Correlation between genetic HLA class I and II polymorphisms and anthropological aspects in the Chaouya population from Morocco (Arabic speaking).
Identifieur interne : 000013 ( PubMed/Corpus ); précédent : 000012; suivant : 000014Correlation between genetic HLA class I and II polymorphisms and anthropological aspects in the Chaouya population from Morocco (Arabic speaking).
Auteurs : A. Canossi ; D. Piancatelli ; A. Aureli ; K. Oumhani ; G. Ozzella ; T. Del Beato ; G. Liberatore ; R. El Aouad ; D. AdornoSource :
- Tissue antigens [ 1399-0039 ] ; 2010.
English descriptors
- KwdEn :
- Adult, African Continental Ancestry Group (genetics), Aged, Alleles, Anthropology, Physical, Female, Gene Frequency, Haplotypes (genetics), Histocompatibility Antigens Class I (genetics), Histocompatibility Antigens Class II (genetics), Humans, Male, Middle Aged, Morocco (epidemiology), Phylogeny, Polymorphism, Genetic (genetics).
- MESH :
- chemical , genetics : Histocompatibility Antigens Class I, Histocompatibility Antigens Class II.
- geographic , epidemiology : Morocco.
- genetics : African Continental Ancestry Group, Haplotypes, Polymorphism, Genetic.
- Adult, Aged, Alleles, Anthropology, Physical, Female, Gene Frequency, Humans, Male, Middle Aged, Phylogeny.
Abstract
The aim of this study was to provide genetic and anthropological information on the Chaouya (CH), an Arabic-speaking population living in West Morocco, Atlantic coast (Settat). In 98 unrelated healthy CH volunteers, we first investigated the human leukocyte antigen (HLA) class I and II allele polymorphisms using a sequence-based typing method and examined haplotypes and relatedness of this group to other African and Mediterranean populations. The study showed the close relatedness with Tunisian population and other North Africans, together with a strong influence of various immigrations, mainly Spaniards, French, and Portuguese, as expected. Nevertheless, analysis of class II allele frequencies (afs) showed that Oromo and Amhara Ethiopian groups cluster together with the Berbers and other North Africans, confirming the relationship between these populations (Afro-Asiatic linguistic group, Hamites). South and sub-Saharan Africans cluster separately at a great distance from CH, except the sub-Saharan Bantu population from Congo Kinshasa, which shows a relatively close genetic relationship ascribable to the effect of a diversifying selection. On the other hand, considering HLA class I afs analyses, it was noteworthy that CH grouped together with sub-Saharans, showing a close genetic distance mainly with Ugandas and Kenians Luo.
DOI: 10.1111/j.1399-0039.2010.01498.x
PubMed: 20492599
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pubmed:20492599Le document en format XML
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Ozzella</name></author><author><name sortKey="Del Beato, T" sort="Del Beato, T" uniqKey="Del Beato T" first="T" last="Del Beato">T. Del Beato</name></author><author><name sortKey="Liberatore, G" sort="Liberatore, G" uniqKey="Liberatore G" first="G" last="Liberatore">G. Liberatore</name></author><author><name sortKey="El Aouad, R" sort="El Aouad, R" uniqKey="El Aouad R" first="R" last="El Aouad">R. El Aouad</name></author><author><name sortKey="Adorno, D" sort="Adorno, D" uniqKey="Adorno D" first="D" last="Adorno">D. 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Canossi</name><affiliation><nlm:affiliation>CNR Institute Organ Transplants and Immunocitology, L'Aquila, Italy. angelica.canossi@cnr.it</nlm:affiliation></affiliation></author><author><name sortKey="Piancatelli, D" sort="Piancatelli, D" uniqKey="Piancatelli D" first="D" last="Piancatelli">D. Piancatelli</name></author><author><name sortKey="Aureli, A" sort="Aureli, A" uniqKey="Aureli A" first="A" last="Aureli">A. Aureli</name></author><author><name sortKey="Oumhani, K" sort="Oumhani, K" uniqKey="Oumhani K" first="K" last="Oumhani">K. Oumhani</name></author><author><name sortKey="Ozzella, G" sort="Ozzella, G" uniqKey="Ozzella G" first="G" last="Ozzella">G. Ozzella</name></author><author><name sortKey="Del Beato, T" sort="Del Beato, T" uniqKey="Del Beato T" first="T" last="Del Beato">T. Del Beato</name></author><author><name sortKey="Liberatore, G" sort="Liberatore, G" uniqKey="Liberatore G" first="G" last="Liberatore">G. Liberatore</name></author><author><name sortKey="El Aouad, R" sort="El Aouad, R" uniqKey="El Aouad R" first="R" last="El Aouad">R. El Aouad</name></author><author><name sortKey="Adorno, D" sort="Adorno, D" uniqKey="Adorno D" first="D" last="Adorno">D. Adorno</name></author></analytic><series><title level="j">Tissue antigens</title><idno type="eISSN">1399-0039</idno><imprint><date when="2010" type="published">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adult</term><term>African Continental Ancestry Group (genetics)</term><term>Aged</term><term>Alleles</term><term>Anthropology, Physical</term><term>Female</term><term>Gene Frequency</term><term>Haplotypes (genetics)</term><term>Histocompatibility Antigens Class I (genetics)</term><term>Histocompatibility Antigens Class II (genetics)</term><term>Humans</term><term>Male</term><term>Middle Aged</term><term>Morocco (epidemiology)</term><term>Phylogeny</term><term>Polymorphism, Genetic (genetics)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Histocompatibility Antigens Class I</term><term>Histocompatibility Antigens Class II</term></keywords><keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Morocco</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>African Continental Ancestry Group</term><term>Haplotypes</term><term>Polymorphism, Genetic</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adult</term><term>Aged</term><term>Alleles</term><term>Anthropology, Physical</term><term>Female</term><term>Gene Frequency</term><term>Humans</term><term>Male</term><term>Middle Aged</term><term>Phylogeny</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The aim of this study was to provide genetic and anthropological information on the Chaouya (CH), an Arabic-speaking population living in West Morocco, Atlantic coast (Settat). In 98 unrelated healthy CH volunteers, we first investigated the human leukocyte antigen (HLA) class I and II allele polymorphisms using a sequence-based typing method and examined haplotypes and relatedness of