Genomic Identification of a Novel Mutation in hfq That Provides Multiple Benefits in Evolving Glucose-Limited Populations of Escherichia coli▿ †
Identifieur interne : 001771 ( Pmc/Curation ); précédent : 001770; suivant : 001772Genomic Identification of a Novel Mutation in hfq That Provides Multiple Benefits in Evolving Glucose-Limited Populations of Escherichia coli▿ †
Auteurs : Ram Maharjan ; Zhemin Zhou ; Yan Ren ; Yang Li ; Joël Gaffé ; Dominique Schneider ; Christopher Mckenzie ; Peter R. Reeves ; Thomas Ferenci ; Lei WangSource :
- Journal of Bacteriology [ 0021-9193 ] ; 2010.
Abstract
Beneficial mutations in diversifying glucose-limited
Url:
DOI: 10.1128/JB.00368-10
PubMed: 20543067
PubMed Central: 2937378
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genomic Identification of a Novel Mutation in <italic>hfq</italic> That Provides Multiple Benefits in Evolving Glucose-Limited Populations of <italic>Escherichia coli</italic><xref ref-type="fn" rid="fn2">▿</xref> <xref ref-type="fn" rid="fn1">†</xref> </title><author><name sortKey="Maharjan, Ram" sort="Maharjan, Ram" uniqKey="Maharjan R" first="Ram" last="Maharjan">Ram Maharjan</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Zhou, Zhemin" sort="Zhou, Zhemin" uniqKey="Zhou Z" first="Zhemin" last="Zhou">Zhemin Zhou</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Ren, Yan" sort="Ren, Yan" uniqKey="Ren Y" first="Yan" last="Ren">Yan Ren</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Li, Yang" sort="Li, Yang" uniqKey="Li Y" first="Yang" last="Li">Yang Li</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Gaffe, Joel" sort="Gaffe, Joel" uniqKey="Gaffe J" first="Joël" last="Gaffé">Joël Gaffé</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Schneider, Dominique" sort="Schneider, Dominique" uniqKey="Schneider D" first="Dominique" last="Schneider">Dominique Schneider</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Mckenzie, Christopher" sort="Mckenzie, Christopher" uniqKey="Mckenzie C" first="Christopher" last="Mckenzie">Christopher Mckenzie</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Reeves, Peter R" sort="Reeves, Peter R" uniqKey="Reeves P" first="Peter R." last="Reeves">Peter R. Reeves</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Ferenci, Thomas" sort="Ferenci, Thomas" uniqKey="Ferenci T" first="Thomas" last="Ferenci">Thomas Ferenci</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Wang, Lei" sort="Wang, Lei" uniqKey="Wang L" first="Lei" last="Wang">Lei Wang</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">20543067</idno><idno type="pmc">2937378</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2937378</idno><idno type="RBID">PMC:2937378</idno><idno type="doi">10.1128/JB.00368-10</idno><date when="2010">2010</date><idno type="wicri:Area/Pmc/Corpus">001912</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001912</idno><idno type="wicri:Area/Pmc/Curation">001771</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001771</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genomic Identification of a Novel Mutation in <italic>hfq</italic> That Provides Multiple Benefits in Evolving Glucose-Limited Populations of <italic>Escherichia coli</italic><xref ref-type="fn" rid="fn2">▿</xref> <xref ref-type="fn" rid="fn1">†</xref> </title><author><name sortKey="Maharjan, Ram" sort="Maharjan, Ram" uniqKey="Maharjan R" first="Ram" last="Maharjan">Ram Maharjan</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Zhou, Zhemin" sort="Zhou, Zhemin" uniqKey="Zhou Z" first="Zhemin" last="Zhou">Zhemin Zhou</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Ren, Yan" sort="Ren, Yan" uniqKey="Ren Y" first="Yan" last="Ren">Yan Ren</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Li, Yang" sort="Li, Yang" uniqKey="Li Y" first="Yang" last="Li">Yang Li</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Gaffe, Joel" sort="Gaffe, Joel" uniqKey="Gaffe J" first="Joël" last="Gaffé">Joël Gaffé</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Schneider, Dominique" sort="Schneider, Dominique" uniqKey="Schneider D" first="Dominique" last="Schneider">Dominique Schneider</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Mckenzie, Christopher" sort="Mckenzie, Christopher" uniqKey="Mckenzie C" first="Christopher" last="Mckenzie">Christopher Mckenzie</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Reeves, Peter R" sort="Reeves, Peter R" uniqKey="Reeves P" first="Peter R." last="Reeves">Peter R. Reeves</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Ferenci, Thomas" sort="Ferenci, Thomas" uniqKey="Ferenci T" first="Thomas" last="Ferenci">Thomas Ferenci</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author><author><name sortKey="Wang, Lei" sort="Wang, Lei" uniqKey="Wang L" first="Lei" last="Wang">Lei Wang</name><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation><affiliation><nlm:aff id="aff1"></nlm:aff></affiliation></author></analytic><series><title level="j">Journal of Bacteriology</title><idno type="ISSN">0021-9193</idno><idno type="eISSN">1098-5530</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Beneficial mutations in diversifying glucose-limited <italic>Escherichia coli</italic> populations are mostly unidentified. The genome of an evolved isolate with multiple differences from that of the ancestor was fully assembled. Remarkably, a single mutation in <italic>hfq</italic> was responsible for the multiple benefits under glucose limitation through changes in at least five regulation targets.