scpA , a new salicylate hydroxylase gene localized in salicylate/caprolactam degradation plasmids
Identifieur interne : 000229 ( Istex/Checkpoint ); précédent : 000228; suivant : 000230scpA , a new salicylate hydroxylase gene localized in salicylate/caprolactam degradation plasmids
Auteurs : A. V. Panov [Russie] ; O. V. Volkova [Russie] ; I. F. Puntus [Russie] ; T. Z. Esikova [Russie] ; I. A. Kosheleva [Russie] ; A. M. Boronin [Russie]Source :
- Molecular Biology [ 0026-8933 ] ; 2013-01-01.
English descriptors
Abstract
Abstract: Both caprolactams and salicylate biodegradation by Pseudomonas salicylate/caprolactam degraders are controlled by large conjugative plasmids (SAL/CAP). Some of these plasmids have been assigned to the P-7 incompatibility group. The new salicylate 1-hydroxylase gene (scpA) has been detected in SAL/CAP plasmids and partially sequenced. The scpA gene was equally related to the closest homolog genes nahG (NAH7), salA (P. reinekei MT1), and nahU (pND6-1); however, the identity rate did not exceed 72–74%. The synthesis of salicylate 1-hydroxylase ScpA was not induced by salicylate. This enzyme had wide substrate specificity and exhibited the highest specific activity toward 4-methylsalicylate and nonsubstituted salicylate substrates. Furthermore, conjugative pseudomonads’ plasmids of salicylate degradation without the classical nah2 operon, which harbors only salicylate 1-hydroxylase gene nahU have been described for the first time.
Url:
DOI: 10.1134/S0026893313010147
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
ISTEX:E231555660B45BF3E940BABD7C18E771EA67268ALe document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title xml:lang="en">scpA , a new salicylate hydroxylase gene localized in salicylate/caprolactam degradation plasmids</title>
<author><name sortKey="Panov, A V" sort="Panov, A V" uniqKey="Panov A" first="A. V." last="Panov">A. V. Panov</name>
</author>
<author><name sortKey="Volkova, O V" sort="Volkova, O V" uniqKey="Volkova O" first="O. V." last="Volkova">O. V. Volkova</name>
</author>
<author><name sortKey="Puntus, I F" sort="Puntus, I F" uniqKey="Puntus I" first="I. F." last="Puntus">I. F. Puntus</name>
</author>
<author><name sortKey="Esikova, T Z" sort="Esikova, T Z" uniqKey="Esikova T" first="T. Z." last="Esikova">T. Z. Esikova</name>
</author>
<author><name sortKey="Kosheleva, I A" sort="Kosheleva, I A" uniqKey="Kosheleva I" first="I. A." last="Kosheleva">I. A. Kosheleva</name>
</author>
<author><name sortKey="Boronin, A M" sort="Boronin, A M" uniqKey="Boronin A" first="A. M." last="Boronin">A. M. Boronin</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:E231555660B45BF3E940BABD7C18E771EA67268A</idno>
<date when="2013" year="2013">2013</date>
<idno type="doi">10.1134/S0026893313010147</idno>
<idno type="url">https://api.istex.fr/ark:/67375/VQC-B2N6BP0F-G/fulltext.pdf</idno>
<idno type="wicri:Area/Istex/Corpus">001112</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">001112</idno>
<idno type="wicri:Area/Istex/Curation">001112</idno>
<idno type="wicri:Area/Istex/Checkpoint">000229</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">000229</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title level="a" type="main" xml:lang="en">scpA , a new salicylate hydroxylase gene localized in salicylate/caprolactam degradation plasmids</title>
<author><name sortKey="Panov, A V" sort="Panov, A V" uniqKey="Panov A" first="A. V." last="Panov">A. V. Panov</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><country wicri:rule="url">Russie</country>
</affiliation>
</author>
<author><name sortKey="Volkova, O V" sort="Volkova, O V" uniqKey="Volkova O" first="O. V." last="Volkova">O. V. Volkova</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Puntus, I F" sort="Puntus, I F" uniqKey="Puntus I" first="I. F." last="Puntus">I. F. Puntus</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Esikova, T Z" sort="Esikova, T Z" uniqKey="Esikova T" first="T. Z." last="Esikova">T. Z. Esikova</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kosheleva, I A" sort="Kosheleva, I A" uniqKey="Kosheleva I" first="I. A." last="Kosheleva">I. A. Kosheleva</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Pushchino State Educational Institute of Natural Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Boronin, A M" sort="Boronin, A M" uniqKey="Boronin A" first="A. M." last="Boronin">A. M. Boronin</name>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><country xml:lang="fr">Russie</country>
