A G-quadruplex-binding macrodomain within the "SARS-unique domain" is essential for the activity of the SARS-coronavirus replication-transcription complex.
Identifieur interne : 002A93 ( Ncbi/Merge ); précédent : 002A92; suivant : 002A94A G-quadruplex-binding macrodomain within the "SARS-unique domain" is essential for the activity of the SARS-coronavirus replication-transcription complex.
Auteurs : Yuri Kusov [Allemagne] ; Jinzhi Tan [Allemagne] ; Enrique Alvarez [Espagne] ; Luis Enjuanes [Espagne] ; Rolf Hilgenfeld [Allemagne]Source :
- Virology [ 1096-0341 ] ; 2015.
Descripteurs français
- KwdFr :
- Coloration et marquage, Délétion de séquence, Gènes rapporteurs, Génétique inverse, Luciférases de Renilla (analyse), Luciférases de Renilla (génétique), Protéines virales non structurales (génétique), Protéines virales non structurales (métabolisme), Réplication virale, Structure tertiaire des protéines, Substitution d'acide aminé, Transcription génétique, Virus du SRAS (génétique), Virus du SRAS (physiologie).
- MESH :
- analyse : Luciférases de Renilla.
- génétique : Luciférases de Renilla, Protéines virales non structurales, Virus du SRAS.
- métabolisme : Protéines virales non structurales.
- physiologie : Virus du SRAS.
- Coloration et marquage, Délétion de séquence, Gènes rapporteurs, Génétique inverse, Réplication virale, Structure tertiaire des protéines, Substitution d'acide aminé, Transcription génétique.
English descriptors
- KwdEn :
- Amino Acid Substitution, Genes, Reporter, Luciferases, Renilla (analysis), Luciferases, Renilla (genetics), Protein Structure, Tertiary, Reverse Genetics, SARS Virus (genetics), SARS Virus (physiology), Sequence Deletion, Staining and Labeling, Transcription, Genetic, Viral Nonstructural Proteins (genetics), Viral Nonstructural Proteins (metabolism), Virus Replication.
- MESH :
- chemical , analysis : Luciferases, Renilla.
- chemical , genetics : Luciferases, Renilla, Viral Nonstructural Proteins.
- genetics : SARS Virus.
- chemical , metabolism : Viral Nonstructural Proteins.
- physiology : SARS Virus.
- Amino Acid Substitution, Genes, Reporter, Protein Structure, Tertiary, Reverse Genetics, Sequence Deletion, Staining and Labeling, Transcription, Genetic, Virus Replication.
Abstract
The multi-domain non-structural protein 3 of SARS-coronavirus is a component of the viral replication/transcription complex (RTC). Among other domains, it contains three sequentially arranged macrodomains: the X domain and subdomains SUD-N as well as SUD-M within the "SARS-unique domain". The X domain was proposed to be an ADP-ribose-1"-phosphatase or a poly(ADP-ribose)-binding protein, whereas SUD-NM binds oligo(G)-nucleotides capable of forming G-quadruplexes. Here, we describe the application of a reverse genetic approach to assess the importance of these macrodomains for the activity of the SARS-CoV RTC. To this end, Renilla luciferase-encoding SARS-CoV replicons with selectively deleted macrodomains were constructed and their ability to modulate the RTC activity was examined. While the SUD-N and the X domains were found to be dispensable, the SUD-M domain was crucial for viral genome replication/transcription. Moreover, alanine replacement of charged amino-acid residues of the SUD-M domain, which are likely involved in G-quadruplex-binding, caused abrogation of RTC activity.
DOI: 10.1016/j.virol.2015.06.016
PubMed: 26149721
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 000E04
- to stream PubMed, to step Curation: 000E04
- to stream PubMed, to step Checkpoint: 000E73
Links to Exploration step
pubmed:26149721Le document en format XML
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<front><div type="abstract" xml:lang="en">The multi-domain non-structural protein 3 of SARS-coronavirus is a component of the viral replication/transcription complex (RTC). Among other domains, it contains three sequentially arranged macrodomains: the X domain and subdomains SUD-N as well as SUD-M within the "SARS-unique domain". The X domain was proposed to be an ADP-ribose-1"-phosphatase or a poly(ADP-ribose)-binding protein, whereas SUD-NM binds oligo(G)-nucleotides capable of forming G-quadruplexes. Here, we describe the application of a reverse genetic approach to assess the importance of these macrodomains for the activity of the SARS-CoV RTC. To this end, Renilla luciferase-encoding SARS-CoV replicons with selectively deleted macrodomains were constructed and their ability to modulate the RTC activity was examined. While the SUD-N and the X domains were found to be dispensable, the SUD-M domain was crucial for viral genome replication/transcription. Moreover, alanine replacement of charged amino-acid residues of the SUD-M domain, which are likely involved in G-quadruplex-binding, caused abrogation of RTC activity.</div>
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<Abstract><AbstractText>The multi-domain non-structural protein 3 of SARS-coronavirus is a component of the viral replication/transcription complex (RTC). Among other domains, it contains three sequentially arranged macrodomains: the X domain and subdomains SUD-N as well as SUD-M within the "SARS-unique domain". The X domain was proposed to be an ADP-ribose-1"-phosphatase or a poly(ADP-ribose)-binding protein, whereas SUD-NM binds oligo(G)-nucleotides capable of forming G-quadruplexes. Here, we describe the application of a reverse genetic approach to assess the importance of these macrodomains for the activity of the SARS-CoV RTC. To this end, Renilla luciferase-encoding SARS-CoV replicons with selectively deleted macrodomains were constructed and their ability to modulate the RTC activity was examined. While the SUD-N and the X domains were found to be dispensable, the SUD-M domain was crucial for viral genome replication/transcription. Moreover, alanine replacement of charged amino-acid residues of the SUD-M domain, which are likely involved in G-quadruplex-binding, caused abrogation of RTC activity.</AbstractText>
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