SARS-Coronavirus ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory
Identifieur interne : 002359 ( Ncbi/Merge ); précédent : 002358; suivant : 002360SARS-Coronavirus ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory
Auteurs : Meriadeg Ar Gouilh [France, Thaïlande] ; Sébastien J. Puechmaille [Irlande (pays)] ; Jean-Paul Gonzalez [Gabon] ; Emma Teeling [Irlande (pays)] ; Pattamaporn Kittayapong [Thaïlande] ; Jean-Claude Manuguerra [France]Source :
- Infection, Genetics and Evolution [ 1567-1348 ] ; 2011.
Descripteurs français
- KwdFr :
- ARN viral (génétique), Animaux, Asie du Sud-Est, Chiroptera (virologie), Coronavirus (), Coronavirus (génétique), Coronavirus (isolement et purification), Coronavirus (pathogénicité), Humains, Infections à coronavirus (médecine vétérinaire), Infections à coronavirus (virologie), Interactions hôte-pathogène, Maladies transmissibles émergentes (virologie), Modèles biologiques, Phylogénie, RT-PCR, Syndrome respiratoire aigu sévère (virologie), Séquence nucléotidique, Thaïlande, Virulence (génétique), Virus du SRAS (), Virus du SRAS (génétique), Virus du SRAS (isolement et purification), Virus du SRAS (pathogénicité), Évolution moléculaire.
- MESH :
- génétique : ARN viral, Coronavirus, Virulence, Virus du SRAS.
- isolement et purification : Coronavirus, Virus du SRAS.
- médecine vétérinaire : Infections à coronavirus.
- pathogénicité : Coronavirus, Virus du SRAS.
- virologie : Chiroptera, Infections à coronavirus, Maladies transmissibles émergentes, Syndrome respiratoire aigu sévère.
- Animaux, Asie du Sud-Est, Coronavirus, Humains, Interactions hôte-pathogène, Modèles biologiques, Phylogénie, RT-PCR, Séquence nucléotidique, Thaïlande, Virus du SRAS, Évolution moléculaire.
- Wicri :
- geographic : Thaïlande.
English descriptors
- KwdEn :
- Animals, Asia, Southeastern, Base Sequence, Chiroptera (virology), Communicable Diseases, Emerging (virology), Coronavirus (classification), Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus (pathogenicity), Coronavirus Infections (veterinary), Coronavirus Infections (virology), Evolution, Molecular, Host-Pathogen Interactions, Humans, Models, Biological, Phylogeny, RNA, Viral (genetics), Reverse Transcriptase Polymerase Chain Reaction, SARS Virus (classification), SARS Virus (genetics), SARS Virus (isolation & purification), SARS Virus (pathogenicity), Severe Acute Respiratory Syndrome (virology), Thailand, Virulence (genetics).
- MESH :
- chemical , genetics : RNA, Viral.
- geographic : Asia, Southeastern, Thailand.
- classification : Coronavirus, SARS Virus.
- genetics : Coronavirus, SARS Virus, Virulence.
- isolation & purification : Coronavirus, SARS Virus.
- pathogenicity : Coronavirus, SARS Virus.
- veterinary : Coronavirus Infections.
- virology : Chiroptera, Communicable Diseases, Emerging, Coronavirus Infections, Severe Acute Respiratory Syndrome.
- Animals, Base Sequence, Evolution, Molecular, Host-Pathogen Interactions, Humans, Models, Biological, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction.
