKey="Grudeski, E" uniqKey="Grudeski E">E. Grudeski</name></author><author><name sortKey="Booth, T F" uniqKey="Booth T">T.F. 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Virus Res</journal-id><journal-id journal-id-type="iso-abbrev">Virus Res</journal-id><journal-title-group><journal-title>Virus Research</journal-title></journal-title-group><issn pub-type="ppub">0168-1702</issn><issn pub-type="epub">1872-7492</issn><publisher><publisher-name>Elsevier B.V.</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">19185596</article-id><article-id pub-id-type="pmc">2699111</article-id><article-id pub-id-type="publisher-id">S0168-1702(09)00012-4</article-id><article-id pub-id-type="doi">10.1016/j.virusres.2009.01.005</article-id><article-categories><subj-group subj-group-type="heading"><subject>Article</subject></subj-group></article-categories><title-group><article-title>SARS coronavirus spike protein-induced innate immune response occurs via activation of the NF-κB pathway in human monocyte macrophages in vitro</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Dosch</surname><given-names>Susan F.</given-names></name><xref rid="aff1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Mahajan</surname><given-names>Supriya D.</given-names></name><xref rid="aff2" ref-type="aff">b</xref></contrib><contrib contrib-type="author"><name><surname>Collins</surname><given-names>Arlene R.</given-names></name><email>acollins@buffalo.edu</email><xref rid="aff1" ref-type="aff">a</xref><xref rid="cor1" ref-type="corresp">⁎</xref></contrib></contrib-group><aff id="aff1"><label>a</label>Department of Microbiology and Immunology, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</aff><aff id="aff2"><label>b</label>Department of Medicine, Division of Allergy, Immunology and Rheumatology, State University of New York at Buffalo, Buffalo, NY, United States</aff><author-notes><corresp id="cor1"><label>⁎</label>Corresponding author at: Department of Microbiology and Immunology, 138 Farber Hall, State University of New York at Buffalo, Buffalo NY 14214-3000, United States. Tel.: +1 716 829 2161; fax: +1 716 829 2158. <email>acollins@buffalo.edu</email></corresp></author-notes><pub-date pub-type="pmc-release"><day>29</day><month>1</month><year>2009</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on .</pmc-comment>
<pub-date pub-type="ppub"><month>6</month><year>2009</year></pub-date><pub-date pub-type="epub"><day>29</day><month>1</month><year>2009</year></pub-date><volume>142</volume><issue>1</issue><fpage>19</fpage><lpage>27</lpage><history><date date-type="received"><day>28</day><month>11</month><year>2008</year></date><date date-type="accepted"><day>9</day><month>1</month><year>2009</year></date></history><permissions><copyright-statement>Copyright © 2009 Elsevier B.V. All rights reserved.</copyright-statement><copyright-year>2009</copyright-year><copyright-holder>Elsevier B.V.</copyright-holder><license><license-p>Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.</license-p></license></permissions><abstract><p>A purified recombinant spike (S) protein was studied for its effect on stimulating human peripheral blood monocyte macrophages (PBMC). We examined inflammatory gene mRNA abundances found in S protein-treated PBMC using gene arrays. We identified differential mRNA abundances of genes with functional properties associated with antiviral (CXCL10) and inflammatory (IL-6 and IL-8) responses. We confirmed cytokine mRNA increases by real-time quantitative(q) RT-PCR or ELISA. We further analyzed the sensitivity and specificity of the prominent IL-8 response. By real-time qRT-PCR, S protein was shown to stimulate IL-8 mRNA accumulation in a dose dependent manner while treatment with E protein did not. Also, titration of S protein-specific production and secretion of IL-8 by ELISA showed that the dose of 5.6 nM of S produced a significant increase in IL-8 (<italic>p</italic> = 0.003) compared to mock-treated controls. The increase in IL-8 stimulated by a concentration of 5.6 nM of S was comparable to concentrations seen for S protein binding to ACE2 or to neutralizing monoclonal antibody suggesting a physiological relevance. An NF-κB inhibitor, TPCK (N-Tosyl-L-Phenylalanine Chloromethyl Ketone) could suppress IL-8 production and secretion in response to S protein in PBMC and THP-1 cells and in HCoV-229E virus-infected PBMC. Activation and translocation of NF-κB was shown to occur rapidly following exposure of PBMC or THP-1 cells to S protein using a highly sensitive assay for active nuclear NF-κB p65 transcription factor. The results further suggested that released or secreted S protein could activate blood monocytes through recognition by toll-like receptor (TLR)2 ligand.</p></abstract><kwd-group><title>Keywords</title><kwd>SARS</kwd><kwd>Spike protein</kwd><kwd>Human monocyte macrophages</kwd><kwd>NF-κB activation</kwd><kwd>Innate immunity</kwd></kwd-group></article-meta></front><body><sec><label>1</label><title>Introduction</title><p>The SARS coronavirus (SARS-CoV) epidemic of 2003 has rekindled an interest in coronavirus interaction with the host innate immune system. The SARS-CoV-induced disease, severe acute respiratory distress syndrome (SARS) is associated with a major inflammatory component. Increased cytokine and chemokine production in response to virus infection has been the focus of several investigations (<xref rid="bib16" ref-type="bibr">Frieman et al., 2008</xref>).</p><p>Peripheral blood monocyte macrophages (PBMC) are a tool for investigation of host response and mechanism of pathogenesis. PBMC may become activated by encountering SARS-CoV and recruit neutrophils, monocytes and immune responders such as natural killer (NK), T, and B cells to the site to shape early adaptive immunity (<xref rid="bib19" ref-type="bibr">He et al., 2003</xref>, <xref rid="bib18" ref-type="bibr">He et al., 2006</xref>). PBMC may also carry the virus to other sites such as the liver and brain and cause disease or persist for some time (<xref rid="bib38" ref-type="bibr">Shao et al., 2006</xref>).</p><p>PBMC are nonproductively infected by SARS-CoV. Virion minus RNA is synthesized but little or no infectious virus is produced (<xref rid="bib28" ref-type="bibr">Li et al., 2003a</xref>). The major disease syndrome, SARS, is in part due to monocyte macrophage responses (<xref rid="bib22" ref-type="bibr">Hsueh et al., 2004</xref>; <xref rid="bib30" ref-type="bibr">Li and Verma, 2002</xref>). We hypothesized that the spike (S) protein could play a significant role in inducing monocyte activation and that the NF-κB pathway is the mediator of the response.</p><p>Previously, it was shown that truncated S protein (aa260–606) induces IL-6 and TNFα but not IL-8 in the murine macrophage cell line, RAW264.7 (<xref rid="bib46" ref-type="bibr">Wang et al., 2007</xref>). Baculovirus displaying SARS S protein (aa324–688) induces IL-8 in human lung cell lines (<xref rid="bib5" ref-type="bibr">Chang et al., 2004</xref>). Coronavirus S protein expressed during mouse hepatitis virus (MHV) or SARS-CoV infection causes ER stress and upregulates CXCL2, the mouse counterpart of IL-8 (<xref rid="bib44" ref-type="bibr">Versteeg et al., 2007</xref>).