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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome sequence variation analysis of two SARS coronavirus isolates after passage in Vero cell culture</title><author><name sortKey="Jin, Weiwu" sort="Jin, Weiwu" uniqKey="Jin W" first="Weiwu" last="Jin">Weiwu Jin</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Hu, Liangxiang" sort="Hu, Liangxiang" uniqKey="Hu L" first="Liangxiang" last="Hu">Liangxiang Hu</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Du, Zhenglin" sort="Du, Zhenglin" uniqKey="Du Z" first="Zhenglin" last="Du">Zhenglin Du</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Gao, Qiang" sort="Gao, Qiang" uniqKey="Gao Q" first="Qiang" last="Gao">Qiang Gao</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Gao, Hong" sort="Gao, Hong" uniqKey="Gao H" first="Hong" last="Gao">Hong Gao</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Ning, Ye" sort="Ning, Ye" uniqKey="Ning Y" first="Ye" last="Ning">Ye Ning</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Feng, Jidong" sort="Feng, Jidong" uniqKey="Feng J" first="Jidong" last="Feng">Jidong Feng</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Zhang, Jiansan" sort="Zhang, Jiansan" uniqKey="Zhang J" first="Jiansan" last="Zhang">Jiansan Zhang</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Yin, Weidong" sort="Yin, Weidong" uniqKey="Yin W" first="Weidong" last="Yin">Weidong Yin</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Li, Ning" sort="Li, Ning" uniqKey="Li N" first="Ning" last="Li">Ning Li</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">32214713</idno><idno type="pmc">7089035</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7089035</idno><idno type="RBID">PMC:7089035</idno><idno type="doi">10.1007/BF03183408</idno><date when="2004">2004</date><idno type="wicri:Area/Pmc/Corpus">000356</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000356</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome sequence variation analysis of two SARS coronavirus isolates after passage in Vero cell culture</title><author><name sortKey="Jin, Weiwu" sort="Jin, Weiwu" uniqKey="Jin W" first="Weiwu" last="Jin">Weiwu Jin</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Hu, Liangxiang" sort="Hu, Liangxiang" uniqKey="Hu L" first="Liangxiang" last="Hu">Liangxiang Hu</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Du, Zhenglin" sort="Du, Zhenglin" uniqKey="Du Z" first="Zhenglin" last="Du">Zhenglin Du</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Gao, Qiang" sort="Gao, Qiang" uniqKey="Gao Q" first="Qiang" last="Gao">Qiang Gao</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Gao, Hong" sort="Gao, Hong" uniqKey="Gao H" first="Hong" last="Gao">Hong Gao</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Ning, Ye" sort="Ning, Ye" uniqKey="Ning Y" first="Ye" last="Ning">Ye Ning</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Feng, Jidong" sort="Feng, Jidong" uniqKey="Feng J" first="Jidong" last="Feng">Jidong Feng</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Zhang, Jiansan" sort="Zhang, Jiansan" uniqKey="Zhang J" first="Jiansan" last="Zhang">Jiansan Zhang</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Yin, Weidong" sort="Yin, Weidong" uniqKey="Yin W" first="Weidong" last="Yin">Weidong Yin</name><affiliation><nlm:aff id="Aff2">Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</nlm:aff></affiliation></author><author><name sortKey="Li, Ning" sort="Li, Ning" uniqKey="Li N" first="Ning" last="Li">Ning Li</name><affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</nlm:aff></affiliation></author></analytic><series><title level="j">Chinese Science Bulletin = Kexue Tongbao</title><idno type="ISSN">1001-6538</idno><idno type="eISSN">1861-9541</idno><imprint><date when="2004">2004</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>SARS coronavirus is an RNA virus whose replication is error-prone, which provides possibility for escape of host defenses, and even leads to evolution of new viral strains during the passage or the transmission. Lots of variations have been detected among different SARS-CoV strains. And a study on these variations is helpful for development of efficient vaccine. Moreover, the test of nucleic acid characterization and genetic stability of SARS-CoV is important in the research of inactivated vaccine. The whole genome sequences of two SARS coronavirus strains after passage in Vero cell culture were determined and were compared with those of early passages, respectively. Results showed that both SARS coronavirus strains have high genetic stability, although nearly 10 generations were passed. Four nucleotide variations were observed between the second passage and the 11th passage of Sino1 strain for identification of SARS inactivated vaccine. Moreover, only one nucleotide was different between the third passage and the 10th passage of Sino3 strain for SARS inactivated vaccine. Therefore, this study suggested it was possible to develop inactivated vaccine against SARS-CoV in the future.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Rota, P A" uniqKey="Rota P">P. A. Rota</name></author><author><name sortKey="Oberste, S M" uniqKey="Oberste S">S. M. Oberste</name></author><author><name sortKey="Monroe, S S" uniqKey="Monroe S">S. S. Monroe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marra, M A" uniqKey="Marra M">M. A. Marra</name></author><author><name sortKey="Jones, S J" uniqKey="Jones S">S. J. Jones</name></author><author><name sortKey="Astell, C R" uniqKey="Astell C">C. R. Astell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Qin, E D" uniqKey="Qin E">E. D. Qin</name></author><author><name sortKey="Zhu, Q Y" uniqKey="Zhu Q">Q. Y. Zhu</name></author><author><name sortKey="Yu, M" uniqKey="Yu M">M. Yu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Snijder, E J" uniqKey="Snijder E">E. J. Snijder</name></author><author><name sortKey="Bredenbeek, P J" uniqKey="Bredenbeek P">P. J. Bredenbeek</name></author><author><name