Serveur d'exploration MERS

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Quantifying spatiotemporal heterogeneity of MERS-CoV transmission in the Middle East region: A combined modelling approach

Identifieur interne : 001612 ( Main/Merge ); précédent : 001611; suivant : 001613

Quantifying spatiotemporal heterogeneity of MERS-CoV transmission in the Middle East region: A combined modelling approach

Auteurs : Chiara Poletto [France] ; Vittoria Colizza [France, Italie] ; Pierre-Yves Boëlle [France]

Source :

RBID : PMC:7104927

Descripteurs français

English descriptors

Abstract

Highlights

We modelled MERS epidemic in the Middle East region up to September 2014.

We assessed spatiotemporal variation in zoonotic and human transmission.

Spring 2014 wave showed a 17-fold and 3-fold increase in the above transmissions.

Zoonotic transmission has a larger spatial heterogeneity than human transmission.

Human transmission is more frequent than expected (75% of cases vs. 34%).


Url:
DOI: 10.1016/j.epidem.2015.12.001
PubMed: 27266844
PubMed Central: 7104927

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PMC:7104927

Le document en format XML

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<p id="par0005">We modelled MERS epidemic in the Middle East region up to September 2014.</p>
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<p id="par0010">We assessed spatiotemporal variation in zoonotic and human transmission.</p>
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<p id="par0015">Spring 2014 wave showed a 17-fold and 3-fold increase in the above transmissions.</p>
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<p id="par0020">Zoonotic transmission has a larger spatial heterogeneity than human transmission.</p>
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<p>MERS coronavirus cases notified in the Middle East region since the identification of the virus in 2012 have displayed variations in time and across geography. Through a combined modelling approach, we estimate the rates of generation of cases along the zoonotic and human-to-human transmission routes and assess their spatiotemporal heterogeneity. We consider all cases notified to WHO from March 2012 to mid-September 2014. We use a stochastic modelling of the time series of case incidence in the Middle East region to estimate time- and space-dependent zoonotic and human-to-human transmission parameters. The model also accounts for possible lack of identification of secondary transmissions among notified cases. This approach is combined with the analysis of imported cases out of the region to assess the rate of underreporting of cases. Out of a total of 32 possible models, based on different parameterization and scenario considered, the best-fit model is characterized by a large heterogeneity in time and across space for both zoonotic and human-to-human transmission. The variation in time that occurred during Spring 2014 led to a 17-fold and 3-fold increase in the two transmissions, respectively, bringing the reproductive rate to values above 1 during that period for all regions under study. The model suggests that 75% of MERS-CoV cases are secondary cases (human-to-human transmission), which is substantially higher than the 34% of reported cases with an epidemiological link to another case. Overall, estimated reporting rate is 0.26. Our findings show a higher level of spatial heterogeneity in zoonotic transmission compared to human-to-human, highlighting the strong environmental component of the epidemic. Since sporadic introductions are predicted to be a small proportion of notified cases and are responsible for triggering secondary transmissions, a more comprehensive understanding of zoonotic source and path of transmission could be critical to limit the epidemic spread.</p>
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<country xml:lang="fr">France</country>
<wicri:regionArea>Sorbonne Universités, UPMC Univ Paris 06, INSERM, Institut Pierre Louis d’épidémiologie et de Santé Publique (IPLESP UMRS 1136), F75012, 27 rue Chaligny, Paris 75012</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Île-de-France</region>
</placeName>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="aff0010">Institute for Scientific Interchange Foundation, via Alassio 11/c, Torino 10126, Italy</nlm:aff>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Institute for Scientific Interchange Foundation, via Alassio 11/c, Torino 10126</wicri:regionArea>
<placeName>
<settlement type="city">Turin</settlement>
<region type="région" nuts="2">Piémont</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Boelle, Pierre Yves" sort="Boelle, Pierre Yves" uniqKey="Boelle P" first="Pierre-Yves" last="Boëlle">Pierre-Yves Boëlle</name>
<affiliation wicri:level="3">
<nlm:aff id="aff0005">Sorbonne Universités, UPMC Univ Paris 06, INSERM, Institut Pierre Louis d’épidémiologie et de Santé Publique (IPLESP UMRS 1136), F75012, 27 rue Chaligny, Paris 75012, France</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea>Sorbonne Universités, UPMC Univ Paris 06, INSERM, Institut Pierre Louis d’épidémiologie et de Santé Publique (IPLESP UMRS 1136), F75012, 27 rue Chaligny, Paris 75012</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Île-de-France</region>
</placeName>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Epidemics</title>
<idno type="ISSN">1755-4365</idno>
<idno type="eISSN">1878-0067</idno>
<imprint>
<date when="2015">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Coronavirus Infections (epidemiology)</term>
<term>Coronavirus Infections (transmission)</term>
<term>Epidemics</term>
<term>Humans</term>
<term>Incidence</term>
<term>Middle East (epidemiology)</term>
<term>Middle East Respiratory Syndrome Coronavirus</term>
<term>Spatio-Temporal Analysis</term>
<term>Stochastic Processes</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Analyse spatio-temporelle</term>
<term>Coronavirus du syndrome respiratoire du Moyen-Orient</term>
<term>Humains</term>
<term>Incidence</term>
<term>Infections à coronavirus (transmission)</term>
<term>Infections à coronavirus (épidémiologie)</term>
<term>Moyen Orient (épidémiologie)</term>
<term>Processus stochastiques</term>
<term>Épidémies</term>
</keywords>
<keywords scheme="MESH" qualifier="epidemiology" xml:lang="en">
<term>Coronavirus Infections</term>
<term>Middle East</term>
</keywords>
<keywords scheme="MESH" qualifier="transmission" xml:lang="en">
<term>Coronavirus Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr">
<term>Infections à coronavirus</term>
<term>Moyen Orient</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Epidemics</term>
<term>Humans</term>
<term>Incidence</term>
<term>Middle East Respiratory Syndrome Coronavirus</term>
<term>Spatio-Temporal Analysis</term>
<term>Stochastic Processes</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Analyse spatio-temporelle</term>
<term>Coronavirus du syndrome respiratoire du Moyen-Orient</term>
<term>Humains</term>
<term>Incidence</term>
<term>Processus stochastiques</term>
<term>Épidémies</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>Highlights</title>
<p>
<list list-type="simple" id="lis0005">
<list-item id="lsti0005">
<label></label>
<p id="par0005">We modelled MERS epidemic in the Middle East region up to September 2014.</p>
</list-item>
<list-item id="lsti0010">
<label></label>
<p id="par0010">We assessed spatiotemporal variation in zoonotic and human transmission.</p>
</list-item>
<list-item id="lsti0015">
<label></label>
<p id="par0015">Spring 2014 wave showed a 17-fold and 3-fold increase in the above transmissions.</p>
</list-item>
<list-item id="lsti0020">
<label></label>
<p id="par0020">Zoonotic transmission has a larger spatial heterogeneity than human transmission.</p>
</list-item>
<list-item id="lsti0025">
<label></label>
<p id="par0025">Human transmission is more frequent than expected (75% of cases vs. 34%).</p>
</list-item>
</list>
</p>
</div>
</front>
<back>
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