this group to other African and Mediterranean populations. The study showed the close relatedness with Tunisian population and other North Africans, together with a strong influence of various immigrations, mainly Spaniards, French, and Portuguese, as expected. Nevertheless, analysis of class II allele frequencies (afs) showed that Oromo and Amhara Ethiopian groups cluster together with the Berbers and other North Africans, confirming the relationship between these populations (Afro-Asiatic linguistic group, Hamites). South and sub-Saharan Africans cluster separately at a great distance from CH, except the sub-Saharan Bantu population from Congo Kinshasa, which shows a relatively close genetic relationship ascribable to the effect of a diversifying selection. On the other hand, considering HLA class I afs analyses, it was noteworthy that CH grouped together with sub-Saharans, showing a close genetic distance mainly with Ugandas and Kenians Luo.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">20492599</PMID><DateCreated><Year>2010</Year><Month>08</Month><Day>10</Day></DateCreated><DateCompleted><Year>2010</Year><Month>12</Month><Day>03</Day></DateCompleted><DateRevised><Year>2010</Year><Month>08</Month><Day>10</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1399-0039</ISSN><JournalIssue CitedMedium="Internet"><Volume>76</Volume><Issue>3</Issue><PubDate><Year>2010</Year><Month>Sep</Month></PubDate></JournalIssue><Title>Tissue antigens</Title><ISOAbbreviation>Tissue Antigens</ISOAbbreviation></Journal><ArticleTitle>Correlation between genetic HLA class I and II polymorphisms and anthropological aspects in the Chaouya population from Morocco (Arabic speaking).</ArticleTitle><Pagination><MedlinePgn>177-93</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/j.1399-0039.2010.01498.x</ELocationID><Abstract><AbstractText>The aim of this study was to provide genetic and anthropological information on the Chaouya (CH), an Arabic-speaking population living in West Morocco, Atlantic coast (Settat). In 98 unrelated healthy CH volunteers, we first investigated the human leukocyte antigen (HLA) class I and II allele polymorphisms using a sequence-based typing method and examined haplotypes and relatedness of this group to other African and Mediterranean populations. The study showed the close relatedness with Tunisian population and other North Africans, together with a strong influence of various immigrations, mainly Spaniards, French, and Portuguese, as expected. Nevertheless, analysis of class II allele frequencies (afs) showed that Oromo and Amhara Ethiopian groups cluster together with the Berbers and other North Africans, confirming the relationship between these populations (Afro-Asiatic linguistic group, Hamites). South and sub-Saharan Africans cluster separately at a great distance from CH, except the sub-Saharan Bantu population from Congo Kinshasa, which shows a relatively close genetic relationship ascribable to the effect of a diversifying selection. On the other hand, considering HLA class I afs analyses, it was noteworthy that CH grouped together with sub-Saharans, showing a close genetic distance mainly with Ugandas and Kenians Luo.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Canossi</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>CNR Institute Organ Transplants and Immunocitology, L'Aquila, Italy. angelica.canossi@cnr.it</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Piancatelli</LastName><ForeName>D</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Aureli</LastName><ForeName>A</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Oumhani</LastName><ForeName>K</ForeName><Initials>K</Initials></Author><Author ValidYN="Y"><LastName>Ozzella</LastName><ForeName>G</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Del Beato</LastName><ForeName>T</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Liberatore</LastName><ForeName>G</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>El Aouad</LastName><ForeName>R</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Adorno</LastName><ForeName>D</ForeName><Initials>D</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Tissue Antigens</MedlineTA><NlmUniqueID>0331072</NlmUniqueID><ISSNLinking>0001-2815</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D015395">Histocompatibility Antigens Class I</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000949">Histocompatibility Antigens Class II</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000328" MajorTopicYN="N">Adult</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D044383" MajorTopicYN="N">African Continental Ancestry Group</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000368" MajorTopicYN="N">Aged</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000483" MajorTopicYN="N">Alleles</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000885" MajorTopicYN="N">Anthropology, Physical</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005260" MajorTopicYN="N">Female</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005787" MajorTopicYN="N">Gene Frequency</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006239" MajorTopicYN="N">Haplotypes</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015395" MajorTopicYN="N">Histocompatibility Antigens Class I</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000949" MajorTopicYN="N">Histocompatibility Antigens Class II</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008297" MajorTopicYN="N">Male</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008875" MajorTopicYN="N">Middle Aged</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009018" MajorTopicYN="N" Type="Geographic">Morocco</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011110" MajorTopicYN="N">Polymorphism, Genetic</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2010</Year><Month>5</Month><Day>25</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2010</Year><Month>5</Month><Day>25</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2010</Year><Month>12</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">20492599</ArticleId><ArticleId IdType="pii">TAN1498</ArticleId><ArticleId IdType="doi">10.1111/j.1399-0039.2010.01498.x</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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