Abstract
► Hipposideridae is underestimated in the study of coronaviruses. ► Hipposideridae harbor
Url:
DOI: 10.1016/j.meegid.2011.06.021
PubMed: 21763784
PubMed Central: 7106191
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PMC:7106191Le document en format XML
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type="eISSN">1567-7257</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Asia, Southeastern</term><term>Base Sequence</term><term>Chiroptera (virology)</term><term>Communicable Diseases, Emerging (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Coronavirus (pathogenicity)</term><term>Coronavirus Infections (veterinary)</term><term>Coronavirus Infections (virology)</term><term>Evolution, Molecular</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Models, Biological</term><term>Phylogeny</term><term>RNA, Viral (genetics)</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>SARS Virus (classification)</term><term>SARS Virus (genetics)</term><term>SARS Virus (isolation & purification)</term><term>SARS Virus (pathogenicity)</term><term>Severe Acute Respiratory Syndrome (virology)</term><term>Thailand</term><term>Virulence (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Animaux</term><term>Asie du Sud-Est</term><term>Chiroptera (virologie)</term><term>Coronavirus ()</term><term>Coronavirus (génétique)</term><term>Coronavirus (isolement et purification)</term><term>Coronavirus (pathogénicité)</term><term>Humains</term><term>Infections à coronavirus (médecine vétérinaire)</term><term>Infections à coronavirus (virologie)</term><term>Interactions hôte-pathogène</term><term>Maladies transmissibles émergentes (virologie)</term><term>Modèles biologiques</term><term>Phylogénie</term><term>RT-PCR</term><term>Syndrome respiratoire aigu sévère (virologie)</term><term>Séquence nucléotidique</term><term>Thaïlande</term><term>Virulence (génétique)</term><term>Virus du SRAS ()</term><term>Virus du SRAS (génétique)</term><term>Virus du SRAS (isolement et purification)</term><term>Virus du SRAS (pathogénicité)</term><term>Évolution moléculaire</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Asia, Southeastern</term><term>Thailand</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term><term>Virulence</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Coronavirus</term><term>Virulence</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>Coronavirus</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term><term>Infections à coronavirus</term><term>Maladies transmissibles émergentes</term><term>Syndrome respiratoire aigu sévère</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term><term>Communicable Diseases, Emerging</term><term>Coronavirus Infections</term><term>Severe Acute Respiratory Syndrome</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Base Sequence</term><term>Evolution, Molecular</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Models, Biological</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Asie du Sud-Est</term><term>Coronavirus</term><term>Humains</term><term>Interactions hôte-pathogène</term><term>Modèles biologiques</term><term>Phylogénie</term><term>RT-PCR</term><term>Séquence nucléotidique</term><term>Thaïlande</term><term>Virus du SRAS</term><term>Évolution moléculaire</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Thaïlande</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Highlights</title><p>► Hipposideridae is underestimated in the study of coronaviruses. ► Hipposideridae harbor <italic>Alphacoronavirus</italic> and <italic>Betacoronavirus</italic> in South-East Asia. ► Hipposideridae colony can host <italic>Betacoronavirus</italic> close to SARS-CoV over long period. ► BetaCoV (SARS) spill-over chain: Hipposideridae, Rhinolophidae, Carnivora, Human. ► Hipposideridae and Rhinolophidae coevolved with independent <italic>Betacoronavirus</italic> lineages.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Armstrong, K N" uniqKey="Armstrong K">K.N. 