Phylogenetic and Molecular Analysis of an H7N7 Avian Influenza Virus Isolated in East Dongting Lake in 2012.
Identifieur interne : 000B20 ( Main/Merge ); précédent : 000B19; suivant : 000B21Phylogenetic and Molecular Analysis of an H7N7 Avian Influenza Virus Isolated in East Dongting Lake in 2012.
Auteurs : Yi Yao [République populaire de Chine] ; Cui Ling Xu [République populaire de Chine] ; Jing Hong Shi [République populaire de Chine] ; Yun Zhu [République populaire de Chine] ; Yun Fei Li [République populaire de Chine] ; Tian Bai [République populaire de Chine] ; Fang Cai Li [République populaire de Chine] ; Tao Cai [République populaire de Chine] ; Fan Yuan [République populaire de Chine] ; Tao Chen [République populaire de Chine] ; Hao Yang [République populaire de Chine] ; Wen Chao Li [République populaire de Chine] ; Heng Jiao Zhang [République populaire de Chine] ; Hong Zhang [République populaire de Chine] ; Yue Long Shu [République populaire de Chine]Source :
- Biomedical and environmental sciences : BES [ 0895-3988 ] ; 2015.
Descripteurs français
- KwdFr :
- ARN viral (génétique), Animaux, Chine, Données de séquences moléculaires, Embryon non mammalien (virologie), Fèces (virologie), Grippe chez les oiseaux (virologie), Génome viral, Lacs (virologie), Maladies de la volaille (virologie), Oies (virologie), Phylogénie, Réaction de polymérisation en chaine en temps réel (médecine vétérinaire), Sous-type H7N7 du virus de la grippe A (génétique), Sous-type H7N7 du virus de la grippe A (isolement et purification), Séquence d'acides aminés.
- MESH :
- génétique : ARN viral, Sous-type H7N7 du virus de la grippe A.
- isolement et purification : Sous-type H7N7 du virus de la grippe A.
- médecine vétérinaire : Réaction de polymérisation en chaine en temps réel.
- virologie : Embryon non mammalien, Fèces, Grippe chez les oiseaux, Lacs, Maladies de la volaille, Oies.
- Animaux, Chine, Données de séquences moléculaires, Génome viral, Phylogénie, Séquence d'acides aminés.
- Wicri :
- geographic : République populaire de Chine.
English descriptors
- KwdEn :
- Amino Acid Sequence, Animals, China, Embryo, Nonmammalian (virology), Feces (virology), Geese (virology), Genome, Viral, Influenza A Virus, H7N7 Subtype (genetics), Influenza A Virus, H7N7 Subtype (isolation & purification), Influenza in Birds (virology), Lakes (virology), Molecular Sequence Data, Phylogeny, Poultry Diseases (virology), RNA, Viral (genetics), Real-Time Polymerase Chain Reaction (veterinary).
- MESH :
- chemical , genetics : RNA, Viral.
- geographic : China.
- genetics : Influenza A Virus, H7N7 Subtype.
- isolation & purification : Influenza A Virus, H7N7 Subtype.
- veterinary : Real-Time Polymerase Chain Reaction.
- virology : Embryo, Nonmammalian, Feces, Geese, Influenza in Birds, Lakes, Poultry Diseases.
- Amino Acid Sequence, Animals, Genome, Viral, Molecular Sequence Data, Phylogeny.
Abstract
In March 2012, an H7N7 subtype avian influenza virus (AIV) named A/wild goose/Dongting/PC0360/2012 (H7N7) (DT/PC0360) was recovered from a wild goose in East Dongting Lake. We performed whole-genome sequencing of the isolate, and analyzed the phylogenetic and molecular characterization.
DOI: 10.3967/bes2015.074
PubMed: 26248736
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pubmed:26248736Le document en format XML
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Li</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Cai, Tao" sort="Cai, Tao" uniqKey="Cai T" first="Tao" last="Cai">Tao Cai</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Yuan, Fan" sort="Yuan, Fan" uniqKey="Yuan F" first="Fan" last="Yuan">Fan Yuan</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Nutrition and Health, Chinese Center for Disease Control and Prevention, Beijing 100050, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Nutrition and Health, Chinese Center for Disease Control and Prevention, Beijing 100050</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Chen, Tao" sort="Chen, Tao" uniqKey="Chen T" first="Tao" last="Chen">Tao Chen</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Yang, Hao" sort="Yang, Hao" uniqKey="Yang H" first="Hao" last="Yang">Hao Yang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Li, Wen Chao" sort="Li, Wen Chao" uniqKey="Li W" first="Wen Chao" last="Li">Wen Chao Li</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Heng Jiao" sort="Zhang, Heng Jiao" uniqKey="Zhang H" first="Heng Jiao" last="Zhang">Heng Jiao Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Hong" sort="Zhang, Hong" uniqKey="Zhang H" first="Hong" last="Zhang">Hong Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Shu, Yue Long" sort="Shu, Yue Long" uniqKey="Shu Y" first="Yue Long" last="Shu">Yue Long Shu</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:26248736</idno><idno type="pmid">26248736</idno><idno 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uniqKey="Yao Y" first="Yi" last="Yao">Yi Yao</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Cui Ling" sort="Xu, Cui Ling" uniqKey="Xu C" first="Cui Ling" last="Xu">Cui Ling Xu</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Shi, Jing Hong" sort="Shi, Jing Hong" uniqKey="Shi J" first="Jing Hong" last="Shi">Jing Hong Shi</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Zhu, Yun" sort="Zhu, Yun" uniqKey="Zhu Y" first="Yun" last="Zhu">Yun Zhu</name><affiliation wicri:level="1"><nlm:affiliation>Beijing Pediatric Research Institute, Beijing Children's Hospital, Capital Medical University, Beijing 100045, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Beijing Pediatric Research Institute, Beijing Children's Hospital, Capital Medical University, Beijing 100045</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Li, Yun Fei" sort="Li, Yun Fei" uniqKey="Li Y" first="Yun Fei" last="Li">Yun Fei Li</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Bai, Tian" sort="Bai, Tian" uniqKey="Bai