</p><p>SARS-CoV is an enveloped positive-strand RNA virus in the family <italic>Coronaviridae</italic>, <italic>group 2b</italic>. The genome encodes a 5′non-structural gene ORF1ab, structural genes S, E, M, N and accessory genes in ORFs 3, 6, 7, 8, 9 (<xref rid="bib16" ref-type="bibr">Frieman et al., 2008</xref>). S, M and E are embedded in the envelope. Trimers of the spike (S) protein form large club-shaped protrusions that are responsible for virus adsorption to its receptor and cell fusion. Each 150–180 kDa spike monomer has receptor-binding activity in S1, the N-terminal half and fusion activity in S2, the C-terminal half (<xref rid="bib27" ref-type="bibr">Li et al., 2006</xref>). S1/S2 are not cleaved during maturation. The large external S1 domain binds to angiotensin-converting enzyme 2 (ACE2), the major cellular receptor found on ciliated nasotracheal epithelial cells, lung alveolar cells and intestinal enterocytes but not found on T cells, B cells or macrophages in the spleen and lymphoid organs (<xref rid="bib29" ref-type="bibr">Li et al., 2003b</xref>, <xref rid="bib6" ref-type="bibr">Chen and Subbarao, 2007</xref>). Virions have uncleaved viral spikes and during entry through endocytic vesicles or through fusion at the plasma membrane, viral spikes are cleaved by cathepsin L (<xref rid="bib27" ref-type="bibr">Li et al., 2006</xref>, <xref rid="bib3" ref-type="bibr">Bosch et al., 2008</xref>). Trypsin cleavage of the spike prior to infection also permits entry through the plasma membrane (<xref rid="bib3" ref-type="bibr">Bosch et al., 2008</xref>). Factor Xa, a membrane bound protease, cleaves SARS S protein into functional S1 and S2 subunits and allows viral entry (<xref rid="bib12" ref-type="bibr">Du et al., 2007</xref>).</p><p>The S2 trimers direct membrane fusion. S2 contains a hydrophobic fusion peptide close to the N-terminus, heptad repeat regions HR1 and HR2, and is followed by the transmembrane domain (TMD) with a (putative palmytoylated) cysteine rich region and by the carboxyterminal cytoplasmic domain (<xref rid="bib16" ref-type="bibr">Frieman et al., 2008</xref>, <xref rid="bib41" ref-type="bibr">Thorp et al., 2006</xref>). The HR2 region contains a leucine zipper domain important for oligomerization (<xref rid="bib10" ref-type="bibr">Corver et al., 2007</xref>, <xref rid="bib31" ref-type="bibr">Luo et al., 1999</xref>). There are 65 spike trimers per SARS-CoV virion (<xref rid="bib2" ref-type="bibr">Beniac et al., 2006</xref>).</p><p>We sought to determine the functions that affect inflammatory responses in monocyte macrophages exposed to SARS-CoV spike protein. We focused on interaction of cell membranes with the virion envelope protein responsible for the initiation of infection.</p></sec><sec><label>2</label><title>Materials and methods</title><sec><label>2.1</label><title>SARS-CoV envelope proteins</title><p>Purified recombinant truncated spike (S) protein, SARS-CoV Urbani strain, GenBank accession number <ext-link ext-link-type="gen" xlink:href="AY278741"><bold><underline>AY278741</underline></bold></ext-link>) was obtained from Protein Sciences Corporation, Meriden, CT and used as recommended. S protein was fully glycosylated, partially trimeric and active in binding to ACE2 in an ELISA assay (K. Rizzo, Protein Sciences Corp., personal communication). The purified product contained <0.15 endotoxin units (EU) per μg of S protein. The recombinant S protein consisted of the spike extracellular domain truncated at amino acid 1190 and was expressed in expressSF<sup>+</sup> insect cells from recombinant baculovirus D3252. The truncation removed the C-terminal TMD (Transmembrane domain) and cytoplasmic tail but retained the HR2 region that contains a leucine zipper domain important for oligomerization (<xref rid="bib31" ref-type="bibr">Luo et al., 1999</xref>). S protein was stored at −80 °C and was stable at 4 °C for one week (<xref rid="bib39" ref-type="bibr">Song et al., 2004</xref>).</p><p>Purified, recombinant SARS-CoV E protein (E protein) was obtained from Biodefense and Emerging Infections Research Resources Repository (<italic>bei</italic>resources), Manassas, VA. The purified E protein we obtained was a bacterially expressed E protein that had contained an N-terminal his tag which was removed by proteolysis and was further purified by nickel affinity chromatography. We found that the purified E protein had endotoxin activity. To remove the contaminating endotoxin we used DetoxiGel endotoxin removing columns. (Pierce Biotechnology) A 1 ml column of settled resin was loaded with 10 μg/ml E protein dissolved in 0.1 M PBS. The eluate fraction containing E protein was collected by gravity flow and stored at −80 °C.</p></sec><sec id="sec1"><label>2.2</label><title>Peripheral blood mononuclear cells (PBMC) isolation and culture</title><p>Peripheral blood was obtained from healthy volunteers. Leukocytes were separated by centrifugation through Ficoll-Paque Plus (Amersham Biosciences) (<xref rid="bib8" ref-type="bibr">Collins, 2002</xref>). The PBMC were washed twice and viable cells brought to a final concentration of 1.25 × 10<sup>6</sup> mL<sup>−1</sup>. Monocytes were enriched by adsorption onto 25 cm<sup>2</sup> culture flasks and incubated 3–4 days at 37 °C in RPMI 1640 Supplemented (containing 10 mM HEPES, 1 mM sodium pyruvate, non-essential amino acids) and 10% autologous serum (decomplemented, clarified).</p></sec><sec id="sec2"><label>2.3</label><title>Virus, pseudovirus and cell lines</title><p>HCoV-229E was obtained from the American Type Culture Collection (ATCC) and was propagated in MRC-5, human fetal lung cells obtained from ViroMed, Minnetonka, MN. MRC-5 cells were grown in minimum essential medium (MEM) supplemented with 10%, v/v FBS (Invitrogen). HCoV-229E infections were performed at a MOI of 1 and incubated at 37 °C. HCoV-229E infectious virus was quantitated by plaque assay in MRC-5 cells (<xref rid="bib9" ref-type="bibr">Collins and Grubb, 1998</xref>).</p><p>SARS pseudovirus bearing SARS-CoV S protein and a defective HIV-1 genome expressing luciferase as reporter was prepared as previously described (<xref rid="bib17" ref-type="bibr">He et al., 2004</xref>) In brief, 293 cells were cotransfected with pSARS encoding SARS-CoV S protein and pNL4-3.luc.RE encoding Env-defective, luciferase-expressing HIV-1 genome (plasmids obtained from Yuxian He, New York Blood Center, New York, NY) using Fugene 6 reagents (Boeringer-Mannheim). Supernatants containing SARS pseudovirus were harvested 48 h post-transfection and used for single cycle infection. To assay for SARS pseudovirus infectivity, hACE2-293 cells were incubated with dilutions of SARS pseudovirus for 48 h. The cells were then assayed for luciferase activity expressed as relative light units (RLU) using a luciferase kit (Promega, Madison WI).