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Gowtage-Sequeria</name></author></analytic></biblStruct></listBibl></div1></back></TEI><double pmid="21763784"><pmc><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en"><italic>SARS-Coronavirus</italic> ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory</title><author><name sortKey="Gouilh, Meriadeg Ar" sort="Gouilh, Meriadeg Ar" uniqKey="Gouilh M" first="Meriadeg Ar" last="Gouilh">Meriadeg Ar Gouilh</name><affiliation wicri:level="3"><nlm:aff id="aff1">Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris</wicri:regionArea><placeName><region type="region" nuts="2">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4">Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom, Thailand</nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom</wicri:regionArea><wicri:noRegion>Nakhon Pathom</wicri:noRegion></affiliation></author><author><name sortKey="Puechmaille, Sebastien J" sort="Puechmaille, Sebastien J" uniqKey="Puechmaille S" first="Sébastien J." last="Puechmaille">Sébastien J. Puechmaille</name><affiliation wicri:level="4"><nlm:aff id="aff2">School of Biological and Environmental Sciences, University College Dublin, Dublin, Ireland</nlm:aff><country xml:lang="fr">Irlande (pays)</country><wicri:regionArea>School of Biological and Environmental Sciences, University College Dublin, Dublin</wicri:regionArea><orgName type="university">University College Dublin</orgName><placeName><settlement type="city">Dublin</settlement><region type="région" nuts="2">Leinster</region></placeName></affiliation></author><author><name sortKey="Gonzalez, Jean Paul" sort="Gonzalez, Jean Paul" uniqKey="Gonzalez J" first="Jean-Paul" last="Gonzalez">Jean-Paul Gonzalez</name><affiliation wicri:level="1"><nlm:aff id="aff3">Centre International de Recherches Médicales de Franceville, Gabon</nlm:aff><country xml:lang="fr">Gabon</country><wicri:regionArea>Centre International de Recherches Médicales de Franceville</wicri:regionArea></affiliation></author><author><name sortKey="Teeling, Emma" sort="Teeling, Emma" uniqKey="Teeling E" first="Emma" last="Teeling">Emma Teeling</name><affiliation wicri:level="4"><nlm:aff id="aff2">School of Biological and Environmental Sciences, University College Dublin, Dublin, Ireland</nlm:aff><country xml:lang="fr">Irlande (pays)</country><wicri:regionArea>School of Biological and Environmental Sciences, University College Dublin, Dublin</wicri:regionArea><orgName type="university">University College Dublin</orgName><placeName><settlement type="city">Dublin</settlement><region type="région" nuts="2">Leinster</region></placeName></affiliation></author><author><name sortKey="Kittayapong, Pattamaporn" sort="Kittayapong, Pattamaporn" uniqKey="Kittayapong P" first="Pattamaporn" last="Kittayapong">Pattamaporn Kittayapong</name><affiliation wicri:level="1"><nlm:aff id="aff4">Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom, Thailand</nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom</wicri:regionArea><wicri:noRegion>Nakhon Pathom</wicri:noRegion></affiliation></author><author><name sortKey="Manuguerra, Jean Claude" sort="Manuguerra, Jean Claude" uniqKey="Manuguerra J" first="Jean-Claude" last="Manuguerra">Jean-Claude Manuguerra</name><affiliation wicri:level="3"><nlm:aff id="aff1">Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris</wicri:regionArea><placeName><region type="region" nuts="2">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">21763784</idno><idno type="pmc">7106191</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7106191</idno><idno type="RBID">PMC:7106191</idno><idno type="doi">10.1016/j.meegid.2011.06.021</idno><date when="2011">2011</date><idno type="wicri:Area/Pmc/Corpus">001058</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001058</idno><idno type="wicri:Area/Pmc/Curation">001058</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001058</idno><idno type="wicri:Area/Pmc/Checkpoint">000B69</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000B69</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main"><italic>SARS-Coronavirus</italic> ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory</title><author><name sortKey="Gouilh, Meriadeg Ar" sort="Gouilh, Meriadeg Ar" uniqKey="Gouilh M" first="Meriadeg Ar" last="Gouilh">Meriadeg Ar Gouilh</name><affiliation wicri:level="3"><nlm:aff id="aff1">Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris</wicri:regionArea><placeName><region type="region" nuts="2">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4">Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom, Thailand</nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom</wicri:regionArea><wicri:noRegion>Nakhon Pathom</wicri:noRegion></affiliation></author><author><name