Serveur d'exploration MERS

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Two deletion variants of Middle East respiratory syndrome coronavirus found in a patient with characteristic symptoms.

Identifieur interne : 000A76 ( PubMed/Checkpoint ); précédent : 000A75; suivant : 000A77

Two deletion variants of Middle East respiratory syndrome coronavirus found in a patient with characteristic symptoms.

Auteurs : Qian Xie [République populaire de Chine] ; Yujuan Cao [République populaire de Chine] ; Juan Su [République populaire de Chine] ; Jie Wu [République populaire de Chine] ; Xianbo Wu [République populaire de Chine] ; Chengsong Wan [République populaire de Chine] ; Mingliang He [République populaire de Chine] ; Changwen Ke [République populaire de Chine] ; Bao Zhang [République populaire de Chine] ; Wei Zhao [République populaire de Chine]

Source :

RBID : pubmed:28421366

Descripteurs français

English descriptors

Abstract

Significant sequence variation of Middle East respiratory syndrome coronavirus (MERS CoV) has never been detected since it was first reported in 2012. A MERS patient came from Korea to China in late May 2015. The patient was 44 years old and had symptoms including high fever, dry cough with a little phlegm, and shortness of breath, which are roughly consistent with those associated with MERS, and had had close contact with individuals with confirmed cases of MERS.After one month of therapy with antiviral, anti-infection, and immune-enhancing agents, the patient recovered in the hospital and was discharged. A nasopharyngeal swab sample was collected for direct sequencing, which revealed two deletion variants of MERS CoV. Deletions of 414 and 419 nt occurred between ORF5 and the E protein, resulting in a partial protein fusion or truncation of ORF5 and the E protein. Functional analysis by bioinformatics and comparison to previous studies implied that the two variants might be defective in their ability to package MERS CoV. However, the mechanism of how these deletions occurred and what effects they have need to be further investigated.

DOI: 10.1007/s00705-017-3361-x
PubMed: 28421366


Affiliations:


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pubmed:28421366

Le document en format XML

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<div type="abstract" xml:lang="en">Significant sequence variation of Middle East respiratory syndrome coronavirus (MERS CoV) has never been detected since it was first reported in 2012. A MERS patient came from Korea to China in late May 2015. The patient was 44 years old and had symptoms including high fever, dry cough with a little phlegm, and shortness of breath, which are roughly consistent with those associated with MERS, and had had close contact with individuals with confirmed cases of MERS.After one month of therapy with antiviral, anti-infection, and immune-enhancing agents, the patient recovered in the hospital and was discharged. A nasopharyngeal swab sample was collected for direct sequencing, which revealed two deletion variants of MERS CoV. Deletions of 414 and 419 nt occurred between ORF5 and the E protein, resulting in a partial protein fusion or truncation of ORF5 and the E protein. Functional analysis by bioinformatics and comparison to previous studies implied that the two variants might be defective in their ability to package MERS CoV. However, the mechanism of how these deletions occurred and what effects they have need to be further investigated.</div>
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<AbstractText>Significant sequence variation of Middle East respiratory syndrome coronavirus (MERS CoV) has never been detected since it was first reported in 2012. A MERS patient came from Korea to China in late May 2015. The patient was 44 years old and had symptoms including high fever, dry cough with a little phlegm, and shortness of breath, which are roughly consistent with those associated with MERS, and had had close contact with individuals with confirmed cases of MERS.After one month of therapy with antiviral, anti-infection, and immune-enhancing agents, the patient recovered in the hospital and was discharged. A nasopharyngeal swab sample was collected for direct sequencing, which revealed two deletion variants of MERS CoV. Deletions of 414 and 419 nt occurred between ORF5 and the E protein, resulting in a partial protein fusion or truncation of ORF5 and the E protein. Functional analysis by bioinformatics and comparison to previous studies implied that the two variants might be defective in their ability to package MERS CoV. However, the mechanism of how these deletions occurred and what effects they have need to be further investigated.</AbstractText>
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<ForeName>Xianbo</ForeName>
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