Short RNAs in Tomato
Identifieur interne : 002686 ( Main/Exploration ); précédent : 002685; suivant : 002687Short RNAs in Tomato
Auteurs : Tamas Dalmay [Royaume-Uni]Source :
- Journal of Integrative Plant Biology [ 1672-9072 ] ; 2010-04.
English descriptors
- Teeft :
- Arabidopsis, Bartel, Biological function, Candidate mirnas, Complementary strand, Corresponding author, Dalmay, Deep sequencing, Different tissues, Differential expression, Eshy fruit development, Ethylene response, Fruit development, Full genome sequence, Future directions, Genome, Higher level, Integrative plant biology, Leaf formation, Leaf margins, Micrornas, Mirna, Mirna activity, Mirna genes, Mirnas, Mrna, Mrna targets, Negative regulator, Other hand, Other species, Ower buds, Plant cell, Plant mirnas, Putative mirna, Rna, Sequencing, Several target genes, Short rnas, Sirnas, Srnas, Tapir loci, Target gene, Target genes, Target mrnas, Tomato, Tomato fruit, Tomato mirnas, Tomato srnas, Tomato tissues, Transcription factor family, Transcriptional gene, Translational level, Transposable elements, Young fruits, Young mirnas.
Abstract
Short RNAs are 20–24 nucleotide long non‐coding RNA molecules generated by one of the Dicer‐like enzymes. They recognize specific RNA or DNA sequences and guide the RNA silencing complex to their targets leading to post‐transcriptional or transcriptional gene silencing of the target. Most of our knowledge about short RNAs comes from studying the model species Arabidopsis. Recently, however, several reports emerged about short RNAs in tomato, which is a model plant for fleshy fruit development and ripening. Tomato short RNAs have been sequenced and a database was established. Novel non‐conserved microRNAs were found that showed differential expression between fruit and other tissues, even during fruit development, suggesting that they may play a role in fruit formation. Several target genes were predicted and validated for both conserved and non‐conserved miRNAs and some of these targets are key players in fruit ripening, such as Colourless non‐ripening. The present study reviews the current state of tomato short RNAs research and suggests future directions.
Url:
DOI: 10.1111/j.1744-7909.2009.00871.x
Affiliations:
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They recognize specific RNA or DNA sequences and guide the RNA silencing complex to their targets leading to post‐transcriptional or transcriptional gene silencing of the target. Most of our knowledge about short RNAs comes from studying the model species Arabidopsis. Recently, however, several reports emerged about short RNAs in tomato, which is a model plant for fleshy fruit development and ripening. Tomato short RNAs have been sequenced and a database was established. Novel non‐conserved microRNAs were found that showed differential expression between fruit and other tissues, even during fruit development, suggesting that they may play a role in fruit formation. Several target genes were predicted and validated for both conserved and non‐conserved miRNAs and some of these targets are key players in fruit ripening, such as Colourless non‐ripening. The present study reviews the current state of tomato short RNAs research and suggests future directions.</div></front></TEI><affiliations><list><country><li>Royaume-Uni</li></country></list><tree><country name="Royaume-Uni"><noRegion><name sortKey="Dalmay, Tamas" sort="Dalmay, Tamas" uniqKey="Dalmay T" first="Tamas" last="Dalmay">Tamas Dalmay</name></noRegion><name sortKey="Dalmay, Tamas" sort="Dalmay, Tamas" uniqKey="Dalmay T" first="Tamas" last="Dalmay">Tamas Dalmay</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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