</p></div></front></TEI><pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">J Bacteriol</journal-id><journal-id journal-id-type="publisher-id">jbacter</journal-id><journal-title-group><journal-title>Journal of Bacteriology</journal-title></journal-title-group><issn pub-type="ppub">0021-9193</issn><issn pub-type="epub">1098-5530</issn><publisher><publisher-name>American Society for Microbiology (ASM)</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">20543067</article-id><article-id pub-id-type="pmc">2937378</article-id><article-id pub-id-type="publisher-id">0368-10</article-id><article-id pub-id-type="doi">10.1128/JB.00368-10</article-id><article-categories><subj-group subj-group-type="heading"><subject>Population Genetics and Evolution</subject></subj-group></article-categories><title-group><article-title>Genomic Identification of a Novel Mutation in <italic>hfq</italic> That Provides Multiple Benefits in Evolving Glucose-Limited Populations of <italic>Escherichia coli</italic><xref ref-type="fn" rid="fn2">▿</xref> <xref ref-type="fn" rid="fn1">†</xref> </article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Maharjan</surname><given-names>Ram</given-names></name><xref ref-type="aff" rid="aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Zhou</surname><given-names>Zhemin</given-names></name><xref ref-type="aff" rid="aff1">2</xref><xref ref-type="aff" rid="aff1">3</xref></contrib><contrib contrib-type="author"><name><surname>Ren</surname><given-names>Yan</given-names></name><xref ref-type="aff" rid="aff1">2</xref><xref ref-type="aff" rid="aff1">4</xref></contrib><contrib contrib-type="author"><name><surname>Li</surname><given-names>Yang</given-names></name><xref ref-type="aff" rid="aff1">2</xref><xref ref-type="aff" rid="aff1">5</xref></contrib><contrib contrib-type="author"><name><surname>Gaffé</surname><given-names>Joël</given-names></name><xref ref-type="aff" rid="aff1">7</xref></contrib><contrib contrib-type="author"><name><surname>Schneider</surname><given-names>Dominique</given-names></name><xref ref-type="aff" rid="aff1">7</xref></contrib><contrib contrib-type="author"><name><surname>McKenzie</surname><given-names>Christopher</given-names></name><xref ref-type="aff" rid="aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Reeves</surname><given-names>Peter R.</given-names></name><xref ref-type="aff" rid="aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Ferenci</surname><given-names>Thomas</given-names></name><xref ref-type="aff" rid="aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Wang</surname><given-names>Lei</given-names></name><xref ref-type="aff" rid="aff1">2</xref><xref ref-type="aff" rid="aff1">3</xref><xref ref-type="aff" rid="aff1">4</xref><xref ref-type="aff" rid="aff1">5</xref><xref ref-type="aff" rid="aff1">6</xref><xref ref-type="corresp" rid="cor1">*</xref></contrib></contrib-group><aff id="aff1">School of Molecular Bioscience, University of Sydney, New South Wales 2006, Australia,<label>1</label> TEDA School of Biological Sciences and Biotechnology, Nankai University,<label>2</label> Tianjin Key Laboratory of Microbial Functional Genomics,<label>3</label> Tianjin Research Center for Functional Genomics and Biochip,<label>4</label> Engineering and Research Center for Microbial Functional Genomics and Detection Technology, Ministry of Education,<label>5</label> Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, 23 Hongda Street, Tianjin Economic-Technological Development Area (TEDA), Tianjin 300457, China,<label>6</label> Laboratoire Adaptation et Pathogénie des Microorganismes, CNRS UMR5163, Université Joseph Fourier, Institut Jean Roget, Domaine de la Merci BP170, 38042 Grenoble Cedex 9, France<label>7</label></aff><author-notes><corresp id="cor1"><label>*</label>Corresponding author. Mailing address: TEDA School of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, TEDA, Tianjin 300457, P. R. China. Phone: 86-22-66229588. Fax: 86-22-66229596. E-mail: <email>wanglei@nankai.edu.cn</email></corresp></author-notes><pub-date pub-type="ppub"><month>9</month><year>2010</year></pub-date><pub-date pub-type="epub"><day>11</day><month>6</month><year>2010</year></pub-date><volume>192</volume><issue>17</issue><fpage>4517</fpage><lpage>4521</lpage><history><date date-type="received"><day>2</day><month>4</month><year>2010</year></date><date date-type="accepted"><day>2</day><month>6</month><year>2010</year></date></history><permissions><copyright-statement>Copyright © 2010, American Society for Microbiology</copyright-statement><copyright-year>2010</copyright-year></permissions><self-uri xlink:title="pdf" xlink:href="zjb01710004517.pdf"></self-uri><abstract><p>Beneficial mutations in diversifying glucose-limited <italic>Escherichia coli</italic> populations are mostly unidentified. The genome of an evolved isolate with multiple differences from that of the ancestor was fully assembled. Remarkably, a single mutation in <italic>hfq</italic> was responsible for the multiple benefits under glucose limitation through changes in at least five regulation targets.</p></abstract></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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