T" first="Tian" last="Bai">Tian Bai</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Li, Fang Cai" sort="Li, Fang Cai" uniqKey="Li F" first="Fang Cai" last="Li">Fang Cai Li</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Cai, Tao" sort="Cai, Tao" uniqKey="Cai T" first="Tao" last="Cai">Tao Cai</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Yuan, Fan" sort="Yuan, Fan" uniqKey="Yuan F" first="Fan" last="Yuan">Fan Yuan</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Nutrition and Health, Chinese Center for Disease Control and Prevention, Beijing 100050, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Nutrition and Health, Chinese Center for Disease Control and Prevention, Beijing 100050</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Chen, Tao" sort="Chen, Tao" uniqKey="Chen T" first="Tao" last="Chen">Tao Chen</name><affiliation wicri:level="1"><nlm:affiliation>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan East Dongting Lake National Nature Reserve, Yueyang 414018, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Yang, Hao" sort="Yang, Hao" uniqKey="Yang H" first="Hao" last="Yang">Hao Yang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Li, Wen Chao" sort="Li, Wen Chao" uniqKey="Li W" first="Wen Chao" last="Li">Wen Chao Li</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Heng Jiao" sort="Zhang, Heng Jiao" uniqKey="Zhang H" first="Heng Jiao" last="Zhang">Heng Jiao Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Hong" sort="Zhang, Hong" uniqKey="Zhang H" first="Hong" last="Zhang">Hong Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Hunan Provincial Center for Disease Control and Prevention, Changsha 410005, Hunan</wicri:regionArea><wicri:noRegion>Hunan</wicri:noRegion></affiliation></author><author><name sortKey="Shu, Yue Long" sort="Shu, Yue Long" uniqKey="Shu Y" first="Yue Long" last="Shu">Yue Long Shu</name><affiliation wicri:level="1"><nlm:affiliation>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Institute for Viral Disease Control and Prevention, China CDC, Key Laboratory for Medical Virology, National Health and Family Planning Commission, Beijing 102206</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author></analytic><series><title level="j">Biomedical and environmental sciences : BES</title><idno type="ISSN">0895-3988</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term><term>Animals</term><term>China</term><term>Embryo, Nonmammalian (virology)</term><term>Feces (virology)</term><term>Geese (virology)</term><term>Genome, Viral</term><term>Influenza A Virus, H7N7 Subtype (genetics)</term><term>Influenza A Virus, H7N7 Subtype (isolation & purification)</term><term>Influenza in Birds (virology)</term><term>Lakes (virology)</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Poultry Diseases (virology)</term><term>RNA, Viral (genetics)</term><term>Real-Time Polymerase Chain Reaction (veterinary)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Animaux</term><term>Chine</term><term>Données de séquences moléculaires</term><term>Embryon non mammalien (virologie)</term><term>Fèces (virologie)</term><term>Grippe chez les oiseaux (virologie)</term><term>Génome viral</term><term>Lacs (virologie)</term><term>Maladies de la volaille (virologie)</term><term>Oies (virologie)</term><term>Phylogénie</term><term>Réaction de polymérisation en chaine en temps réel (médecine vétérinaire)</term><term>Sous-type H7N7 du virus de la grippe A (génétique)</term><term>Sous-type H7N7 du virus de la grippe A (isolement et purification)</term><term>Séquence d'acides aminés</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>China</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Influenza A Virus, H7N7 Subtype</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Sous-type H7N7 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A Virus, H7N7 Subtype</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Sous-type H7N7 du virus de la grippe A</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Réaction de polymérisation en chaine en temps réel</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Real-Time Polymerase Chain Reaction</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Embryon non mammalien</term><term>Fèces</term><term>Grippe chez les oiseaux</term><term>Lacs</term><term>Maladies de la volaille</term><term>Oies</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Embryo, Nonmammalian</term><term>Feces</term><term>Geese</term><term>Influenza in Birds</term><term>Lakes</term><term>Poultry Diseases</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Animals</term><term>Genome, Viral</term><term>Molecular Sequence Data</term><term>Phylogeny</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Chine</term><term>Données de séquences moléculaires</term><term>Génome viral</term><term>Phylogénie</term><term>Séquence d'acides aminés</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>République populaire de Chine</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In March 2012, an H7N7 subtype avian influenza virus (AIV) named A/wild goose/Dongting/PC0360/2012 (H7N7) (DT/PC0360) was recovered from a wild goose in East Dongting Lake. We performed whole-genome sequencing of the isolate, and analyzed the phylogenetic and molecular characterization.</div></front></TEI></record>Pour manipuler ce document sous Unix (Dilib)
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|type= RBID
|clé= pubmed:26248736
|texte= Phylogenetic and Molecular Analysis of an H7N7 Avian Influenza Virus Isolated in East Dongting Lake in 2012.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Merge/RBID.i -Sk "pubmed:26248736" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Merge/biblio.hfd \
| NlmPubMed2Wicri -a PandemieGrippaleV1
| This area was generated with Dilib version V0.6.34. |  |