</p><p>HEK293T (293) cells were a gift from M. Garrick, SUNY at Buffalo, Buffalo, NY. hACE2-293 cells were a gift from Y. He, New York Blood Center, New York, NY. Both cell lines were propagated in DMEM supplemented with 10%, v/v FBS. hTLR2-293 cells were purchased from InvivoGen, Carlsbad, CA and propagated in DMEM supplemented with 10%, v/v FBS and 10 μg/ml blasticidin.</p><p>The human monocytic cell line THP-1 was obtained from ATCC and cultured in RPMI 1640 Supplemented (containing 10 mM HEPES, 1 mM sodium pyruvate, non-essential amino acids) plus 10%, v/v FBS and 0.05 mM 2-mercaptoethanol. Undifferentiated, non-adherent THP-1 cells (1 × 10<sup>6</sup> cells/25 cm<sup>2</sup>/flask) became differentiated and adherent after incubating the cultures for 24 h with phorbol myristate acetate (PMA) (Sigma<italic>)</italic> at a final concentration of 100 nM.</p></sec><sec><label>2.4</label><title>Stimulation of cells with SARS-CoV envelope proteins</title><p>SARS-CoV S and E envelope proteins were diluted in RPMI medium to treat in vitro PBMC cultures (2 × 10<sup>5</sup> cells/flask). To simulate a virus–cell interaction, cultures were washed twice in RPMI 1640, treated with various doses of S protein, (0.28–28 nM) or E protein, (0.5–25 nM) in 200 μl RPMI 1640 per 25 cm<sup>2</sup>/flask, or mock-treated, then incubated for 30 min on ice, then 30 min at 37 °C. 5 ml RPMI 1640 Supplemented was then added and cultures were returned to 37 °C. At 18–24 h, cytoplasmic RNA was extracted from the cells. In some experiments, aliquots of 0.5 ml supernatant medium were collected at 0, 3, 6, 9, 12 and 24 h of incubation for subsequent ELISA assay for secreted cytokines. Nuclear cell fractions were assayed for active NK-κB transcription factor (Section <xref rid="sec3" ref-type="sec">2.8</xref>).</p><p>Stimulation through toll-like receptor 2 (TLR2) in hTLR2-293 cells was performed using as a control, TLR2 agonist, mycobacterial lipomannan (LM-MS from <italic>M. smegmatis</italic>) (InvivoGen) at 10 ug/ml (<xref rid="bib13" ref-type="bibr">Elass et al., 2005</xref>).</p></sec><sec><label>2.5</label><title>Microarray gene expression arrays to profile the human inflammatory and the NF-κB pathway responses</title><p>mRNA abundance was studied comparing control and S protein-treated PBMC cultures with GEArray Q series Human Inflammatory Cytokines and Receptors Gene Array, (SuperArray Bioscience Corporation, Bethesda, MD). RNA was extracted using TriReagent following the method for cell lysates (Molecular Research Center, Inc. Cincinnati, OH) and stored in 90% ethanol at −80 °C. 1–5 μg of RNA was amplified and labeled with biotin-16-dUTP to create a cDNA probe using the Ampolabeling LPR Probe Synthesis Kit. (SuperArray Bioscience Corporation, Bethesda, MD). Bound probe was detected with Chemiluminescent Detection Kit (SuperArray Bioscience Corporation, Bethesda, MD). For the NF-κB Pathway responses (Oligo GEArray DNA Microarray, SuperArray Bioscience Corporation) which included IL-8, total RNA was further purified using RNeasy columns according to manufacturer's instructions (Qiagen, Valencia, CA) and a biotin-16-UTP cRNA probe was prepared using the RNA TrueLabeling-AMP 2.0 Kit (SuperArray Bioscience Corporation, Bethesda, MD).</p><p>Briefly, after 1–2 h of prehybridization at 60 °C the probe was hybridized overnight at 60 °C, washed with several low and high stringency washes and the bound probe was then reacted with alkaline phosphatase-conjugated streptavidin and detected on the array with CDP-star chemiluminescent substrate. The chemiluminescent array image was captured using a cooled Fuji Imager CCD camera. The parameters selected used a local background correction subtraction and were normalized to GAPDH as a control on each array. GAPDH was normalized to 1.0, which gave a value to which other induced expression could be compared. This allowed for the comparison of densities as relative amounts expressed.</p></sec><sec><label>2.6</label><title>Microarray data analysis</title><p>The relative intensity of the array spots was analyzed using GEArray Expression Analysis Suite 2.0 software (SuperArray Bioscience Corporation, Bethesda, MD).</p><p>The average intensity from multiple spots of individual genes on each array was compiled. Paired <italic>t</italic>-tests on normalized intensities with <italic>p</italic> values ≤0.05 from three or more independent experiments were used to generate a list of genes with significant changes in gene expression between control and S protein-treated samples. Only those that were reproducibly changed in independent experiments were analyzed further.</p><p>Quality control measures included subtracting baseline and setting housekeeping gene glyceraldehyde-3 phosphate dehydrogenase (GAPDH) to one for all arrays. A comparison analysis was performed for the S protein-treated sample against its corresponding mock-treated control as the baseline ‘signal’. Fold change was calculated from the signal ratio after normalizing the control signal values to 1. Activity analyses (ELISA) were performed on selected genes to confirm a biological function.</p></sec><sec><label>2.7</label><title>Statistical evaluations</title><p>Results were expressed as means ± SD or ±SE. Comparisons of values for test results from multiple individual donors of PBMC or from cultured cells were evaluated by Student's <italic>t</italic>-test for paired samples (<italic>p</italic> value) (<xref rid="bib47" ref-type="bibr">Wolk, 2008</xref>)</p></sec><sec id="sec3"><label>2.8</label><title>ELISA assays for secreted cytokines and chemokines</title><p>PBMC cultures were treated with S protein, E protein, or mock treated as described (Section <xref rid="sec2" ref-type="sec">2.3</xref>), and the culture medium was sampled at various times post-treatment to assay for secreted cytokines by ELISA. Media samples were stored at 4 °C. IL-8/CXCL8, MIP-1β, IL-1β, IL-6 and TNFα protein secretion into culture medium was quantitated using highly specific and sensitive ELISA kits. Quantikine ELISA kits were obtained from R&D Systems (Minneapolis, MN) and performed as described by the manufacturer. The sensitivities are: IL-8/CXCL8 assay is 1.5–7.5 pg/ml, MIP-1β assay is <4 pg/ml, IL-1β assay is <1 pg/ml, IL-6 assay is <0.70 pg/ml, TNFα assay is 0.5–5.5 pg/ml. Secreted cytokine and chemokine levels were compared based on picograms per ml of culture medium.</p></sec><sec><label>2.9</label><title>NF-κB transcription assay</title><p>For quantification of active NF-κB transcription factor, nuclear fractions of S treated and mock-treated PBMC were assayed with the EZ-Detect NF-κB p65 Transcription Factor Kit (Pierce Biotechnology, Rockford IL). This method has been published in detail (<xref rid="bib37" ref-type="bibr">Rosenau et al., 2004</xref>). 1 × 10<sup>4</sup> − 2 × 10<sup>5</sup> mock-treated PBMC (control), and PBMC treated with 11.2 nM S protein for 24 h were harvested by incubation with Versene (Invitrogen) at room temperature for 10 min and scraping into cold PBS. Adherent THP-1 cells (1 × 10<sup>6</sup> cells/flask) were similarly treated. Cytoplasmic and nuclear cell fractions were prepared using NE-PER Nuclear and Cytoplasmic Extraction Reagents (Pierce, Rockford IL). TNFα-activated PBMC nuclear extract was used as a positive control. PBMC were stimulated with 50 ng/ml recombinant human TNFα (R&D Systems, Minneapolis MN) for 15 min, and nuclear extracts were prepared as described above. (<xref rid="bib11" ref-type="bibr">Davis et al., 2001</xref>) All nuclear and cytoplasmic extracts were immediately placed at −70 °C.