Molecular analyses of H3N2 canine influenza viruses isolated from Korea during 2013–2014
Identifieur interne : 000C58 ( Ncbi/Checkpoint ); précédent : 000C57; suivant : 000C59Molecular analyses of H3N2 canine influenza viruses isolated from Korea during 2013–2014
Auteurs : Eunjung Lee ; Eun-Ju Kim ; Bo-Hye Kim ; Jae-Young Song ; In-Soo Cho ; Yeun-Kyung ShinSource :
- Virus Genes [ 0920-8569 ] ; 2016.
Abstract
Canine influenza A virus (CIV) causes a respiratory disease among dog populations and is prevalent in North America and Asia. Recently, Asian H3N2 CIV infection has been of particular concern, with recent reports related to reassortants with pandemic 2009 strains, direct transmission from a human H3N2, a possibility of H3N2 CIV transmission to other mammals, and even the first outbreak of H3N2 CIVs in North America in April 2015. However, despite these global concerns, our understanding of how influenza A virus transmission impacts the overall populations of H3N2 CIVs remains incomplete. Hence, we investigated the evolutionary history of the most recent two Korean CIV isolates, A/canine/Korea/BD-1/2013 and A/canine/Korea/DG1/2014, along with 57 worldwide CIVs, using comprehensive molecular analyses based on genomic genotyping. This study presents that the new Korean CIV isolates are closely related to the predominantly circulating H3N2 CIVs with genotypes
The online version of this article (doi:10.1007/s11262-015-1274-x) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1007/s11262-015-1274-x
PubMed: 26810402
PubMed Central: 4792367
Affiliations:
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uniqKey="Kim B" first="Bo-Hye" last="Kim">Bo-Hye Kim</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Song, Jae Young" sort="Song, Jae Young" uniqKey="Song J" first="Jae-Young" last="Song">Jae-Young Song</name><affiliation><nlm:aff id="Aff2">Veterinary Drugs and Biologics Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggido Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Cho, In Soo" sort="Cho, In Soo" uniqKey="Cho I" first="In-Soo" last="Cho">In-Soo Cho</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Shin, Yeun Kyung" sort="Shin, Yeun Kyung" uniqKey="Shin Y" first="Yeun-Kyung" last="Shin">Yeun-Kyung Shin</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26810402</idno><idno type="pmc">4792367</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792367</idno><idno type="RBID">PMC:4792367</idno><idno type="doi">10.1007/s11262-015-1274-x</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000213</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" 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Korea</wicri:noCountry></affiliation></author><author><name sortKey="Kim, Eun Ju" sort="Kim, Eun Ju" uniqKey="Kim E" first="Eun-Ju" last="Kim">Eun-Ju Kim</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Kim, Bo Hye" sort="Kim, Bo Hye" uniqKey="Kim B" first="Bo-Hye" last="Kim">Bo-Hye Kim</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Song, Jae Young" sort="Song, Jae Young" uniqKey="Song J" first="Jae-Young" last="Song">Jae-Young Song</name><affiliation><nlm:aff id="Aff2">Veterinary Drugs and Biologics Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggido Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Cho, In Soo" sort="Cho, In Soo" uniqKey="Cho I" first="In-Soo" last="Cho">In-Soo Cho</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author><author><name sortKey="Shin, Yeun Kyung" sort="Shin, Yeun Kyung" uniqKey="Shin Y" first="Yeun-Kyung" last="Shin">Yeun-Kyung Shin</name><affiliation><nlm:aff id="Aff1">Viral Disease Division, Animal and Plant Quarantine Agency, 175 Anayngro, Anyang, Gyeonggido 430-757 Republic of Korea</nlm:aff><wicri:noCountry code="subfield">Gyeonggido 430-757 Republic of Korea</wicri:noCountry></affiliation></author></analytic><series><title level="j">Virus Genes</title><idno type="ISSN">0920-8569</idno><idno type="eISSN">1572-994X</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Canine influenza A virus (CIV) causes a respiratory disease among dog populations and is prevalent in North America and Asia. Recently, Asian H3N2 CIV infection has been of particular concern, with recent reports related to reassortants with pandemic 2009 strains, direct transmission from a human H3N2, a possibility of H3N2 CIV transmission to other mammals, and even the first outbreak of H3N2 CIVs in North America in April 2015. However, despite these global concerns, our understanding of how influenza A virus transmission impacts the overall populations of H3N2 CIVs remains incomplete. Hence, we investigated the evolutionary history of the most recent two Korean CIV isolates, A/canine/Korea/BD-1/2013 and A/canine/Korea/DG1/2014, along with 57 worldwide CIVs, using comprehensive molecular analyses based on genomic genotyping. This study presents that the new Korean CIV isolates are closely related to the predominantly circulating H3N2 CIVs with genotypes <italic>K, G, E, 3B, F, 2D, F,</italic> and <italic>1E</italic>, carrying several mutations in antigenic and host determinant sites. Also, our findings show that the genome-wide genetic variations within the H3N2 CIVs are low; however, two antigenic protein (HA and NA) analysis demonstrates genetic diversification of the H3N2 CIVs, which evolves independently between Korea and China.</p><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1007/s11262-015-1274-x) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Ozawa, M" uniqKey="Ozawa M">M Ozawa</name></author><author><name sortKey="Kawaoka, Y" uniqKey="Kawaoka Y">Y Kawaoka</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nelson, Mi" uniqKey="Nelson M">MI Nelson</name></author><author><name sortKey="Holmes, Ec" uniqKey="Holmes E">EC Holmes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Boivin, S" uniqKey="Boivin S">S 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Liu</name></author><author><name sortKey="Chen, Y" uniqKey="Chen Y">Y Chen</name></author><author><name sortKey="Zhang, H" uniqKey="Zhang H">H Zhang</name></author><author><name sortKey="Qu, L" uniqKey="Qu L">L Qu</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Xia, D" uniqKey="Xia D">D Xia</name></author><author><name sortKey="Liu, M" uniqKey="Liu M">M Liu</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list></list><tree><noCountry><name sortKey="Cho, In Soo" sort="Cho, In Soo" uniqKey="Cho I" first="In-Soo" last="Cho">In-Soo Cho</name><name sortKey="Kim, Bo Hye" sort="Kim, Bo Hye" uniqKey="Kim B" first="Bo-Hye" last="Kim">Bo-Hye Kim</name><name sortKey="Kim, Eun Ju" sort="Kim, Eun Ju" uniqKey="Kim E" first="Eun-Ju" last="Kim">Eun-Ju Kim</name><name sortKey="Lee, Eunjung" sort="Lee, Eunjung" uniqKey="Lee E" first="Eunjung" last="Lee">Eunjung Lee</name><name sortKey="Shin, Yeun Kyung" sort="Shin, Yeun Kyung" uniqKey="Shin Y" first="Yeun-Kyung" last="Shin">Yeun-Kyung Shin</name><name sortKey="Song, Jae Young" sort="Song, Jae Young" uniqKey="Song J" first="Jae-Young" last="Song">Jae-Young Song</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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