sortKey="Puechmaille, Sebastien J" sort="Puechmaille, Sebastien J" uniqKey="Puechmaille S" first="Sébastien J." last="Puechmaille">Sébastien J. Puechmaille</name><affiliation wicri:level="4"><nlm:aff id="aff2">School of Biological and Environmental Sciences, University College Dublin, Dublin, Ireland</nlm:aff><country xml:lang="fr">Irlande (pays)</country><wicri:regionArea>School of Biological and Environmental Sciences, University College Dublin, Dublin</wicri:regionArea><orgName type="university">University College Dublin</orgName><placeName><settlement type="city">Dublin</settlement><region type="région" nuts="2">Leinster</region></placeName></affiliation></author><author><name sortKey="Gonzalez, Jean Paul" sort="Gonzalez, Jean Paul" uniqKey="Gonzalez J" first="Jean-Paul" last="Gonzalez">Jean-Paul Gonzalez</name><affiliation wicri:level="1"><nlm:aff id="aff3">Centre International de Recherches Médicales de Franceville, Gabon</nlm:aff><country xml:lang="fr">Gabon</country><wicri:regionArea>Centre International de Recherches Médicales de Franceville</wicri:regionArea></affiliation></author><author><name sortKey="Teeling, Emma" sort="Teeling, Emma" uniqKey="Teeling E" first="Emma" last="Teeling">Emma Teeling</name><affiliation wicri:level="4"><nlm:aff id="aff2">School of Biological and Environmental Sciences, University College Dublin, Dublin, Ireland</nlm:aff><country xml:lang="fr">Irlande (pays)</country><wicri:regionArea>School of Biological and Environmental Sciences, University College Dublin, Dublin</wicri:regionArea><orgName type="university">University College Dublin</orgName><placeName><settlement type="city">Dublin</settlement><region type="région" nuts="2">Leinster</region></placeName></affiliation></author><author><name sortKey="Kittayapong, Pattamaporn" sort="Kittayapong, Pattamaporn" uniqKey="Kittayapong P" first="Pattamaporn" last="Kittayapong">Pattamaporn Kittayapong</name><affiliation wicri:level="1"><nlm:aff id="aff4">Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom, Thailand</nlm:aff><country xml:lang="fr">Thaïlande</country><wicri:regionArea>Center of Excellence for Vectors and Vector-Borne Diseases, Mahidol University at Salaya, Nakhon Pathom</wicri:regionArea><wicri:noRegion>Nakhon Pathom</wicri:noRegion></affiliation></author><author><name sortKey="Manuguerra, Jean Claude" sort="Manuguerra, Jean Claude" uniqKey="Manuguerra J" first="Jean-Claude" last="Manuguerra">Jean-Claude Manuguerra</name><affiliation wicri:level="3"><nlm:aff id="aff1">Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, 75724 Paris</wicri:regionArea><placeName><region type="region" nuts="2">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author></analytic><series><title level="j">Infection, Genetics and Evolution</title><idno type="ISSN">1567-1348</idno><idno type="eISSN">1567-7257</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Highlights</title><p>► Hipposideridae is underestimated in the study of coronaviruses. ► Hipposideridae harbor <italic>Alphacoronavirus</italic> and <italic>Betacoronavirus</italic> in South-East Asia. ► Hipposideridae colony can host <italic>Betacoronavirus</italic> close to SARS-CoV over long period. ► BetaCoV (SARS) spill-over chain: Hipposideridae, Rhinolophidae, Carnivora, Human. ► Hipposideridae and Rhinolophidae coevolved with independent <italic>Betacoronavirus</italic> lineages.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Armstrong, K N" uniqKey="Armstrong K">K.N. 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Gowtage-Sequeria</name></author></analytic></biblStruct></listBibl></div1></back></TEI></pmc><pubmed><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">SARS-Coronavirus ancestor's foot-prints in South-East Asian bat colonies and the refuge theory.