H2N2V1, PubMed, Curation, bibRecord, 000087

Adaptation of pandemic H2N2 influenza A viruses in humans.

Identifieur interne : 000087 ( PubMed/Curation ); précédent : 000086; suivant : 000088

Adaptation of pandemic H2N2 influenza A viruses in humans.

Auteurs : Udayan Joseph [Singapour] ; Martin Linster [Pays-Bas] ; Yuka Suzuki [Singapour] ; Scott Krauss [États-Unis] ; Rebecca A. Halpin [États-Unis] ; Dhanasekaran Vijaykrishna [Singapour] ; Thomas P. Fabrizio [États-Unis] ; Theo M. Bestebroer [Pays-Bas] ; Sebastian Maurer-Stroh [Singapour] ; Richard J. Webby [États-Unis] ; David E. Wentworth [États-Unis] ; Ron A M. Fouchier [Pays-Bas] ; Justin Bahl [États-Unis] ; Gavin J D. Smith [États-Unis]

Source :

Journal of virology [ 1098-5514 ] ; 2015.

RBID : pubmed:25505070

Descripteurs français

KwdFr :
- ARN viral (génétique), Adaptation biologique, Analyse de séquence d'ADN, Animaux, Données de séquences moléculaires, Flambées de maladies, Grippe chez les oiseaux (virologie), Grippe chez les oiseaux (épidémiologie), Grippe humaine (virologie), Grippe humaine (épidémiologie), Humains, Oiseaux, Sous-type H2N2 du virus de la grippe A (génétique), Variation génétique, Zoonoses (virologie), Zoonoses (épidémiologie), Évolution moléculaire.
MESH :
- génétique : ARN viral, Sous-type H2N2 du virus de la grippe A.
- virologie : Grippe chez les oiseaux, Grippe humaine, Zoonoses.
- épidémiologie : Grippe chez les oiseaux, Grippe humaine, Zoonoses.
- Adaptation biologique, Analyse de séquence d'ADN, Animaux, Données de séquences moléculaires, Flambées de maladies, Humains, Oiseaux, Variation génétique, Évolution moléculaire.

English descriptors

KwdEn :
- Adaptation, Biological, Animals, Birds, Disease Outbreaks, Evolution, Molecular, Genetic Variation, Humans, Influenza A Virus, H2N2 Subtype (genetics), Influenza in Birds (epidemiology), Influenza in Birds (virology), Influenza, Human (epidemiology), Influenza, Human (virology), Molecular Sequence Data, RNA, Viral (genetics), Sequence Analysis, DNA, Zoonoses (epidemiology), Zoonoses (virology).
MESH :
- chemical , genetics : RNA, Viral.
- epidemiology : Influenza in Birds, Influenza, Human, Zoonoses.
- genetics : Influenza A Virus, H2N2 Subtype.
- virology : Influenza in Birds, Influenza, Human, Zoonoses.
- Adaptation, Biological, Animals, Birds, Disease Outbreaks, Evolution, Molecular, Genetic Variation, Humans, Molecular Sequence Data, Sequence Analysis, DNA.

Abstract

The 1957 A/H2N2 influenza virus caused an estimated 2 million fatalities during the pandemic. Since viruses of the H2 subtype continue to infect avian species and pigs, the threat of reintroduction into humans remains. To determine factors involved in the zoonotic origin of the 1957 pandemic, we performed analyses on genetic sequences of 175 newly sequenced human and avian H2N2 virus isolates and all publicly available influenza virus genomes.

DOI: 10.1128/JVI.02590-14
PubMed: 25505070

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<front><div type="abstract" xml:lang="en">The 1957 A/H2N2 influenza virus caused an estimated 2 million fatalities during the pandemic. Since viruses of the H2 subtype continue to infect avian species and pigs, the threat of reintroduction into humans remains. To determine factors involved in the zoonotic origin of the 1957 pandemic, we performed analyses on genetic sequences of 175 newly sequenced human and avian H2N2 virus isolates and all publicly available influenza virus genomes. </div>
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<Abstract><AbstractText>The 1957 A/H2N2 influenza virus caused an estimated 2 million fatalities during the pandemic. Since viruses of the H2 subtype continue to infect avian species and pigs, the threat of reintroduction into humans remains. To determine factors involved in the zoonotic origin of the 1957 pandemic, we performed analyses on genetic sequences of 175 newly sequenced human and avian H2N2 virus isolates and all publicly available influenza virus genomes. </AbstractText>
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<ReferenceList><Reference><Citation>Nucleic Acids Res. 2002 Jul 15;30(14):3059-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12136088</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2014 Apr 10;508(7495):254-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24531761</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2004 Jul 30;305(5684):645</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15286366</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2004 Oct 10;328(1):101-19</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15380362</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbiol Rev. 1992 Mar;56(1):152-79</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1579108</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virus Res. 1992 Mar;22(3):281-93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1626421</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 1993 Jun;194(2):781-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7684877</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1998 Sep;72(9):7626-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9696865</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2005 May;22(5):1208-22</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15703242</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2006 Jan;12(1):9-14</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16494710</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2006 Dec;80(23):11887-91</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16987977</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2007 Mar;24(3):845-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17218639</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2007 Aug;24(8):1586-91</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17483113</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2008;9:5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18179705</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2008 May 29;453(7195):615-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18418375</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Pathog. 2008 Jun;4(6):e1000079</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18535658</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2009 Aug 1;390(2):289-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19501380</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11709-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19597152</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2009 Oct;83(19):10309-13</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19605485</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Comput Biol. 2009 Nov;5(11):e1000564</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19911053</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2010 Feb;84(4):1715-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20007271</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2010;5(3):e9490</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20224823</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2004 Jul 6;101(27):10116-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15218108</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Immunol. 2000 Feb;12(1):35-43</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10679406</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2000 Sep;74(18):8502-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10954551</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2001 Oct;82(Pt 10):2475-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11562540</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2010;5(6):e11158</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20574518</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Oct 1;26(19):2455-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20671151</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Microbiol. 2011 Aug;9(8):590-603</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21747392</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Genet. 2012;8(7):e1002764</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22807683</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2012 Aug;29(8):1969-73</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22367748</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virol J. 2013;10:181</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23742765</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Pathog. 2013;9(8):e1003570</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24009503</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2014 Jan;88(2):1175-88</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24227848</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Adaptation of pandemic H2N2 influenza A viruses in humans.

Adaptation of pandemic H2N2 influenza A viruses in humans.

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