Loss of base excision repair in aging rat neurons and its restoration by DNA polymerase beta.
Identifieur interne : 002568 ( PubMed/Curation ); précédent : 002567; suivant : 002569Loss of base excision repair in aging rat neurons and its restoration by DNA polymerase beta.
Auteurs : K S Rao [Inde] ; V V Annapurna ; N S Raji ; T. HarikrishnaSource :
- Brain research. Molecular brain research [ 0169-328X ] ; 2000.
Descripteurs français
- KwdFr :
- Amorces ADN, Animaux, DNA polymerase I (métabolisme), DNA polymerase I (pharmacologie), DNA polymerase beta (génétique), DNA polymerase beta (métabolisme), Escherichia coli, Exodeoxyribonuclease V, Exodeoxyribonucleases (métabolisme), Femelle, Foie (enzymologie), Mâle, Mésappariement de bases (physiologie), Neurones (cytologie), Neurones (enzymologie), Rat Wistar, Rats, Réparation de l'ADN (physiologie), Spécificité du substrat, Thymus (glande) (enzymologie), Vieillissement (physiologie).
- MESH :
- cytologie : Neurones.
- enzymologie : Foie, Neurones, Thymus (glande).
- génétique : DNA polymerase beta.
- métabolisme : DNA polymerase I, DNA polymerase beta, Exodeoxyribonucleases.
- pharmacologie : DNA polymerase I.
- physiologie : Mésappariement de bases, Réparation de l'ADN, Vieillissement.
- Amorces ADN, Animaux, Escherichia coli, Exodeoxyribonuclease V, Femelle, Mâle, Rat Wistar, Rats, Spécificité du substrat.
English descriptors
- KwdEn :
- Aging (physiology), Animals, Base Pair Mismatch (physiology), DNA Polymerase I (metabolism), DNA Polymerase I (pharmacology), DNA Polymerase beta (genetics), DNA Polymerase beta (metabolism), DNA Primers, DNA Repair (physiology), Escherichia coli, Exodeoxyribonuclease V, Exodeoxyribonucleases (metabolism), Female, Liver (enzymology), Male, Neurons (cytology), Neurons (enzymology), Rats, Rats, Wistar, Substrate Specificity, Thymus Gland (enzymology).
- MESH :
- chemical , genetics : DNA Polymerase beta.
- chemical , metabolism : DNA Polymerase I, DNA Polymerase beta, Exodeoxyribonucleases.
- chemical , pharmacology : DNA Polymerase I.
- cytology : Neurons.
- enzymology : Liver, Neurons, Thymus Gland.
- physiology : Aging, Base Pair Mismatch, DNA Repair.
- Animals, DNA Primers, Escherichia coli, Exodeoxyribonuclease V, Female, Male, Rats, Rats, Wistar, Substrate Specificity.
Abstract
Synthetic staggered oligodeoxynucleotide duplexes are formed by annealing a 5'-32P-labeled 14-mer with four different 21-mers. These duplexes have either a correct or mismatched base pair at 3'-end of the primer. With these model template primers the ability of neuronal extracts, obtained from rats of different ages, to extend the primer to the predicted length was tested. While the neuronal extracts of all ages were able to degrade the 14-mer to shorter lengths, extension of the primers in general and in particular, the mismatched, is achieved only feebly by the young and adult neuronal extracts and undetectable with old neuronal extracts. The possibility of restoring the lost activity by supplementing the neuronal extracts with pure DNA polymerases was examined. Of the three polymerases tested (calf thymus alpha polymerase, E. coli DNA polymerase I and rat liver DNA polymerase beta) only polymerase beta gave consistent and encouraging results although the extension was slow and distributive in nature and mismatched primers were extended much less efficiently than the correctly paired primer. However, significantly improved extension, including those of mismatched primers, was achieved by prior removal of mismatched bases in a preincubation with just the neuronal extracts (3'-5'exonuclease activity) followed by extension by the added polymerase beta and dNTPs in the presence of Mn(2+) instead of the usual Mg(2+). These results are taken to indicate that the activity of polymerase beta in brain cells is compromised with age and that this deficit can be corrected in vitro by the addition of pure recombinant rat liver polymerase beta under appropriate conditions.
