An emergent clade of SARS-CoV-2 linked to returned travellers from Iran
Identifieur interne : 003A96 ( Ncbi/Merge ); précédent : 003A95; suivant : 003A97An emergent clade of SARS-CoV-2 linked to returned travellers from Iran
Auteurs : John-Sebastian Eden [Australie] ; Rebecca Rockett [Australie] ; Ian Carter [Australie] ; Hossinur Rahman [Australie] ; Joep De Ligt [Nouvelle-Zélande] ; James Hadfield [États-Unis] ; Matthew Storey [Nouvelle-Zélande] ; Xiaoyun Ren [Nouvelle-Zélande] ; Rachel Tulloch [Australie] ; Kerri Basile [Australie] ; Jessica Wells [Australie] ; Roy Byun [Australie] ; Nicky Gilroy [Australie] ; Matthew V. O Ullivan [Australie] ; Vitali Sintchenko [Australie] ; Sharon C. Chen [Australie] ; Susan Maddocks [Australie] ; Tania C. Sorrell [Australie] ; Edward C. Holmes [Australie] ; Dominic E. Dwyer [Australie] ; Jen Kok [Australie]Source :
- Virus Evolution [ 2057-1577 ] ; 2020.
Abstract
The SARS-CoV-2 epidemic has rapidly spread outside China with major outbreaks occurring in Italy, South Korea, and Iran. Phylogenetic analyses of whole-genome sequencing data identified a distinct SARS-CoV-2 clade linked to travellers returning from Iran to Australia and New Zealand. This study highlights potential viral diversity driving the epidemic in Iran, and underscores the power of rapid genome sequencing and public data sharing to improve the detection and management of emerging infectious diseases.
Url:
DOI: 10.1093/ve/veaa027
PubMed: 32296544
PubMed Central: 7147362
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Sorrell</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. 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Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country 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Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rockett, Rebecca" sort="Rockett, Rebecca" uniqKey="Rockett R" first="Rebecca" last="Rockett">Rebecca Rockett</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Carter, Ian" sort="Carter, Ian" uniqKey="Carter I" first="Ian" last="Carter">Ian Carter</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rahman, Hossinur" sort="Rahman, Hossinur" uniqKey="Rahman H" first="Hossinur" last="Rahman">Hossinur Rahman</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="De Ligt, Joep" sort="De Ligt, Joep" uniqKey="De Ligt J" first="Joep" last="De Ligt">Joep De Ligt</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Hadfield, James" sort="Hadfield, James" uniqKey="Hadfield J" first="James" last="Hadfield">James Hadfield</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff6"><institution>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center</institution>, Seattle, WA 98109,<country country="US">USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Storey, Matthew" sort="Storey, Matthew" uniqKey="Storey M" first="Matthew" last="Storey">Matthew Storey</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Ren, Xiaoyun" sort="Ren, Xiaoyun" uniqKey="Ren X" first="Xiaoyun" last="Ren">Xiaoyun Ren</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Tulloch, Rachel" sort="Tulloch, Rachel" uniqKey="Tulloch R" first="Rachel" last="Tulloch">Rachel Tulloch</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Basile, Kerri" sort="Basile, Kerri" uniqKey="Basile K" first="Kerri" last="Basile">Kerri Basile</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wells, Jessica" sort="Wells, Jessica" uniqKey="Wells J" first="Jessica" last="Wells">Jessica Wells</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Byun, Roy" sort="Byun, Roy" uniqKey="Byun R" first="Roy" last="Byun">Roy Byun</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff7"><institution>NSW Ministry of Health</institution>, North Sydney, NSW 2059,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Gilroy, Nicky" sort="Gilroy, Nicky" uniqKey="Gilroy N" first="Nicky" last="Gilroy">Nicky Gilroy</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="O Ullivan, Matthew V" sort="O Ullivan, Matthew V" uniqKey="O Ullivan M" first="Matthew V" last="O Ullivan">Matthew V. O Ullivan</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sintchenko, Vitali" sort="Sintchenko, Vitali" uniqKey="Sintchenko V" first="Vitali" last="Sintchenko">Vitali Sintchenko</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Chen, Sharon C" sort="Chen, Sharon C" uniqKey="Chen S" first="Sharon C" last="Chen">Sharon C. Chen</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Maddocks, Susan" sort="Maddocks, Susan" uniqKey="Maddocks S" first="Susan" last="Maddocks">Susan Maddocks</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sorrell, Tania C" sort="Sorrell, Tania C" uniqKey="Sorrell T" first="Tania C" last="Sorrell">Tania C. Sorrell</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. Dwyer</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Virus Evolution</title><idno type="eISSN">2057-1577</idno><imprint><date when="2020">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Abstract</title><p>The SARS-CoV-2 epidemic has rapidly spread outside China with major outbreaks occurring in Italy, South Korea, and Iran. Phylogenetic analyses of whole-genome sequencing data identified a distinct SARS-CoV-2 clade linked to travellers returning from Iran to Australia and New Zealand. This study highlights potential viral diversity driving the epidemic in Iran, and underscores the power of rapid genome sequencing and public data sharing to improve the detection and management of emerging infectious diseases.