</title><author><name sortKey="Gouilh, Meriadeg Ar" sort="Gouilh, Meriadeg Ar" uniqKey="Gouilh M" first="Meriadeg Ar" last="Gouilh">Meriadeg Ar Gouilh</name><affiliation wicri:level="3"><nlm:affiliation>Institut Pasteur, CIBU, Department Infection and Epidemiology, Paris, France. merry@pasteur.fr</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author><author><name sortKey="Puechmaille, Sebastien J" sort="Puechmaille, Sebastien J" uniqKey="Puechmaille S" first="Sébastien J" last="Puechmaille">Sébastien J. Puechmaille</name></author><author><name sortKey="Gonzalez, Jean Paul" sort="Gonzalez, Jean Paul" uniqKey="Gonzalez J" first="Jean-Paul" last="Gonzalez">Jean-Paul Gonzalez</name></author><author><name sortKey="Teeling, Emma" sort="Teeling, Emma" uniqKey="Teeling E" first="Emma" last="Teeling">Emma Teeling</name></author><author><name sortKey="Kittayapong, Pattamaporn" sort="Kittayapong, Pattamaporn" uniqKey="Kittayapong P" first="Pattamaporn" last="Kittayapong">Pattamaporn Kittayapong</name></author><author><name sortKey="Manuguerra, Jean Claude" sort="Manuguerra, Jean Claude" uniqKey="Manuguerra J" first="Jean-Claude" last="Manuguerra">Jean-Claude Manuguerra</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2011">2011</date><idno type="RBID">pubmed:21763784</idno><idno type="pmid">21763784</idno><idno type="doi">10.1016/j.meegid.2011.06.021</idno><idno type="wicri:Area/PubMed/Corpus">001495</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001495</idno><idno type="wicri:Area/PubMed/Curation">001495</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001495</idno><idno type="wicri:Area/PubMed/Checkpoint">001431</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001431</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">SARS-Coronavirus ancestor's foot-prints in South-East Asian bat colonies and the refuge theory.</title><author><name sortKey="Gouilh, Meriadeg Ar" sort="Gouilh, Meriadeg Ar" uniqKey="Gouilh M" first="Meriadeg Ar" last="Gouilh">Meriadeg Ar Gouilh</name><affiliation wicri:level="3"><nlm:affiliation>Institut Pasteur, CIBU, Department Infection and Epidemiology, Paris, France. merry@pasteur.fr</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Institut Pasteur, CIBU, Department Infection and Epidemiology, Paris</wicri:regionArea><placeName><region type="region">Île-de-France</region><region type="old region">Île-de-France</region><settlement type="city">Paris</settlement></placeName></affiliation></author><author><name sortKey="Puechmaille, Sebastien J" sort="Puechmaille, Sebastien J" uniqKey="Puechmaille S" first="Sébastien J" last="Puechmaille">Sébastien J. Puechmaille</name></author><author><name sortKey="Gonzalez, Jean Paul" sort="Gonzalez, Jean Paul" uniqKey="Gonzalez J" first="Jean-Paul" last="Gonzalez">Jean-Paul Gonzalez</name></author><author><name sortKey="Teeling, Emma" sort="Teeling, Emma" uniqKey="Teeling E" first="Emma" last="Teeling">Emma Teeling</name></author><author><name sortKey="Kittayapong, Pattamaporn" sort="Kittayapong, Pattamaporn" uniqKey="Kittayapong P" first="Pattamaporn" last="Kittayapong">Pattamaporn Kittayapong</name></author><author><name sortKey="Manuguerra, Jean Claude" sort="Manuguerra, Jean Claude" uniqKey="Manuguerra J" first="Jean-Claude" last="Manuguerra">Jean-Claude Manuguerra</name></author></analytic><series><title level="j">Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases</title><idno type="eISSN">1567-7257</idno><imprint><date when="2011" type="published">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Asia, Southeastern</term><term>Base Sequence</term><term>Chiroptera (virology)</term><term>Communicable Diseases, Emerging (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Coronavirus (pathogenicity)</term><term>Coronavirus Infections (veterinary)</term><term>Coronavirus Infections (virology)</term><term>Evolution, Molecular</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Models, Biological</term><term>Phylogeny</term><term>RNA, Viral (genetics)</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>SARS Virus (classification)</term><term>SARS Virus (genetics)</term><term>SARS Virus (isolation & purification)</term><term>SARS Virus (pathogenicity)</term><term>Severe Acute Respiratory Syndrome (virology)</term><term>Thailand</term><term>Virulence (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Animaux</term><term>Asie du Sud-Est</term><term>Chiroptera (virologie)</term><term>Coronavirus ()</term><term>Coronavirus (génétique)</term><term>Coronavirus (isolement et purification)</term><term>Coronavirus (pathogénicité)</term><term>Humains</term><term>Infections à coronavirus (médecine vétérinaire)</term><term>Infections à coronavirus (virologie)</term><term>Interactions hôte-pathogène</term><term>Maladies transmissibles émergentes (virologie)</term><term>Modèles biologiques</term><term>Phylogénie</term><term>RT-PCR</term><term>Syndrome respiratoire aigu sévère (virologie)</term><term>Séquence