Pyrosequencing of supra- and subgingival biofilms from inflamed peri-implant and periodontal sites
Identifieur interne : 005722 ( Ncbi/Curation ); précédent : 005721; suivant : 005723Pyrosequencing of supra- and subgingival biofilms from inflamed peri-implant and periodontal sites
Auteurs : Simone Schaumann [Allemagne] ; Ingmar Staufenbiel [Allemagne] ; Ralph Scherer [Allemagne] ; Markus Schilhabel [Allemagne] ; Andreas Winkel [Allemagne] ; Sascha Nico Stumpp [Allemagne] ; Jörg Eberhard [Allemagne] ; Meike Stiesch [Allemagne]Source :
- BMC Oral Health [ 1472-6831 ] ; 2014.
Abstract
To investigate the microbial composition of biofilms at inflamed peri-implant and periodontal tissues in the same subject, using 16S rRNA sequencing.
Supra- and submucosal, and supra- and subgingival plaque samples were collected from 7 subjects suffering from diseased peri-implant and periodontal tissues. Bacterial DNA was isolated and 16S rRNA genes were amplified, sequenced and aligned for the identification of bacterial genera.
43734 chimera-depleted, denoised sequences were identified, corresponding to 1 phylum, 8 classes, 10 orders, 44 families and 150 genera. The most abundant families or genera found in supramucosal or supragingival plaque were
Diseased peri-implant and periodontal tissues in the same subject share similiar bacterial genera and based on the analysis of taxa on a genus level biofilm compositions may not account for the potentially distinct pathologies at implants or teeth.
The online version of this article (doi:10.1186/1472-6831-14-157) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/1472-6831-14-157
PubMed: 25518856
PubMed Central: 4298060
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<author><name sortKey="Stumpp, Sascha Nico" sort="Stumpp, Sascha Nico" uniqKey="Stumpp S" first="Sascha Nico" last="Stumpp">Sascha Nico Stumpp</name>
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<series><title level="j">BMC Oral Health</title>
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<front><div type="abstract" xml:lang="en"><sec><title>Background</title>
<p>To investigate the microbial composition of biofilms at inflamed peri-implant and periodontal tissues in the same subject, using 16S rRNA sequencing.</p>
</sec>
<sec><title>Methods</title>
<p>Supra- and submucosal, and supra- and subgingival plaque samples were collected from 7 subjects suffering from diseased peri-implant and periodontal tissues. Bacterial DNA was isolated and 16S rRNA genes were amplified, sequenced and aligned for the identification of bacterial genera.</p>
</sec>
<sec><title>Results</title>
<p>43734 chimera-depleted, denoised sequences were identified, corresponding to 1 phylum, 8 classes, 10 orders, 44 families and 150 genera. The most abundant families or genera found in supramucosal or supragingival plaque were <italic>Streptoccocaceae, Rothia</italic>
and <italic>Porphyromonas.</italic>
In submucosal plaque, the most abundant family or genera found were <italic>Rothia, Streptococcaceae</italic>
and <italic>Porphyromonas</italic>
on implants. The most abundant subgingival bacteria on teeth were <italic>Prevotella, Streptococcaceae,</italic>
and <italic>TG5.</italic>
The number of sequences found for the genera <italic>Tannerella</italic>
and <italic>Aggregatibacter</italic>
on implants differed significantly between supra- and submucosal locations before multiple testing. The analyses demonstrated no significant differences between microbiomes on implants and teeth in supra- or submucosal and supra- or subgingival biofilms.</p>
</sec>
<sec><title>Conclusion</title>
<p>Diseased peri-implant and periodontal tissues in the same subject share similiar bacterial genera and based on the analysis of taxa on a genus level biofilm compositions may not account for the potentially distinct pathologies at implants or teeth.</p>
</sec>
<sec><title>Electronic supplementary material</title>
<p>The online version of this article (doi:10.1186/1472-6831-14-157) contains supplementary material, which is available to authorized users.</p>
</sec>
</div>
</front>
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