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Di Giallonardo, F" uniqKey="Di Giallonardo F">F. Di Giallonardo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dong, E" uniqKey="Dong E">E. Dong</name></author><author><name sortKey="Du, H" uniqKey="Du H">H. Du</name></author><author><name sortKey="Gardner, L" uniqKey="Gardner L">L. Gardner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dudas, G" uniqKey="Dudas G">G. 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Lu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Popovich, K J" uniqKey="Popovich K">K. J. Popovich</name></author><author><name sortKey="Snitkin, E S" uniqKey="Snitkin E">E. S. Snitkin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Quick, J" uniqKey="Quick J">J. Quick</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shu, Y" uniqKey="Shu Y">Y. Shu</name></author><author><name sortKey="Mccauley, J" uniqKey="Mccauley J">J. McCauley</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Wu, F" uniqKey="Wu F">F. Wu</name></author></analytic></biblStruct><biblStruct></biblStruct></listBibl></div1></back></TEI><double pmid="32296544"><pmc><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">An emergent clade of SARS-CoV-2 linked to returned travellers from Iran</title><author><name sortKey="Eden, John Sebastian" sort="Eden, John Sebastian" uniqKey="Eden J" first="John-Sebastian" last="Eden">John-Sebastian Eden</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rockett, Rebecca" sort="Rockett, Rebecca" uniqKey="Rockett R" first="Rebecca" last="Rockett">Rebecca Rockett</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Carter, Ian" sort="Carter, Ian" uniqKey="Carter I" first="Ian" last="Carter">Ian Carter</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rahman, Hossinur" sort="Rahman, Hossinur" uniqKey="Rahman H" first="Hossinur" last="Rahman">Hossinur Rahman</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="De Ligt, Joep" sort="De Ligt, Joep" uniqKey="De Ligt J" first="Joep" last="De Ligt">Joep De Ligt</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Hadfield, James" sort="Hadfield, James" uniqKey="Hadfield J" first="James" last="Hadfield">James Hadfield</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff6"><institution>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center</institution>, Seattle, WA 98109,<country country="US">USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Storey, Matthew" sort="Storey, Matthew" uniqKey="Storey M" first="Matthew" last="Storey">Matthew Storey</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Ren, Xiaoyun" sort="Ren, Xiaoyun" uniqKey="Ren X" first="Xiaoyun" last="Ren">Xiaoyun Ren</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Tulloch, Rachel" sort="Tulloch, Rachel" uniqKey="Tulloch R" first="Rachel" last="Tulloch">Rachel Tulloch</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Basile, Kerri" sort="Basile, Kerri" uniqKey="Basile K" first="Kerri" last="Basile">Kerri Basile</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wells, Jessica" sort="Wells, Jessica" uniqKey="Wells J" first="Jessica" last="Wells">Jessica Wells</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Byun, Roy" sort="Byun, Roy" uniqKey="Byun R" first="Roy" last="Byun">Roy Byun</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff7"><institution>NSW Ministry of Health</institution>, North Sydney, NSW 2059,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Gilroy, Nicky" sort="Gilroy, Nicky" uniqKey="Gilroy N" first="Nicky" last="Gilroy">Nicky Gilroy</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="O Ullivan, Matthew V" sort="O Ullivan, Matthew V" uniqKey="O Ullivan M" first="Matthew V" last="O Ullivan">Matthew V. O Ullivan</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sintchenko, Vitali" sort="Sintchenko, Vitali" uniqKey="Sintchenko V" first="Vitali" last="Sintchenko">Vitali Sintchenko</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Chen, Sharon C" sort="Chen, Sharon C" uniqKey="Chen S" first="Sharon C" last="Chen">Sharon C. Chen</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Maddocks, Susan" sort="Maddocks, Susan" uniqKey="Maddocks S" first="Susan" last="Maddocks">Susan Maddocks</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sorrell, Tania