</p><p>Protein concentration was determined by MicroBCA Protein Assay (Pierce Protein Research Products, Rockford IL). 5–10 μl (1 μg) of nuclear extract was incubated in wells coated with NF-κB p65 consensus sequence for 1 h. Only the active form of NF-κB transcription factor binds to the consensus sequence in the wells. After the first incubation, the wells were washed and incubated with specific primary antibody to NF-κB p65 for 1 h. After incubation with the primary antibody, the wells were washed and incubated with a secondary HRP-conjugated antibody for 1 h, then washed. A chemiluminescent substrate was added to the wells and the resulting signal was detected using a luminometer (BioTek Multifunction Plate Reader Winooski, VT). Active NF-κB transcription factor was reported as luminescence per ug protein.</p></sec><sec><label>2.10</label><title>NF-κB inhibitor</title><p>TPCK, N-Tosyl-L-Phenylalanine Chloromethyl Ketone (Sigma Products, St. Louis, MO), an irreversible inhibitor of serine proteases with chymotrypsin-like specificity, was prepared as 10 mM stock in ethanol and stored at 4 °C. TPCK, 25 μM in RPMI 1640 medium, was used as an NF-κB inhibitor (<xref rid="bib20" ref-type="bibr">Henkel et al., 1993</xref>). TPCK acts by inhibiting IKBα protease so that IKBα is not proteolytically degraded and NF-κB is not released to undergo nuclear translocation (<xref rid="bib20" ref-type="bibr">Henkel et al., 1993</xref>). Briefly, for treatment with S protein or HCoV-229E virus, PBMC cultures were pretreated with 25 μM TPCK for 20 min on ice, then stimulated with S protein (Section <xref rid="sec2" ref-type="sec">2.3</xref>) or HCoV-229E virus (Section <xref rid="sec1" ref-type="sec">2.2</xref>) and incubated in medium with 25 μM TPCK for up to 24 h (<xref rid="bib25" ref-type="bibr">Jovasevic et al., 2008</xref>). TPCK effect on virus production in infected cells was measured by plaque assay of the culture supernatant.</p></sec><sec><label>2.11</label><title>Real-time, quantitative RT-PCR (qRT-PCR)</title><p>qRT-PCR was used to quantitate the effect of S and E proteins on IL-8 cytokine mRNA abundance. The RNA from in vitro PBMC cultures was reverse transcribed to cDNA using the reverse transcriptase kit from Promega (Promega Inc, Madison WI). Relative abundance of each mRNA species was quantitated using real-time quantitative PCR using specific primers: β-Actin, Forward 5′-TGA CGG GGT CAC CCA CAC TGT GCC CAT CTA, Reverse 3’-AGT CAT AGT CCG CCT AGA AGC ATT TGC GGT, IL-8, Forward 5’-TGC AGC TCT GTG TGA AGG TG, Reverse 3’-TCT GCA CCC AGT TTT CCT. TG. (<xref rid="bib33" ref-type="bibr">Mahajan et al., 2005</xref>) and CXCL10 Forward 5′-CTG ACT CTA AGT GGC ATT-3′, Reverse 5′-TGA TGG CCT TCG ATT CTG-3′ (<xref rid="bib7" ref-type="bibr">Cheung et al., 2005</xref>). (Primers were synthesized by Invitrogen or Integrated DNA Technologies, Skokie, IL.) Using Brilliant<sup>®</sup> SYBR<sup>®</sup> green Q-PCR master mix from Stratagene (Stratagene Inc, La Jolla CA.) to provide precise quantification of initial target in each PCR reaction, the amplification plot was examined at a point during the early log phase of product accumulation. This is accomplished by assigning a fluorescence threshold above background and determining the time point at which each sample's amplification plot reached the threshold (defined as the threshold cycle number or C<sub>T</sub>). The threshold is a numerical value assigned automatically by the software for each run above the calculated baseline. The C<sub>T</sub> value assigned to a particular sample thus reflects the point during the amplification reaction at which sufficient number of amplicons has accumulated above the baseline. After a suitable threshold is selected, the data are analyzed and C<sub>T</sub> values for each sample determined. Differences in threshold cycle number (C<sub>T</sub>) are used to quantify the relative amount of PCR target contained within each tube. Relative expression of mRNA species is calculated using the comparative C<sub>T</sub> method. Briefly, for each sample, the difference in C<sub>T</sub> values (ΔC<sub>T</sub>) was calculated for each mRNA by taking the mean C<sub>T</sub> of duplicate tubes and subtracting the mean C<sub>T</sub> of the duplicate tubes for the reference RNA (β-Actin) measured on an aliquot from the same RT-reaction.<disp-formula><mml:math id="M1" altimg="si1.gif" overflow="scroll"><mml:mrow><mml:mi>Δ</mml:mi><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo stretchy="false">(</mml:mo><mml:mtext>test gene</mml:mtext><mml:mo stretchy="false">)</mml:mo><mml:mo>−</mml:mo><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo stretchy="false">(</mml:mo><mml:mi>β</mml:mi><mml:mtext>-Actin</mml:mtext><mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:math></disp-formula>The ΔC<sub>T</sub> for the treated sample was then subtracted from the ΔC<sub>T</sub> for the untreated control sample to generate a ΔΔC<sub>T</sub>.<disp-formula><mml:math id="M2" altimg="si2.gif" overflow="scroll"><mml:mrow><mml:mi>Δ</mml:mi><mml:mi> </mml:mi><mml:mi>Δ</mml:mi><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>Δ</mml:mi><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo stretchy="false">(</mml:mo><mml:mtext>treated sample</mml:mtext><mml:mo stretchy="false">)</mml:mo><mml:mo>−</mml:mo><mml:mi>Δ</mml:mi><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub><mml:mo stretchy="false">(</mml:mo><mml:mtext>untreated control</mml:mtext><mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:math></disp-formula></p><p>The mean of these ΔΔC<sub>T</sub> measurements was then used to calculate the expression of the test gene relative to the reference gene and normalized to the untreated control as follows:<disp-formula><mml:math id="M3" altimg="si3.gif" overflow="scroll"><mml:mrow><mml:mtext>Transcript Accumulation Index</mml:mtext><mml:mo stretchy="false">(</mml:mo><mml:mtext>TAI</mml:mtext><mml:mo stretchy="false">)</mml:mo><mml:mtext>or Relative Expression</mml:mtext><mml:mo>=</mml:mo><mml:msup><mml:mn>2</mml:mn><mml:mrow><mml:mo>−</mml:mo><mml:mi>Δ</mml:mi><mml:mi>Δ</mml:mi><mml:msub><mml:mtext>C</mml:mtext><mml:mtext>T</mml:mtext></mml:msub></mml:mrow></mml:msup></mml:mrow></mml:math></disp-formula></p><p>This calculation assumes that all PCR reactions are working with 100% efficiency. All PCR efficiencies were found to be >95%; therefore this assumption introduces minimal error into the calculations.