1365-3156 < 1367-4803 < 1367-4811

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List of bibliographic references indexed by 1367-4803

Number of relevant bibliographic references: 46.
[0-20] [0 - 20][0 - 46][20-40]

Ident.	Authors (with country if any)	Title
000500 (2019)	Guillaume Marçais [États-Unis] ; Dan Deblasio [États-Unis] ; Prashant Pandey [États-Unis] ; Carl Kingsford [États-Unis]	Locality-sensitive hashing for the edit distance
000A57 (2018)	Guillaume Marçais [États-Unis] ; Dan Deblasio [États-Unis] ; Carl Kingsford [États-Unis]	Asymptotically optimal minimizers schemes
000A98 (2018)	Dilip A. Durai [Allemagne] ; Marcel H. Schulz [Allemagne]	In silico read normalization using set multi-cover optimization
000B09 (2017)	Hamid Mohamadi [Canada] ; Hamza Khan [Canada] ; Inanc Birol [Canada]	ntCard: a streaming algorithm for cardinality estimation in genomics data
000D39 (2017)	Guillaume Marçais [États-Unis] ; David Pellow [Israël] ; Daniel Bork [États-Unis] ; Yaron Orenstein [États-Unis] ; Ron Shamir [Israël] ; Carl Kingsford [États-Unis]	Improving the performance of minimizers and winnowing schemes
000D84 (2017)	Roye Rozov [Israël] ; Gil Goldshlager [États-Unis] ; Eran Halperin [États-Unis] ; Ron Shamir [Israël]	Faucet: streaming de novo assembly graph construction
000E61 (2017)	Xu Min [République populaire de Chine] ; Wanwen Zeng [République populaire de Chine] ; Ning Chen [République populaire de Chine] ; Ting Chen [République populaire de Chine, États-Unis] ; Rui Jiang [République populaire de Chine]	Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding
000F38 (2016)	Hamid Mohamadi ; Justin Chu ; Benjamin P. Vandervalk ; Inanc Birol	ntHash: recursive nucleotide hashing
001187 (2016)	Daniel Mapleson [Royaume-Uni] ; Gonzalo Garcia Accinelli [Royaume-Uni] ; George Kettleborough [Royaume-Uni] ; Jonathan Wright [Royaume-Uni] ; Bernardo J. Clavijo [Royaume-Uni]	KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
001389 (2016)	Leena Salmela [Finlande] ; Riku Walve [Finlande] ; Eric Rivals [France] ; Esko Ukkonen [Finlande]	Accurate self-correction of errors in long reads using de Bruijn graphs
001518 (2015)	Yuzhen Ye ; Haixu Tang	Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysis
001721 (2015)	Kévin Vervier ; Pierre Mahé ; Maud Tournoud ; Jean-Baptiste Veyrieras ; Jean-Philippe Vert	Large-scale machine learning for metagenomics sequence classification
001837 (2015)	Yaron Orenstein ; Ron Shamir	Design of shortest double-stranded DNA sequences covering all k-mers with applications to protein-binding microarrays and synthetic enhancers
001B11 (2014)	Zhaojun Zhang [États-Unis] ; Wei Wang [États-Unis]	RNA-Skim: a rapid method for RNA-Seq quantification at transcript level
001C08 (2014)	Peter Audano ; Fredrik Vannberg	KAnalyze: a fast versatile pipelined K-mer toolkit
001C58 (2014)	Sohan Seth [Finlande] ; Niko V Lim Ki [Finlande] ; Samuel Kaski [Finlande] ; Antti Honkela [Finlande]	Exploration and retrieval of whole-metagenome sequencing samples
002019 (2013)	Yaron Orenstein ; Ron Shamir	Design of shortest double-stranded DNA sequences covering all k-mers with applications to protein-binding microarrays and synthetic enhancers
002208 (2012)	Roy Ronen ; Christina Boucher [États-Unis] ; Hamidreza Chitsaz [États-Unis] ; Pavel Pevzner [États-Unis]	SEQuel: improving the accuracy of genome assemblies
002215 (2012)	Robert A. Edwards [États-Unis] ; Robert Olson [États-Unis] ; Terry Disz [États-Unis] ; Gordon D. Pusch [États-Unis] ; Veronika Vonstein [États-Unis] ; Rick Stevens [États-Unis] ; Ross Overbeek [États-Unis]	Real Time Metagenomics: Using k-mers to annotate metagenomes
002233 (2012)	Yi Wang ; Henry C. M. Leung ; S. M. Yiu ; Francis Y. L. Chin	MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample
002608 (2010)	Kana Shimizu ; Koji Tsuda [Japon]	SlideSort: all pairs similarity search for short reads

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