C" sort="Sorrell, Tania C" uniqKey="Sorrell T" first="Tania C" last="Sorrell">Tania C. Sorrell</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. Dwyer</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">32296544</idno><idno type="pmc">7147362</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7147362</idno><idno type="RBID">PMC:7147362</idno><idno type="doi">10.1093/ve/veaa027</idno><date when="2020">2020</date><idno type="wicri:Area/Pmc/Corpus">001582</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001582</idno><idno type="wicri:Area/Pmc/Curation">001582</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001582</idno><idno type="wicri:Area/Pmc/Checkpoint">000398</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000398</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">An emergent clade of SARS-CoV-2 linked to returned travellers from Iran</title><author><name sortKey="Eden, John Sebastian" sort="Eden, John Sebastian" uniqKey="Eden J" first="John-Sebastian" last="Eden">John-Sebastian Eden</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rockett, Rebecca" sort="Rockett, Rebecca" uniqKey="Rockett R" first="Rebecca" last="Rockett">Rebecca Rockett</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Carter, Ian" sort="Carter, Ian" uniqKey="Carter I" first="Ian" last="Carter">Ian Carter</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Rahman, Hossinur" sort="Rahman, Hossinur" uniqKey="Rahman H" first="Hossinur" last="Rahman">Hossinur Rahman</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="De Ligt, Joep" sort="De Ligt, Joep" uniqKey="De Ligt J" first="Joep" last="De Ligt">Joep De Ligt</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Hadfield, James" sort="Hadfield, James" uniqKey="Hadfield J" first="James" last="Hadfield">James Hadfield</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff6"><institution>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center</institution>, Seattle, WA 98109,<country country="US">USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Storey, Matthew" sort="Storey, Matthew" uniqKey="Storey M" first="Matthew" last="Storey">Matthew Storey</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Ren, Xiaoyun" sort="Ren, Xiaoyun" uniqKey="Ren X" first="Xiaoyun" last="Ren">Xiaoyun Ren</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff5"><institution>Institute of Environmental Science and Research</institution>, Porirua 5240,<country country="NZ">New Zealand</country></nlm:aff><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Tulloch, Rachel" sort="Tulloch, Rachel" uniqKey="Tulloch R" first="Rachel" last="Tulloch">Rachel Tulloch</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Basile, Kerri" sort="Basile, Kerri" uniqKey="Basile K" first="Kerri" last="Basile">Kerri Basile</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wells, Jessica" sort="Wells, Jessica" uniqKey="Wells J" first="Jessica" last="Wells">Jessica Wells</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Byun, Roy" sort="Byun, Roy" uniqKey="Byun R" first="Roy" last="Byun">Roy Byun</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff7"><institution>NSW Ministry of Health</institution>, North Sydney, NSW 2059,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Gilroy, Nicky" sort="Gilroy, Nicky" uniqKey="Gilroy N" first="Nicky" last="Gilroy">Nicky Gilroy</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="O Ullivan, Matthew V" sort="O Ullivan, Matthew V" uniqKey="O Ullivan M" first="Matthew V" last="O Ullivan">Matthew V. O Ullivan</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sintchenko, Vitali" sort="Sintchenko, Vitali" uniqKey="Sintchenko V" first="Vitali" last="Sintchenko">Vitali Sintchenko</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Chen, Sharon C" sort="Chen, Sharon C" uniqKey="Chen S" first="Sharon C" last="Chen">Sharon C. Chen</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Maddocks, Susan" sort="Maddocks, Susan" uniqKey="Maddocks S" first="Susan" last="Maddocks">Susan Maddocks</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sorrell, Tania C" sort="Sorrell, Tania C" uniqKey="Sorrell T" first="Tania C" last="Sorrell">Tania C. Sorrell</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff2"><institution>Centre for Virus Research & Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical Research</institution>, PO Box 412, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. Dwyer</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff1"><institution>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney</institution>, Sydney, NSW 2006,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:aff id="veaa027-aff3"><institution>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology – Institute of Clinical Pathology and Medical Research</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="veaa027-aff4"><institution>Centre for Infectious Diseases