<wicri:regionArea>Pushchino State Educational Institute of Natural Sciences, 142290, Pushchino</wicri:regionArea>
<wicri:noRegion>Pushchino</wicri:noRegion>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series><title level="j">Molecular Biology</title>
<title level="j" type="abbrev">Mol Biol</title>
<idno type="ISSN">0026-8933</idno>
<idno type="eISSN">1608-3245</idno>
<imprint><publisher>SP MAIK Nauka/Interperiodica</publisher>
<pubPlace>Dordrecht</pubPlace>
<date type="published" when="2013-01-01">2013-01-01</date>
<biblScope unit="volume">47</biblScope>
<biblScope unit="issue">1</biblScope>
<biblScope unit="page" from="105">105</biblScope>
<biblScope unit="page" to="111">111</biblScope>
</imprint>
<idno type="ISSN">0026-8933</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><idno type="ISSN">0026-8933</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Pseudomonas</term>
<term>and scpA gene</term>
<term>caprolactam</term>
<term>nahU gene</term>
<term>plasmid</term>
<term>salicylate 1-hydroxylase</term>
</keywords>
</textClass>
<langUsage><language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Abstract: Both caprolactams and salicylate biodegradation by Pseudomonas salicylate/caprolactam degraders are controlled by large conjugative plasmids (SAL/CAP). Some of these plasmids have been assigned to the P-7 incompatibility group. The new salicylate 1-hydroxylase gene (scpA) has been detected in SAL/CAP plasmids and partially sequenced. The scpA gene was equally related to the closest homolog genes nahG (NAH7), salA (P. reinekei MT1), and nahU (pND6-1); however, the identity rate did not exceed 72–74%. The synthesis of salicylate 1-hydroxylase ScpA was not induced by salicylate. This enzyme had wide substrate specificity and exhibited the highest specific activity toward 4-methylsalicylate and nonsubstituted salicylate substrates. Furthermore, conjugative pseudomonads’ plasmids of salicylate degradation without the classical nah2 operon, which harbors only salicylate 1-hydroxylase gene nahU have been described for the first time.</div>
</front>
</TEI>
<affiliations><list><country><li>Russie</li>
</country>
</list>
<tree><country name="Russie"><noRegion><name sortKey="Panov, A V" sort="Panov, A V" uniqKey="Panov A" first="A. V." last="Panov">A. V. Panov</name>
</noRegion>
<name sortKey="Boronin, A M" sort="Boronin, A M" uniqKey="Boronin A" first="A. M." last="Boronin">A. M. Boronin</name>
<name sortKey="Boronin, A M" sort="Boronin, A M" uniqKey="Boronin A" first="A. M." last="Boronin">A. M. Boronin</name>
<name sortKey="Esikova, T Z" sort="Esikova, T Z" uniqKey="Esikova T" first="T. Z." last="Esikova">T. Z. Esikova</name>
<name sortKey="Kosheleva, I A" sort="Kosheleva, I A" uniqKey="Kosheleva I" first="I. A." last="Kosheleva">I. A. Kosheleva</name>
<name sortKey="Kosheleva, I A" sort="Kosheleva, I A" uniqKey="Kosheleva I" first="I. A." last="Kosheleva">I. A. Kosheleva</name>
<name sortKey="Panov, A V" sort="Panov, A V" uniqKey="Panov A" first="A. V." last="Panov">A. V. Panov</name>
<name sortKey="Puntus, I F" sort="Puntus, I F" uniqKey="Puntus I" first="I. F." last="Puntus">I. F. Puntus</name>
<name sortKey="Volkova, O V" sort="Volkova, O V" uniqKey="Volkova O" first="O. V." last="Volkova">O. V. Volkova</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/MersV1/Data/Istex/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000229 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Istex/Checkpoint/biblio.hfd -nk 000229 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= MersV1 |flux= Istex |étape= Checkpoint |type= RBID |clé= ISTEX:E231555660B45BF3E940BABD7C18E771EA67268A |texte= scpA , a new salicylate hydroxylase gene localized in salicylate/caprolactam degradation plasmids }}
This area was generated with Dilib version V0.6.33. |