</p></sec></sec><sec><label>3</label><title>Results</title><sec><label>3.1</label><title>Inflammatory gene analysis</title><p>To investigate the effect of treatment with S protein on the inflammatory response, we compared relative abundance of mRNA species of treated and mock-treated PBMC using microarray analysis. The paired <italic>t</italic>-test was used to detect mRNA species with statistically significant differences in expression, <italic>p</italic> ≤ 0.05. <xref rid="fig1" ref-type="fig">Fig. 1</xref>is the summary of genes identified by the analysis. Treatment with S protein increased the abundance of CCL15 mRNA by 2.2-fold (<italic>p</italic> = 0.033), CCL16 mRNA by 1.6-fold (<italic>p</italic> = 0.033) and CCL19 mRNA by 1.7-fold (<italic>p</italic> = 0.011). These chemokines chemo attract and activate monocytes. Cytokine IL-12A mRNA, which activates natural killer (NK) cells increased 2.36-fold (<italic>p</italic> = 0.021). Interestingly, S protein treatment increased CXCL10 mRNA abundance by 5.5-fold (<italic>p</italic> = 0.029) and CXCL11 mRNA by 2.2-fold (<italic>p</italic> = 0.014). These genes are modulated by virus infection (<xref rid="bib7" ref-type="bibr">Cheung et al., 2005</xref>, <xref rid="bib42" ref-type="bibr">Tseng et al., 2005</xref>). Only CXCL10 mRNA abundance was verified by qRT-PCR, which showed transcript accumulation increasing 6.4–8.0-fold in response to S protein.<fig id="fig1"><label>Fig. 1</label><caption><p>Differential mRNA abundances determined by a microarray focused on immunologically relevant genes after treatment of PBMC (2 × 10<sup>5</sup> cells) with 11.2 nM S protein for 24 h. Statistically significant (<italic>p</italic> value <0.05) differences in mRNA abundance were identified using the student's <italic>t</italic>-test by comparing treated with mock-treated culture from three or more independent experiments. Sixteen differences in mRNA abundance were identified. <sup>1</sup>CXCL10 was further analyzed by qRT-PCR.</p></caption><graphic xlink:href="gr1"></graphic></fig></p><p>S protein treatment also increased leptin mRNA 2.2-fold (<italic>p</italic> = 0.031). Leptin has immunoregulatory activity. CCR5 (the receptor for CCL5, CCL4, CCL3) mRNA increased 1.3-fold (<italic>p</italic> = 0.022). Chemokine receptor XCR1 increased 1.9-fold (<italic>p</italic> = 0.004.) LTBR, a receptor for TNF, increased 3.5-fold (<italic>p</italic> = 0.048.) (by qRT-PCR, LTBR did not increase more than 2-fold). Cytokine receptors IL-10RA and IL17R increased 2.3-fold (<italic>p</italic> = 0.046) and 1.45-fold (<italic>p</italic> = 0.016) respectively. The fold increases were not further verified by qRT-PCR, however, they suggested that the viral S protein acts as an inflammatory stimulus in PBMC.</p><p>PBMC treated with S protein showed increased abundance of mRNAs for MIP-1β 1.3-fold (<italic>p</italic> = 0.12, ns), IL-1β 3-fold (<italic>p</italic> = 0.12, ns), IL-8 3.7-fold (<italic>p</italic> = 0.34, ns), IL-6 7-fold (<italic>p</italic> = 0.016) and TNFα 7.5-fold (<italic>p</italic> = 0.12, ns). Production and secretion of these protective cytokines and chemokines after treatment of PBMC with S protein was further analyzed.</p></sec><sec><label>3.2</label><title>Inflammatory cytokine activity</title><p>In addition to mRNA abundance studies we also quantitated inflammatory cytokine and chemokine activities by ELISA assay. In vitro PBMC (2 × 10<sup>5</sup>) were treated with 11.2 nM S protein for 24 h. Supernatant medium from the cultures was tested for cytokines by the Quantikine ELISA assay. The results were expressed as pg/ml and the percentage increase in the secreted cytokine in S protein-treated versus mock-treated was compared. We observed that the treatment with S protein increased the levels of secreted IL-8, MIP-1β, IL-6, IL-1β from in vitro PBMC, <xref rid="fig2" ref-type="fig">Fig. 2</xref>. S protein-treated cells produced significantly more IL-8 (453%, <italic>p</italic> = 0.008), MIP-1β (646%, <italic>p</italic> = 0.008), IL-6 (>297%, <italic>p</italic> = 0.027), IL-1β (285%, <italic>p</italic> = 0.03). The increase in TNFα mRNA abundance was not significant (364%, <italic>p</italic> = 0.064, ns). Our results showed increased production and secretion of protective cytokines and chemokines after treatment of PBMC with S protein.<fig id="fig2"><label>Fig. 2</label><caption><p>S protein-treated PBMC synthesized and secreted significantly (<italic>p</italic> < 0.05) more of IL-8, MIP-1β, IL-6, IL-1β inflammatory cytokines than the control. PBMC (2 × 10<sup>5</sup> cells) were cultured with and without 11.2 nM S protein for 24 h and supernatants were assayed for cytokines by ELISA. Mean ± SE of three or more independent experiments is shown. <italic>p</italic> values were determined by student's <italic>t</italic>-test comparing S protein-treated and mock-treated control culture. TNFα <italic>p</italic> = ns.</p></caption><graphic xlink:href="gr2"></graphic></fig></p></sec><sec><label>3.3</label><title>The effect of S protein on IL-8 synthesis and secretion by PBMC is dose dependent</title><p>Data presented in <xref rid="fig3" ref-type="fig">Fig. 3</xref>show the effect of concentration of S protein on synthesis and secretion of the chemokine IL-8 by PBMC into the culture supernatants as measured by ELISA. Kinetic studies performed at 3, 6 and 9 h of incubation after treatment with 0.28, 2.8 and 5.6 nM S protein showed a dose dependent increase in IL-8 production compared to control cultures at all time periods. PBMC treated with S protein at 5.6 nM produced significantly more IL-8 compared to controls. This corresponded to 132% (<italic>p</italic> = .0027) at 3 h, 107% (<italic>p</italic> = .037) at 6 h and 84% (<italic>p</italic> = .043) at 9 h. Lower concentrations of S did not significantly affect IL-8 production. At 2.8 nM S protein the increase was 77, 59 and 47% and at 0.28 nM S protein the increase was 19, 14 and 3% at 3, 6 and 9 h respectively. Our kinetic studies performed at 3, 6 and 9 h of incubation showed significant IL-8 production by PBMC in an S protein concentration dependent manner.<fig id="fig3"><label>Fig. 3</label><caption><p>Production and secretion of IL-8 was significantly increased in PBMC after treatment with S protein. The kinetics and dose response effect of S protein on in vitro PBMC 3, 6 and 9 h after treatment with S protein (0.28, 2.8 and 5.6 nM) were evaluated. Secreted IL-8 is expressed as pg/ml (mean ± SE of three separate experiments). Statistical significance was determined using the student's <italic>t</italic>-test based on comparison of S protein-treated with the mock-treated control for each time point. Our results indicated that S protein treatment increased IL-8 production in a dose dependent manner and that 5.6 nM gave a statistically significant response compared to control.