nucléotidique</term><term>Thaïlande</term><term>Virulence (génétique)</term><term>Virus du SRAS ()</term><term>Virus du SRAS (génétique)</term><term>Virus du SRAS (isolement et purification)</term><term>Virus du SRAS (pathogénicité)</term><term>Évolution moléculaire</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Asia, Southeastern</term><term>Thailand</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term><term>Virulence</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Coronavirus</term><term>Virulence</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Coronavirus</term><term>SARS Virus</term></keywords><keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>Coronavirus</term><term>Virus du SRAS</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term><term>Infections à coronavirus</term><term>Maladies transmissibles émergentes</term><term>Syndrome respiratoire aigu sévère</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term><term>Communicable Diseases, Emerging</term><term>Coronavirus Infections</term><term>Severe Acute Respiratory Syndrome</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Base Sequence</term><term>Evolution, Molecular</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Models, Biological</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Asie du Sud-Est</term><term>Coronavirus</term><term>Humains</term><term>Interactions hôte-pathogène</term><term>Modèles biologiques</term><term>Phylogénie</term><term>RT-PCR</term><term>Séquence nucléotidique</term><term>Thaïlande</term><term>Virus du SRAS</term><term>Évolution moléculaire</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Thaïlande</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">One of the great challenges in the ecology of infectious diseases is to understand what drives the emergence of new pathogens including the relationship between viruses and their hosts. In the case of the emergence of SevereAcute Respiratory Syndrome Coronavirus (SARS-CoV), several studies have shown coronavirus diversity in bats as well as the existence of SARS-CoV infection in apparently healthy bats, suggesting that bats may be a crucial host in the genesis of this disease. To elucidate the biogeographic origin of SARS-CoV and investigate the role that bats played in its emergence, we amplified coronavirus sequences from bat species captured throughout Thailand and assessed the phylogenetic relationships to each other and to other published coronavirus sequences. To this end, RdRp sequence of Coronavirinae was targeted by RT-PCR in non-invasive samples from bats collected in Thailand. Two new coronaviruses were detected in two bat species: one Betacoronavirus in Hipposideros larvatus and one Alphacoronavirus in Hipposiderosarmiger. Interestingly, these viruses from South-East Asia are related to those previously detected in Africa (Betacoronavirus-b) or in Europe (Alphacoronavirus & Betacoronavirus-b). These findings illuminate the origin and the evolutionary history of the SARS-CoV group found in bats by pushing forward the hypothesis of a Betacoronavirus spill-over from Hipposideridae to Rhinolophidae and then from Rhinolophidae to civets and Human. All reported Betacoronaviruses-b (SARS-CoV group) of Hipposideridae and Rhinolophidae respectively cluster in two groups despite their broad geographic distribution and the sympatry of their hosts, which is in favor of an ancient and genetically independent evolution of Betacoronavirus-b clusters in these families. Moreover, despite its probable pathogenicity, we found that a Betacoronavirus-b can persistently infect a medium-sized hipposiderid bat colony. These findings illustrate the importance of the host phylogeny and the host/pathogen ecological interactions in the description and the understanding of pathogen emergence. The host's phylogeny, biogeography and behaviour, combined with already described roles of pathogen plasticity and anthropic changes are likely to be co-factors of disease emergence. Elucidating the common ancestor of Hipposideridae and Rhinolophidae is key to understanding the evolutionary history of actual betacoronaviruses and therefore to get an insight of the deep origin of SARS-CoV.</div></front></TEI></pubmed></double></record>Pour manipuler ce document sous Unix (Dilib)
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