and Microbiology – Public Health, Westmead Hospital</institution>, Westmead, NSW 2145,<country country="AU">Australia</country></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Virus Evolution</title><idno type="eISSN">2057-1577</idno><imprint><date when="2020">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Abstract</title><p>The SARS-CoV-2 epidemic has rapidly spread outside China with major outbreaks occurring in Italy, South Korea, and Iran. Phylogenetic analyses of whole-genome sequencing data identified a distinct SARS-CoV-2 clade linked to travellers returning from Iran to Australia and New Zealand. This study highlights potential viral diversity driving the epidemic in Iran, and underscores the power of rapid genome sequencing and public data sharing to improve the detection and management of emerging infectious diseases.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Di Giallonardo, F" uniqKey="Di Giallonardo F">F. Di Giallonardo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dong, E" uniqKey="Dong E">E. Dong</name></author><author><name sortKey="Du, H" uniqKey="Du H">H. Du</name></author><author><name sortKey="Gardner, L" uniqKey="Gardner L">L. Gardner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dudas, G" uniqKey="Dudas G">G. 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Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Rahman, Hossinur" sort="Rahman, Hossinur" uniqKey="Rahman H" first="Hossinur" last="Rahman">Hossinur Rahman</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="De Ligt, Joep" sort="De Ligt, Joep" uniqKey="De Ligt J" first="Joep" last="De Ligt">Joep De Ligt</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Hadfield, James" sort="Hadfield, James" uniqKey="Hadfield J" first="James" last="Hadfield">James Hadfield</name><affiliation wicri:level="2"><nlm:affiliation>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109</wicri:regionArea><placeName><region type="state">Washington (État)</region></placeName></affiliation></author><author><name sortKey="Storey, Matthew" sort="Storey, Matthew" uniqKey="Storey M" first="Matthew" last="Storey">Matthew Storey</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Ren, Xiaoyun" sort="Ren, Xiaoyun" uniqKey="Ren X" first="Xiaoyun" last="Ren">Xiaoyun Ren</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Tulloch, Rachel" sort="Tulloch, Rachel" uniqKey="Tulloch R" first="Rachel" last="Tulloch">Rachel Tulloch</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Basile, Kerri" sort="Basile, Kerri" uniqKey="Basile K" first="Kerri" last="Basile">Kerri Basile</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Wells, Jessica" sort="Wells, Jessica" uniqKey="Wells J" first="Jessica" last="Wells">Jessica Wells</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Byun, Roy" sort="Byun, Roy" uniqKey="Byun R" first="Roy" last="Byun">Roy Byun</name><affiliation wicri:level="1"><nlm:affiliation>NSW Ministry of Health, North Sydney, NSW 2059, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>NSW Ministry of Health, North Sydney, NSW 2059</wicri:regionArea><wicri:noRegion>NSW 2059</wicri:noRegion></affiliation></author><author><name sortKey="Gilroy, Nicky" sort="Gilroy, Nicky" uniqKey="Gilroy N" first="Nicky" last="Gilroy">Nicky Gilroy</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="O Sullivan, Matthew V" sort="O Sullivan, Matthew V" uniqKey="O Sullivan M" first="Matthew V" last="O'Sullivan">Matthew V. O'Sullivan</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Sintchenko, Vitali" sort="Sintchenko, Vitali" uniqKey="Sintchenko V" first="Vitali" last="Sintchenko">Vitali Sintchenko</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Chen, Sharon C" sort="Chen, Sharon C" uniqKey="Chen S" first="Sharon C" last="Chen">Sharon C. Chen</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Maddocks, Susan" sort="Maddocks, Susan" uniqKey="Maddocks S" first="Susan" last="Maddocks">Susan Maddocks</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Sorrell, Tania C" sort="Sorrell, Tania C" uniqKey="Sorrell T" first="Tania C" last="Sorrell">Tania C. Sorrell</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. Dwyer</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:32296544</idno><idno type="pmid">32296544</idno><idno type="doi">10.1093/ve/veaa027</idno><idno type="wicri:Area/PubMed/Corpus">000098</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000098</idno><idno type="wicri:Area/PubMed/Curation">000098</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000098</idno><idno type="wicri:Area/PubMed/Checkpoint">000795</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000795</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">An emergent clade of SARS-CoV-2 linked to returned travellers from Iran.