</p></caption><graphic xlink:href="gr3"></graphic></fig></p></sec><sec id="sec4"><label>3.4</label><title>S protein but not E protein increased IL-8 mRNA abundance in a dose dependent manner</title><p>E protein is similar to S protein in that it is an envelope protein expressed on the surface of virions and infected cells. We compared the effects of S and E protein treatments on IL-8 mRNA abundance in PBMC. In vitro PBMC were treated with various concentrations of E and S proteins for 24 h and RNA was extracted, reverse transcribed and cDNA amplified by qPCR using primers specific for the housekeeping gene β-Actin and IL-8. Data presented in <xref rid="fig4" ref-type="fig">Fig. 4</xref>A show the relative expression (TAI values) of IL-8 in S versus E treated cultures. As expected, S protein increased IL-8 mRNA abundance in a dose dependent manner as follows: 1.9-fold at 0.28 nM S, 2.04-fold at 2.8 nM S, 7.89-fold at 5.6 nM S and 22.01-fold at 28 nM S. On the other hand, treatment with E protein did not increase IL-8 mRNA abundance as follows: 1.06-fold at 0.5 nM E, 0.08-fold at 2.5 nM E and 0.85-fold at 25 nM E as compared to control. Our results indicated that treatment with S protein increased IL-8 mRNA, while E protein did not increase IL-8 mRNA in PBMC.<fig id="fig4"><label>Fig. 4</label><caption><p>S protein but not E protein treatment increased IL-8 mRNA abundance and IL-8 production and secretion in PBMC. In vitro PBMC (2 × 10<sup>5</sup> cells) were treated with S protein (0.28, 2.8, 5.6 and 28 nM) or E protein (0.5, 2.5 and 25 nM) for 24 h. (A) RNA was extracted, reverse transcribed, cDNA amplified and IL-8 gene expression was determined by real-time quantitative PCR. Relative expression of mRNA species was calculated using the comparative C<sub>T</sub> method. Statistical significance was determined using the student's <italic>t</italic>-test based on comparison with the mock-treated control for each dose. Significant differences in IL-8 mRNA abundance were observed when the PBMC were treated with S protein ≥5.6 nM compared to control (<italic>p</italic> = 0.047, data of three separate experiments) while E protein did not increase IL-8 mRNA levels. (B) Secreted IL-8 concentrations at 24 h following S protein and E protein treatment of PBMC were determined by ELISA. IL-8 concentration increased in S protein-treated PBMC in proportion to mRNA abundance whereas secreted IL-8 did not increase in E protein-treated PBMC, compared to control.</p></caption><graphic xlink:href="gr4"></graphic></fig></p></sec><sec><label>3.5</label><title>S protein but not E protein increased IL-8 production in a dose dependent manner</title><p>The synthesis and secretion of IL-8 by S protein- and E protein-treated PBMC (from Section <xref rid="sec4" ref-type="sec">3.4</xref> above) was quantitated by ELISA assay of the supernatant medium after 24 h of incubation. PBMC treated with S protein produced more IL-8 in a dose dependent manner as follows 2049 pg/ml (12% increase) at 0.28 nM S, 2782 pg/ml (52% increase) at 2.8 nM S, 6340 pg/ml (246% increase) at 5.6 nM S, 12,774 pg/ml (598% increase) at 28 nM S as compared to the control, 1829 pg/ml, without S protein. PBMC treated with E protein produced less IL-8 as follows; 885 pg/ml (19% less) at 0.5 nM E, 823 pg/ml (21% less) at 2.5 nM E, 736 pg/ml (30% less) at 25 nM E as compared to the control, 1045 pg/ml, without E protein <xref rid="fig4" ref-type="fig">Fig. 4</xref>B. Our results indicated that S protein increased IL-8 secretion in proportion to increased mRNA abundance, while E protein did not increase IL-8 secretion in PBMC.</p></sec><sec><label>3.6</label><title>NF-κB inhibitor suppresses the synthesis and secretion of IL-8 in PBMC and THP-1 cells after treatment with S protein and in PBMC infected with HCoV-229E</title><p>We next determined whether IL-8 production was dependent on NF-κB, which is activated through IκBα proteolysis. In order to inhibit NF-κB activation, we examined the effect of pretreatment of cells with TPCK, an NF-κB inhibitor that inhibits IκBα protease (<xref rid="bib20" ref-type="bibr">Henkel et al., 1993</xref>). PBMC cultures (10<sup>4</sup>-10<sup>5</sup> cells) or THP-1 cultures (10<sup>6</sup> cells) were pretreated with 25 μM TPCK for 20 min, followed by S protein treatment and incubation in the presence of TPCK for 24 h. Treated with S protein alone, TPCK alone or mock-treated served as controls. Production and secretion of IL-8 into the supernatant medium was measured by ELISA. Our results showed that in PBMC, S protein alone increased IL-8 significantly (1714 ± 432 pg/ml versus control 275 ± 330 pg/ml, <italic>p</italic> = 0.0005) whereas pretreatment of PBMC with TPCK significantly reduced the amount of IL-8 produced in response to S protein (1714 ± 432 pg/ml versus S protein with inhibitor, 94 ± 157 pg/ml, <italic>p</italic> = 0.024, 95% inhibition). In mock-treated PBMC with inhibitor 66 ± 113 pg/ml of secreted IL-8 was produced <xref rid="fig5" ref-type="fig">Fig. 5</xref>A. Similarly, in THP-1 cells, S protein alone increased IL-8 significantly (1403 ± 79 pg/ml versus control 863 ± 48 pg/ml, <italic>p</italic> = 0.017) whereas pretreatment with TPCK significantly reduced the amount of IL-8 produced in response to S protein (1403 ± 79 pg/ml versus S protein with inhibitor, 3.4 ± 3.2 pg/ml). In mock-treated THP-1 cells with inhibitor <1.5 pg/ml of IL-8 was produced <xref rid="fig5" ref-type="fig">Fig. 5</xref>B. Next, the effect of TPCK inhibitor on IL-8 secretion in HCoV-229E-infected PBMC was measured during one cycle of virus replication (8 h post-infection). TPCK only partially inhibited the secretion of IL-8 and the effect was not seen until 6 h after infection suggesting that post-entry events were involved <xref rid="fig5" ref-type="fig">Fig. 5</xref>C. TPCK toxicity for virus-infected cells was measured by plaque assay. HCoV-229E yield was 38% lower in PBMC cultures in the presence of 25 μM TPCK. Virus titer with TPCK was 4.7 log10 versus 5.13 log10 pfu/ml without TPCK at 8 h post-infection. Our results indicated that NF-κB activation was required for production and secretion of IL-8 in response to treatment of PBMC or THP-1 cells with S protein. However, TPCK treatment was not sufficient to completely inhibit IL-8 production and secretion in PBMC infected with HCoV-229E at MOI of 1.<fig id="fig5"><label>Fig. 5</label><caption><p>Effect of treatment with TPCK on the IL-8 response to S protein in PBMC and THP-1 cells and in HCoV-229E-infected PBMC. PBMC or THP-1 cells were pretreated with 25 μM TPCK for 20 min prior to addition of 11.2 nM S protein. Secretion of IL-8 into culture supernatants after 24 h of incubation was measured using ELISA: (A) In PBMC, in the presence of TPCK the response to S protein was reduced by 95% (<italic>p</italic> = 0.024) (B) In THP-1 cells, in the presence of TPCK the response to S protein was reduced by 95% (<italic>p</italic> = 0.022). (C) In HCoV-229E-infected PBMC, in the presence of TPCK the secretion of IL-8 was reduced by 51% at 6 h post-infection and 34% at 8 h post-infection (<italic>p</italic> = 0.018). The data are from three independent experiments.