Molecular epidemiology and characterization of human coronavirus in Thailand, 2012–2013
Identifieur interne : 001104 ( Main/Exploration ); précédent : 001103; suivant : 001105Molecular epidemiology and characterization of human coronavirus in Thailand, 2012–2013
Auteurs : Rapeepun Soonnarong [Thaïlande] ; Ilada Thongpan [Thaïlande] ; Sunchai Payungporn [Thaïlande] ; Chanpim Vuthitanachot [Thaïlande] ; Viboonsuk Vuthitanachot [Thaïlande] ; Preeyaporn Vichiwattana [Thaïlande] ; Sompong Vongpunsawad [Thaïlande] ; Yong Poovorawan [Thaïlande]Source :
- SpringerPlus [ 2193-1801 ] ; 2016.
Abstract
Coronavirus causes respiratory infections in humans. To determine the prevalence of human coronavirus (HCoV) infection among patients with influenza-like illness, 5833 clinical samples from nasopharyngeal swabs and aspirates collected between January 2012 and December 2013 were examined.
HCoV was found in 46 (0.79 %) samples. There were 19 (0.32 %) HCoV-HKU1, 19 (0.32 %) HCoV-NL63, 5 (0.09 %) HCoV-229E, and 3 (0.05 %) HCoV-OC43. None of the sample tested positive for MERS-CoV. The majority (54 %) of the HCoV-positive patients were between the ages of 0 and 5 years. HCoV was detected throughout the 2-year period and generally peaked from May to October, which coincided with the rainy season. Phylogenetic trees based on the alignment of the spike (
The data in this study provide an insight into the prevalence of the recent circulating HCoVs in the region.
Url:
DOI: 10.1186/s40064-016-3101-9
PubMed: 27625974
PubMed Central: 4999384
Affiliations:
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Le document en format XML
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<author><name sortKey="Poovorawan, Yong" sort="Poovorawan, Yong" uniqKey="Poovorawan Y" first="Yong" last="Poovorawan">Yong Poovorawan</name>
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<front><div type="abstract" xml:lang="en"><sec><title>Background</title>
<p id="Par1">Coronavirus causes respiratory infections in humans. To determine the prevalence of human coronavirus (HCoV) infection among patients with influenza-like illness, 5833 clinical samples from nasopharyngeal swabs and aspirates collected between January 2012 and December 2013 were examined.</p>
</sec>
<sec><title>Results</title>
<p id="Par2">HCoV was found in 46 (0.79 %) samples. There were 19 (0.32 %) HCoV-HKU1, 19 (0.32 %) HCoV-NL63, 5 (0.09 %) HCoV-229E, and 3 (0.05 %) HCoV-OC43. None of the sample tested positive for MERS-CoV. The majority (54 %) of the HCoV-positive patients were between the ages of 0 and 5 years. HCoV was detected throughout the 2-year period and generally peaked from May to October, which coincided with the rainy season. Phylogenetic trees based on the alignment of the spike (<italic>S</italic>
) gene sequences suggest an emergence of a new clade for HCoV-229E.</p>
</sec>
<sec><title>Conclusions</title>
<p id="Par3">The data in this study provide an insight into the prevalence of the recent circulating HCoVs in the region.</p>
</sec>
</div>
</front>
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EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Main/Exploration
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Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001104 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= MersV1 |flux= Main |étape= Exploration |type= RBID |clé= PMC:4999384 |texte= Molecular epidemiology and characterization of human coronavirus in Thailand, 2012–2013 }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:27625974" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a MersV1
This area was generated with Dilib version V0.6.33. |