DOI: 10.1016/s0169-328x(00)00266-7
PubMed: 11146128
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These duplexes have either a correct or mismatched base pair at 3'-end of the primer. With these model template primers the ability of neuronal extracts, obtained from rats of different ages, to extend the primer to the predicted length was tested. While the neuronal extracts of all ages were able to degrade the 14-mer to shorter lengths, extension of the primers in general and in particular, the mismatched, is achieved only feebly by the young and adult neuronal extracts and undetectable with old neuronal extracts. The possibility of restoring the lost activity by supplementing the neuronal extracts with pure DNA polymerases was examined. Of the three polymerases tested (calf thymus alpha polymerase, E. coli DNA polymerase I and rat liver DNA polymerase beta) only polymerase beta gave consistent and encouraging results although the extension was slow and distributive in nature and mismatched primers were extended much less efficiently than the correctly paired primer. However, significantly improved extension, including those of mismatched primers, was achieved by prior removal of mismatched bases in a preincubation with just the neuronal extracts (3'-5'exonuclease activity) followed by extension by the added polymerase beta and dNTPs in the presence of Mn(2+) instead of the usual Mg(2+). These results are taken to indicate that the activity of polymerase beta in brain cells is compromised with age and that this deficit can be corrected in vitro by the addition of pure recombinant rat liver polymerase beta under appropriate conditions.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">11146128</PMID><DateCompleted><Year>2001</Year><Month>03</Month><Day>08</Day></DateCompleted><DateRevised><Year>2019</Year><Month>08</Month><Day>26</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0169-328X</ISSN><JournalIssue CitedMedium="Print"><Volume>85</Volume><Issue>1-2</Issue><PubDate><Year>2000</Year><Month>Dec</Month><Day>28</Day></PubDate></JournalIssue><Title>Brain research. Molecular brain research</Title><ISOAbbreviation>Brain Res. Mol. Brain Res.</ISOAbbreviation></Journal><ArticleTitle>Loss of base excision repair in aging rat neurons and its restoration by DNA polymerase beta.</ArticleTitle><Pagination><MedlinePgn>251-9</MedlinePgn></Pagination><Abstract><AbstractText>Synthetic staggered oligodeoxynucleotide duplexes are formed by annealing a 5'-32P-labeled 14-mer with four different 21-mers. These duplexes have either a correct or mismatched base pair at 3'-end of the primer. With these model template primers the ability of neuronal extracts, obtained from rats of different ages, to extend the primer to the predicted length was tested. While the neuronal extracts of all ages were able to degrade the 14-mer to shorter lengths, extension of the primers in general and in particular, the mismatched, is achieved only feebly by the young and adult neuronal extracts and undetectable with old neuronal extracts. The possibility of restoring the lost activity by supplementing the neuronal extracts with pure DNA polymerases was examined. Of the three polymerases tested (calf thymus alpha polymerase, E. coli DNA polymerase I and rat liver DNA polymerase beta) only polymerase beta gave consistent and encouraging results although the extension was slow and distributive in nature and mismatched primers were extended much less efficiently than the correctly paired primer. However, significantly improved extension, including those of mismatched primers, was achieved by prior removal of mismatched bases in a preincubation with just the neuronal extracts (3'-5'exonuclease activity) followed by extension by the added polymerase beta and dNTPs in the presence of Mn(2+) instead of the usual Mg(2+). These results are taken to indicate that the activity of polymerase beta in brain cells is compromised with age and that this deficit can be corrected in vitro by the addition of pure recombinant rat liver polymerase beta under appropriate conditions.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Rao</LastName><ForeName>K S</ForeName><Initials>KS</Initials><AffiliationInfo><Affiliation>Department of Biochemistry, School of Life Sciences, University of Hyderabad, Hyderabad-500046, India. ksrs1@uohyd.ernet.in</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Annapurna</LastName><ForeName>V V</ForeName><Initials>VV</Initials></Author><Author ValidYN="Y"><LastName>Raji</LastName><ForeName>N S</ForeName><Initials>NS</Initials></Author><Author ValidYN="Y"><LastName>Harikrishna</LastName><ForeName>T</ForeName><Initials>T</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Brain Res Mol Brain Res</MedlineTA><NlmUniqueID>8908640</NlmUniqueID><ISSNLinking>0169-328X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.7.7.-</RegistryNumber><NameOfSubstance UI="D004256">DNA Polymerase I</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.7.7.-</RegistryNumber><NameOfSubstance UI="D019951">DNA Polymerase beta</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 3.1.-</RegistryNumber><NameOfSubstance UI="D005090">Exodeoxyribonucleases</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 3.1.11.5</RegistryNumber><NameOfSubstance UI="D043211">Exodeoxyribonuclease V</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000375" MajorTopicYN="N">Aging</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020137" MajorTopicYN="N">Base Pair Mismatch</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004256" MajorTopicYN="N">DNA Polymerase I</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019951" MajorTopicYN="N">DNA Polymerase beta</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017931" MajorTopicYN="N">DNA Primers</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004260" MajorTopicYN="N">DNA Repair</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004926" MajorTopicYN="N">Escherichia coli</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D043211" MajorTopicYN="N">Exodeoxyribonuclease V</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005090" MajorTopicYN="N">Exodeoxyribonucleases</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005260" MajorTopicYN="N">Female</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008099" MajorTopicYN="N">Liver</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="N">enzymology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008297" MajorTopicYN="N">Male</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009474" MajorTopicYN="N">Neurons</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D051381" MajorTopicYN="N">Rats</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017208" MajorTopicYN="N">Rats, Wistar</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013379" MajorTopicYN="N">Substrate Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013950" MajorTopicYN="N">Thymus Gland</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="N">enzymology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2001</Year><Month>1</Month><Day>9</Day><Hour>11</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2001</Year><Month>3</Month><Day>10</Day><Hour>10</Hour><Minute>1</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2001</Year><Month>1</Month><Day>9</Day><Hour>11</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">11146128</ArticleId><ArticleId IdType="pii">S0169328X00002667</ArticleId><ArticleId IdType="doi">10.1016/s0169-328x(00)00266-7</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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