</p></caption><graphic xlink:href="gr5"></graphic></fig></p></sec><sec><label>3.7</label><title>Active nuclear NF-κB is increased in PBMC and THP-1 cells treated with S protein</title><p>In order to determine the effect of S protein treatment on nuclear NF-κB activity, we measured the amount of active NF-κB p65 transcription factor in the nucleus using an assay that measures the amount of NF-κB p65 that binds to its consensus sequence immobilized on wells of a 96-well plate. Nuclear fractions of PBMC treated with S protein showed higher levels NF-κB p65 DNA binding activity than mock-treated controls. Activity levels in PBMC at 6 h post-treatment were: S protein 23,585 ± 13,414 (luminescence units per μg nuclear protein) versus control 6968 ± 3490 (238% increase, <italic>p</italic> = 0.018), at 9 h post-treatment S protein 19,880 ± 4694 (luminescence units per μg nuclear protein) versus control 6725 ± 2680 (151% increase, <italic>p</italic> = 0.0007), at 18 h post-treatment S protein 37,476 ± 10,416 (luminescence units per μg nuclear protein) versus controls 11,500 ± 6600 (226% increase, (<italic>p</italic> = 0.15, ns) <xref rid="fig6" ref-type="fig">Fig. 6</xref>A. When adherent THP-1 cells were analyzed, activity levels at 1 h post-treatment were: S protein 73,382 ± 2383 (luminescence units per μg nuclear protein) versus control 41,961 ± 7516 (75% increase, <italic>p</italic> = 0.0005), at 4 h post-treatment, S protein 55,339 ± 1666 (luminescence units per μg nuclear protein) versus control 33,487 ± 5535 (65% increase, <italic>p</italic> = 0.004) <xref rid="fig6" ref-type="fig">Fig. 6</xref>B. In THP-1 cells, TPCK pretreatment reduced the NF-κB promoter binding activity response to S protein. Our results showed that NF-κB promoter activity increased in PBMC and THP-1 cells treated with S protein and that TPCK pretreatment could reduce the response.<fig id="fig6"><label>Fig. 6</label><caption><p>Quantitation of the effect of S protein on the activation of NF-κB. Nuclear proteins were extracted from PBMC or THP-1 cells treated with S protein (11.2 nM) or mock-treated (control). To assay for activated NF-κB, 1 μg of the nuclear extract was added per well coated with NF-κB consensus DNA sequence and the amount of active NF-κB p65 bound after 1 h incubation was measured as luminescence units using EZ Detect NF-κB p65 Transcription Factor Assay. Each bar represents luminescence activity per μg nuclear extract (mean ± S.E from three independent experiments). The results show that in (A) PBMC and (B) THP-1 cells, treatment with S protein increased NF-κB activity compared to controls. In THP-1 cells, TPCK pretreatment reduced NF-κB binding activity in response to S protein by 62% (<italic>p</italic> = 0.04) at 1 h post-treatment and by 77% (<italic>p</italic> = 0.008) at 4 h post-treatment with S protein.</p></caption><graphic xlink:href="gr6"></graphic></fig></p></sec><sec><label>3.8</label><title>S protein utilizes toll-like receptor 2(TLR 2) to increase IL-8 production</title><p>We next examined whether toll-like receptors that are present on human macrophages could interact with S protein to induce IL-8 secretion. Using 293 cells stably expressing human TLR2, we found that hTLR2 expression was sufficient to allow for IL-8 production in response to S protein (573 ± 194 pg/ml versus control 218 ± 154 pg/ml, <italic>p</italic> = 0.03) <xref rid="fig7" ref-type="fig">Fig. 7</xref>A. 293 cells did not show an IL-8 response to S protein <xref rid="fig7" ref-type="fig">Fig. 7</xref>B. This was an important observation given that TLR2 can be activated by several viruses or viral components and is predominantly expressed on macrophages in humans (<xref rid="bib15" ref-type="bibr">Finberg et al., 2007</xref>). hACE2-293 cells did not show an IL-8 response to S protein whereas SARS pseudovirus stimulated low levels of IL-8 (42 ± 13 pg/ml) possibly through hACE2 signaling (<xref rid="bib5" ref-type="bibr">Chang et al., 2004</xref>) <xref rid="fig7" ref-type="fig">Fig. 7</xref>C. In 293 cells, pSARS pHIV cotransfection results in S protein synthesis and secretion of SARS pseudovirus. When supernantant medium from these cotransfected cells was examined, a low level of IL-8 secretion (69 ± 8.5 pg/ml) was found <xref rid="fig7" ref-type="fig">Fig. 7</xref>B. In these cotransfected cells, S protein expression could be involved in stimulating IL-8 production. In HCoV-229E-infected hTLR2-293 cells and 293cells, production and secretion of IL-8 was detected but activation was not TLR2-specific <xref rid="fig7" ref-type="fig">Fig. 7</xref>A and B. Our results show that SARS S protein in a soluble form increased IL-8 production through hTLR2 ligand interaction.<fig id="fig7"><label>Fig. 7</label><caption><p>S protein is a ligand for human TLR2. Cultures of (A) hTLR2-293, (B) 293 and (C) hACE2-293 cells (1 × 10<sup>6</sup> cells) were stimulated with S (spike) protein (11.2 μM), SARS pseudovirus (3 × 10<sup>5</sup> RLU), supernatant from pSARS pHIV cotransfected 293 cells (3 × 10<sup>6</sup> RLU), or infected with HCoV-229E (MOI = 1). Culture media were collected at 18 h and secreted IL-8 was measured by ELISA. Data are from two or more experiments. <italic>p</italic> = 0.03 for S protein compared with control in hTLR2-293 cells by the paired one-tailed <italic>t</italic>-test.</p></caption><graphic xlink:href="gr7"></graphic></fig></p></sec></sec><sec><label>4</label><title>Discussion</title><p>During the SARS-CoV respiratory syndrome, numerous cytokine and chemokines are induced that attract specialized immune cells to the sites of infection (<xref rid="bib18" ref-type="bibr">He et al., 2006</xref>). An adaptive immune response is initiated that resolves the infection (<xref rid="bib4" ref-type="bibr">Cameron et al., 2007</xref>). Elevated cytokine and immune regulatory gene expression was found in PBMC of patients with SARS (<xref rid="bib49" ref-type="bibr">Yu et al., 2005</xref>). In good agreement with their observations we showed that mRNA abundance of IL-6 and IL-8 cytokines was elevated, as well as CXCL10 ligand (in convalescence). Elevated CXCL10 mRNA contributes to resolution of the infection with neuroadaptive mouse hepatitis virus (MHV) in mouse brain (<xref rid="bib45" ref-type="bibr">Walsh et al., 2008</xref>).</p><p>We showed that treatment of PBMC with S protein (11.2 nM) leads to their activation as indicated by the production and secretion of several inflammatory mediators. The increase in secreted IL-8, MIP-1β (CCL4), IL-6 and IL-1β was statistically significant as detected by ELISA assay. By microaray analysis, IL-8, IL-6 and IL-1β mRNA abundance also increased but MIP-1β mRNA did not increase appreciably.</p><p>To study IL-8 chemokine induction in more detail, PBMC were treated with S protein at various concentrations, and production and secretion of IL-8 over a 24 h period was determined by ELISA. IL-8 levels increased significantly at 3 h post-treatment with S protein at a concentration of 5.6 nM compared to mock-treated controls. This concentration is higher than the levels of binding of S to other functional molecules. ACE2 receptor binds S specifically with 1.7 nM affinity (<xref rid="bib29" ref-type="bibr">Li et al., 2003b</xref>). A highly potent neutralizing monoclonal antibody bound to S and inhibited fusion at 0.32 nM (<xref rid="bib40" ref-type="bibr">Sui et al., 2004</xref>).