MersV1, Main, Exploration, bibRecord, 000134

NextPolish: a fast and efficient genome polishing tool for long-read assembly.

Identifieur interne : 000134 ( Main/Exploration ); précédent : 000133; suivant : 000135

NextPolish: a fast and efficient genome polishing tool for long-read assembly.

Auteurs : Jiang Hu [République populaire de Chine] ; Junpeng Fan [République populaire de Chine] ; Zongyi Sun [République populaire de Chine] ; Shanlin Liu [République populaire de Chine]

Source :

Bioinformatics (Oxford, England) [ 1367-4811 ] ; 2020.

RBID : pubmed:31778144

Abstract

Although long-read sequencing technologies can produce genomes with long contiguity, they suffer from high error rates. Thus, we developed NextPolish, a tool that efficiently corrects sequence errors in genomes assembled with long reads. This new tool consists of two interlinked modules that are designed to score and count K-mers from high quality short reads, and to polish genome assemblies containing large numbers of base errors.

DOI: 10.1093/bioinformatics/btz891
PubMed: 31778144

Affiliations:

République populaire de Chine

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Serveur d'exploration MERS

NextPolish: a fast and efficient genome polishing tool for long-read assembly.

NextPolish: a fast and efficient genome polishing tool for long-read assembly.

Source :

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki

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