sortKey="Dobbe, J C" uniqKey="Dobbe J">J. C. Dobbe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jin, W W" uniqKey="Jin W">W. W. Jin</name></author><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y. Zhang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Guan, Y" uniqKey="Guan Y">Y. Guan</name></author><author><name sortKey="Zheng, B J" uniqKey="Zheng B">B. J. Zheng</name></author><author><name sortKey="He, Y Q" uniqKey="He Y">Y. Q. He</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Ruan, Y J" uniqKey="Ruan Y">Y. J. Ruan</name></author><author><name sortKey="Wei, C L" uniqKey="Wei C">C. L. Wei</name></author><author><name sortKey="Ling, A E" uniqKey="Ling A">A. E. Ling</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="De Groot, A S" uniqKey="De Groot A">A. S. De Groot</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yeh, S H" uniqKey="Yeh S">S. H. Yeh</name></author><author><name sortKey="Wang, H Y" uniqKey="Wang H">H. Y. Wang</name></author><author><name sortKey="Tsai, C Y" uniqKey="Tsai C">C. Y. Tsai</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yount, B" uniqKey="Yount B">B. Yount</name></author><author><name sortKey="Curtis, K M" uniqKey="Curtis K">K. M. Curtis</name></author><author><name sortKey="Fritz, E A" uniqKey="Fritz E">E. A. Fritz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chim, S S C" uniqKey="Chim S">S. S. C. Chim</name></author><author><name sortKey="Tsui, S K W" uniqKey="Tsui S">S. K. W. Tsui</name></author><author><name sortKey="Hung, E C W" uniqKey="Hung E">E. C. W. Hung</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Spiga, O" uniqKey="Spiga O">O. Spiga</name></author><author><name sortKey="Bernini, A" uniqKey="Bernini A">A. Bernini</name></author><author><name sortKey="Ciutti, A" uniqKey="Ciutti A">A. Ciutti</name></author></analytic></biblStruct></listBibl></div1></back></TEI><pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Chin Sci Bull</journal-id><journal-id journal-id-type="iso-abbrev">Chin. Sci. Bull</journal-id><journal-title-group><journal-title>Chinese Science Bulletin = Kexue Tongbao</journal-title></journal-title-group><issn pub-type="ppub">1001-6538</issn><issn pub-type="epub">1861-9541</issn><publisher><publisher-name>Science in China Press</publisher-name><publisher-loc>Beijing</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">32214713</article-id><article-id pub-id-type="pmc">7089035</article-id><article-id pub-id-type="publisher-id">BF03183408</article-id><article-id pub-id-type="doi">10.1007/BF03183408</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group></article-categories><title-group><article-title>Genome sequence variation analysis of two SARS coronavirus isolates after passage in Vero cell culture</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Jin</surname><given-names>Weiwu</given-names></name><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Hu</surname><given-names>Liangxiang</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Du</surname><given-names>Zhenglin</given-names></name><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Gao</surname><given-names>Qiang</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Gao</surname><given-names>Hong</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Ning</surname><given-names>Ye</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Feng</surname><given-names>Jidong</given-names></name><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Zhang</surname><given-names>Jiansan</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Yin</surname><given-names>Weidong</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author" corresp="yes"><name><surname>Li</surname><given-names>Ning</given-names></name><address><email>ninglbau@public3.bta.net.cn</email></address><xref ref-type="aff" rid="Aff1">1</xref></contrib><aff id="Aff1"><label>1</label><institution-wrap><institution-id institution-id-type="GRID">grid.22935.3f</institution-id><institution-id institution-id-type="ISNI">0000000405308290</institution-id><institution>State Key Laboratory for Agrobiotechnology,</institution><institution>China Agricultural University,</institution></institution-wrap>100094 Beijing, China</aff><aff id="Aff2"><label>2</label>Sino Biotech Co., Ltd., No. 39 Shangdi Xi Rd. Haidian District, 100085 Beijing, China</aff></contrib-group><pub-date pub-type="ppub"><year>2004</year></pub-date><volume>49</volume><issue>17</issue><fpage>1824</fpage><lpage>1827</lpage><history><date date-type="received"><day>15</day><month>5</month><year>2004</year></date><date date-type="accepted"><day>24</day><month>7</month><year>2004</year></date></history><permissions><copyright-statement>© Science in China Press 2004</copyright-statement><license><license-p>This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.</license-p></license></permissions><abstract id="Abs1"><p>SARS coronavirus is an RNA virus whose replication is error-prone, which provides possibility for escape of host defenses, and even leads to evolution of new viral strains during the passage or the transmission. Lots of variations have been detected among different SARS-CoV strains. And a study on these variations is helpful for development of efficient vaccine. Moreover, the test of nucleic acid characterization and genetic stability of SARS-CoV is important in the research of inactivated vaccine. The whole genome sequences of two SARS coronavirus strains after passage in Vero cell culture were determined and were compared with those of early passages, respectively. Results showed that both SARS coronavirus strains have high genetic stability, although nearly 10 generations were passed. Four nucleotide variations were observed between the second passage and the 11th passage of Sino1 strain for identification of SARS inactivated vaccine. Moreover, only one nucleotide was different between the third passage and the 10th passage of Sino3 strain for SARS inactivated vaccine. 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