</p><p>PBMC carry out steady state production of IL-8 from basal levels of IL-8 mRNA since it is also involved in other cellular processes. We found highly variable basal IL-8 levels between different individuals. However, after S protein treatment IL-8 levels were highly elevated. Similarly, <xref rid="bib23" ref-type="bibr">Huang et al. (2006)</xref> found that in acute phase SARS patient sera, levels of IL-8 were highly variable but were significantly different from healthy controls. In genetic studies, differential expression between the IL8 promoter variant alleles showed significant association (<italic>p</italic> < 0.001) with cystic fibrosis lung disease severity (<xref rid="bib21" ref-type="bibr">Hillian et al., 2008</xref>). Our results showed that S protein at concentrations 5.6 nM significantly increased IL-8 mRNA abundance in PBMC. IL-8 production and secretion could be enhanced in PBMC by more than one mechanism including direct activation by S protein and indirect priming via IL-8 receptor which was shown to be increased in SARS patients (<xref rid="bib49" ref-type="bibr">Yu et al., 2005</xref>). Secreted spike could be produced during virus infection (<xref rid="bib35" ref-type="bibr">Pulford and Britton, 1991</xref>).</p><p>We showed that recombinant E protein did not increase IL-8 mRNA abundance. Previously, <xref rid="bib44" ref-type="bibr">Versteeg et al. (2007)</xref> showed that E and M structural proteins expressed from vaccinia virus in L cells did not induce CXCL2, the mouse counterpart of IL-8. The SARS E protein is of interest because it is found on the cell surface late in infection and it traverses the lipid bilayer with its N-terminal portion protruding and detectable with E-specific antibody (<xref rid="bib32" ref-type="bibr">Maeda et al., 2001</xref>).</p><p>Since the SARS syndrome is characterized by an uncontrolled inflammatory response and NF-κB is the major transcription factor activated in acute respiratory distress syndrome (ARDS) (<xref rid="bib14" ref-type="bibr">Fan et al., 2001</xref>), we sought to determine whether S protein-induced IL-8 production is mediated by NF-κB activation. We examined the activity of the NF-κB inhibitor, TPCK. This NF-κB inhibitor acts by inhibiting IKBα protease so that IKBα is not proteolytically degraded and NF-κB is not released to undergo nuclear translocation (<xref rid="bib20" ref-type="bibr">Henkel et al., 1993</xref>). We observed that the addition of TPCK before treatment with S protein significantly inhibited IL-8 secretion suggesting that NF-κB activation was required for S protein-induced IL-8 secretion. TPCK partially inhibited IL-8 secretion in HCoV-229E-infected PBMC and also reduced the virus yield. These effects on HCoV-229E- infected PBMC could be due to inhibition of proteases and possibly to induction of apoptosis (<xref rid="bib50" ref-type="bibr">Zhu et al., 1997</xref>). HCoV-229E spike resembles SARS-CoV spike. Both SARS-CoV and HCoV-229E spikes do not contain furin recognition sites and are uncleaved in the virion (<xref rid="bib27" ref-type="bibr">Li et al., 2006</xref>). Cathepsin L cleavage separates the receptor-binding subunit (S1) from the membrane anchored fusion subunit (<xref rid="bib27" ref-type="bibr">Li et al., 2006</xref>). Both viruses use clathrin-mediated endocytosis for ACE2 or CD13 (human aminopeptidase N) receptor mediated entry (<xref rid="bib48" ref-type="bibr">Yeager et al., 1992</xref>, <xref rid="bib24" ref-type="bibr">Inoue et al., 2007</xref>). Inhibitors of cathepsin L, a cysteine protease, block cell fusion and entry via endocytosis for both viruses (<xref rid="bib3" ref-type="bibr">Bosch et al., 2008</xref>, <xref rid="bib27" ref-type="bibr">Li et al., 2006</xref>; <xref rid="bib26" ref-type="bibr">Kawase et al., 2009</xref>). TPCK is an inhibitor of chymotrypsin-like serine proteases and prevents MHV spike cleavage in L2 cells (<xref rid="bib34" ref-type="bibr">Mizzen et al., 1986</xref>). This class of inhibitors did not block SARS S1 cleavage from the spike trimer (<xref rid="bib23" ref-type="bibr">Huang et al., 2006</xref>). However, Factor Xa, a membrane bound protease, could cleave SARS S protein into functional S1 and S2 subunits and Ben-HCl, an inhibitor of trypsin and serine proteases, inhibited cleavage and effectively blocked viral entry (<xref rid="bib12" ref-type="bibr">Du et al., 2007</xref>). Thus, in addition to NF-κB inhibition, TPCK might prevent S protein cleavage. Further work is necessary to address this issue.</p><p>To verify that nuclear NF-κB activity increased in S protein-treated PBMC, we performed direct measurement of active NF-κB transcription factor binding to consensus DNA sequences. We found a significant increase in nuclear NF-κB p65 transcription factor activity in S protein-treated PBMC and THP-1 cells compared to mock treatment. This indicated that S protein caused a specific activation of NF-κB signaling.</p><p><xref rid="bib5" ref-type="bibr">Chang et al. (2004)</xref> suggested that in hACE2 receptor positive lung epithelial and fibroblast cells, SARS S1 protein induced IL-8 via AP-1 activator through hACE2 signaling. We found that TLR2 expression was sufficient to allow for IL-8 production in response to S protein. TLR2, like all TLRs, activates a common signaling pathway that culminates in the activation of NF-κB (<xref rid="bib1" ref-type="bibr">Barton and Medzhitov, 2003</xref>). TLR2 is predominantly expressed at high levels on macrophages in humans and can be activated by several viruses or viral components (<xref rid="bib15" ref-type="bibr">Finberg et al., 2007</xref>). Plasmacytoid cells use the TLR pathway for viral defense (<xref rid="bib1" ref-type="bibr">Barton and Medzhitov, 2003</xref>). Other cells use cytosolic RNA receptors RIG1-like helicases (RLHs) and MDA-5 (<xref rid="bib43" ref-type="bibr">Uematsu and Akria, 2007</xref>) and nucleic acid recognizing TLRs 3,7,8 and 9 that are critical in the regulation of the production of type 1 IFNs in response to virus infection (<xref rid="bib15" ref-type="bibr">Finberg et al., 2007</xref>). TLR2 is not an IFNβ inducer (<xref rid="bib1" ref-type="bibr">Barton and Medzhitov, 2003</xref>). IFNβ mRNA did not increase in S protein-treated PBMC in our experiments (data not shown). TLR2 mRNA was shown to be increased in PBMC from acute phase SARS patients (<xref rid="bib36" ref-type="bibr">Reghunathan et al., 2005</xref>). Further work is underway to confirm our observations.</p><p>In conclusion, we have provided evidence that S protein induces IL-8 in PBMC in vitro and in THP-1 cells. Others have shown this for lung epithelial cells and fibroblasts (<xref rid="bib5" ref-type="bibr">Chang et al., 2004</xref>). S protein induction was dose dependent. A dose of 5.6 nM per 2 × 10<sup>5</sup> PBMC increased IL-8 secretion significantly compared to mock-treated controls. The ability of S protein to increase IL-8 mRNA was mediated by activation of NF-κB possibly via TLR2 ligand and could be inhibited by the NF-κB inhibitor TPCK. The ability to detect elevated NF-κB transcription factor activity in the nucleus in response to S protein suggests that this most likely occurs by the mechanism of induction. 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