</title><author><name sortKey="Eden, John Sebastian" sort="Eden, John Sebastian" uniqKey="Eden J" first="John-Sebastian" last="Eden">John-Sebastian Eden</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Rockett, Rebecca" sort="Rockett, Rebecca" uniqKey="Rockett R" first="Rebecca" last="Rockett">Rebecca Rockett</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Carter, Ian" sort="Carter, Ian" uniqKey="Carter I" first="Ian" last="Carter">Ian Carter</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Rahman, Hossinur" sort="Rahman, Hossinur" uniqKey="Rahman H" first="Hossinur" last="Rahman">Hossinur Rahman</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="De Ligt, Joep" sort="De Ligt, Joep" uniqKey="De Ligt J" first="Joep" last="De Ligt">Joep De Ligt</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Hadfield, James" sort="Hadfield, James" uniqKey="Hadfield J" first="James" last="Hadfield">James Hadfield</name><affiliation wicri:level="2"><nlm:affiliation>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109</wicri:regionArea><placeName><region type="state">Washington (État)</region></placeName></affiliation></author><author><name sortKey="Storey, Matthew" sort="Storey, Matthew" uniqKey="Storey M" first="Matthew" last="Storey">Matthew Storey</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Ren, Xiaoyun" sort="Ren, Xiaoyun" uniqKey="Ren X" first="Xiaoyun" last="Ren">Xiaoyun Ren</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Environmental Science and Research, Porirua 5240, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Institute of Environmental Science and Research, Porirua 5240</wicri:regionArea><wicri:noRegion>Porirua 5240</wicri:noRegion></affiliation></author><author><name sortKey="Tulloch, Rachel" sort="Tulloch, Rachel" uniqKey="Tulloch R" first="Rachel" last="Tulloch">Rachel Tulloch</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Basile, Kerri" sort="Basile, Kerri" uniqKey="Basile K" first="Kerri" last="Basile">Kerri Basile</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Wells, Jessica" sort="Wells, Jessica" uniqKey="Wells J" first="Jessica" last="Wells">Jessica Wells</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Byun, Roy" sort="Byun, Roy" uniqKey="Byun R" first="Roy" last="Byun">Roy Byun</name><affiliation wicri:level="1"><nlm:affiliation>NSW Ministry of Health, North Sydney, NSW 2059, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>NSW Ministry of Health, North Sydney, NSW 2059</wicri:regionArea><wicri:noRegion>NSW 2059</wicri:noRegion></affiliation></author><author><name sortKey="Gilroy, Nicky" sort="Gilroy, Nicky" uniqKey="Gilroy N" first="Nicky" last="Gilroy">Nicky Gilroy</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="O Sullivan, Matthew V" sort="O Sullivan, Matthew V" uniqKey="O Sullivan M" first="Matthew V" last="O'Sullivan">Matthew V. O'Sullivan</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Sintchenko, Vitali" sort="Sintchenko, Vitali" uniqKey="Sintchenko V" first="Vitali" last="Sintchenko">Vitali Sintchenko</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Chen, Sharon C" sort="Chen, Sharon C" uniqKey="Chen S" first="Sharon C" last="Chen">Sharon C. Chen</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Maddocks, Susan" sort="Maddocks, Susan" uniqKey="Maddocks S" first="Susan" last="Maddocks">Susan Maddocks</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author><author><name sortKey="Sorrell, Tania C" sort="Sorrell, Tania C" uniqKey="Sorrell T" first="Tania C" last="Sorrell">Tania C. Sorrell</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C" last="Holmes">Edward C. Holmes</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Dwyer, Dominic E" sort="Dwyer, Dominic E" uniqKey="Dwyer D" first="Dominic E" last="Dwyer">Dominic E. Dwyer</name><affiliation wicri:level="4"><nlm:affiliation>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences & School of Medical Sciences, The University of Sydney, Sydney, NSW 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Kok, Jen" sort="Kok, Jen" uniqKey="Kok J" first="Jen" last="Kok">Jen Kok</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145</wicri:regionArea><wicri:noRegion>NSW 2145</wicri:noRegion></affiliation></author></analytic><series><title level="j">Virus evolution</title><idno type="ISSN">2057-1577</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The SARS-CoV-2 epidemic has rapidly spread outside China with major outbreaks occurring in Italy, South Korea, and Iran. Phylogenetic analyses of whole-genome sequencing data identified a distinct SARS-CoV-2 clade linked to travellers returning from Iran to Australia and New Zealand. This study highlights potential viral diversity driving the epidemic in Iran, and underscores the power of rapid genome sequencing and public data sharing to improve the detection and management of emerging infectious diseases.</div></front></TEI></pubmed></double></record>Pour manipuler ce document sous Unix (Dilib)
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