The Effects of Paleoclimatic Events on Mediterranean Trout: Preliminary Evidences from Ancient DNA
Identifieur interne : 000716 ( Ncbi/Merge ); précédent : 000715; suivant : 000717The Effects of Paleoclimatic Events on Mediterranean Trout: Preliminary Evidences from Ancient DNA
Auteurs : Andrea Splendiani [Italie] ; Tatiana Fioravanti [Italie] ; Massimo Giovannotti [Italie] ; Alessandra Negri [Italie] ; Paolo Ruggeri [Italie] ; Luigi Olivieri [Italie] ; Paola Nisi Cerioni [Italie] ; Massimo Lorenzoni [Italie] ; Vincenzo Caputo Barucchi [Italie]Source :
- PLoS ONE [ 1932-6203 ] ; 2016.
Abstract
In this pilot study for the first time, ancient DNA has been extracted from bone remains of
Url:
DOI: 10.1371/journal.pone.0157975
PubMed: 27331397
PubMed Central: 4917132
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PMC:4917132Le document en format XML
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<author><name sortKey="Caputo Barucchi, Vincenzo" sort="Caputo Barucchi, Vincenzo" uniqKey="Caputo Barucchi V" first="Vincenzo" last="Caputo Barucchi">Vincenzo Caputo Barucchi</name>
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<front><div type="abstract" xml:lang="en"><p>In this pilot study for the first time, ancient DNA has been extracted from bone remains of <italic>Salmo trutta</italic>
. These samples were from a stratigraphic succession located in a coastal cave of Calabria (southern Italy) inhabited by humans from upper Palaeolithic to historical times. Seven pairs of primers were used to PCR-amplify and sequence from 128 to 410 bp of the mtDNA control region of eleven samples. Three haplotypes were observed: two (ADcs-1 and MEcs-1) already described in rivers from the Italian peninsula; one (ATcs-33) belonging to the southern Atlantic clade of the AT <italic>Salmo trutta</italic>
mtDNA lineage (<italic>sensu</italic>
Bernatchez). The prehistoric occurrence of this latter haplotype in the water courses of the Italian peninsula has been detected for the first time in this study. Finally, we observed a correspondence between frequency of trout remains and variation in haplotype diversity that we related with ecological and demographic changes resulting from a period of rapid cooling known as the Younger Dryas.</p>
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</author>
<author><name sortKey="Finney, S" uniqKey="Finney S">S Finney</name>
</author>
<author><name sortKey="Gibbard, P" uniqKey="Gibbard P">P Gibbard</name>
</author>
<author><name sortKey="Fan, J" uniqKey="Fan J">J Fan</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="Hewitt, Gm" uniqKey="Hewitt G">GM Hewitt</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Hewitt, Gm" uniqKey="Hewitt G">GM Hewitt</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="De Bruyn, M" uniqKey="De Bruyn M">M de Bruyn</name>
</author>
<author><name sortKey="Hoelzel, Ar" uniqKey="Hoelzel A">AR Hoelzel</name>
</author>
<author><name sortKey="Carvalho, Gr" uniqKey="Carvalho G">GR Carvalho</name>
</author>
<author><name sortKey="Hofreiter, M" uniqKey="Hofreiter M">M Hofreiter</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="Bellard, C" uniqKey="Bellard C">C Bellard</name>
</author>
<author><name sortKey="Bertelsmeier, C" uniqKey="Bertelsmeier C">C Bertelsmeier</name>
</author>
<author><name sortKey="Leadley, P" uniqKey="Leadley P">P Leadley</name>
</author>
<author><name sortKey="Thuiller, W" uniqKey="Thuiller W">W Thuiller</name>
</author>
<author><name sortKey="Courchamp, F" uniqKey="Courchamp F">F Courchamp</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nelson, Js" uniqKey="Nelson J">JS Nelson</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Dudgeon, D" uniqKey="Dudgeon D">D Dudgeon</name>
</author>
<author><name sortKey="Arthington, H" uniqKey="Arthington H">H Arthington</name>
</author>
<author><name sortKey="Gessner, Mo" uniqKey="Gessner M">MO Gessner</name>
</author>
<author><name sortKey="Kawabata, Zi" uniqKey="Kawabata Z">ZI Kawabata</name>
</author>
<author><name sortKey="Knowler, Dj" uniqKey="Knowler D">DJ Knowler</name>
</author>
<author><name sortKey="Leveque, C" uniqKey="Leveque C">C Lévêque</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct><analytic><author><name sortKey="Sala, Oe" uniqKey="Sala O">OE Sala</name>
</author>
<author><name sortKey="Chapin, F" uniqKey="Chapin F">F Chapin</name>
</author>
<author><name sortKey="Stuart, A" uniqKey="Stuart A">A Stuart</name>
</author>
<author><name sortKey="Juan, J" uniqKey="Juan J">J Juan</name>
</author>
<author><name sortKey="Berlow, E" uniqKey="Berlow E">E Berlow</name>
</author>
<author><name sortKey="Bloomfield, J" uniqKey="Bloomfield J">J Bloomfield</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Pereira, M" uniqKey="Pereira M">M Pereira</name>
</author>
<author><name sortKey="Leadley, Pw" uniqKey="Leadley P">PW Leadley</name>
</author>
<author><name sortKey="Proenca, V" uniqKey="Proenca V">V Proença</name>
</author>
<author><name sortKey="Alkemade, R" uniqKey="Alkemade R">R Alkemade</name>
</author>
<author><name sortKey="Scharlemann, Jpw" uniqKey="Scharlemann J">JPW Scharlemann</name>
</author>
<author><name sortKey="Fernez Manjarres, Jf" uniqKey="Fernez Manjarres J">JF Fernez-Manjarrés</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Xenopoulos, Ma" uniqKey="Xenopoulos M">MA Xenopoulos</name>
</author>
<author><name sortKey="Lodge, Dm" uniqKey="Lodge D">DM Lodge</name>
</author>
<author><name sortKey="Alcamo, J" uniqKey="Alcamo J">J Alcamo</name>
</author>
<author><name sortKey="M Rker, M" uniqKey="M Rker M">M Märker</name>
</author>
<author><name sortKey="Schulze, K" uniqKey="Schulze K">K Schulze</name>
</author>
<author><name sortKey="Van Vuuren, Dp" uniqKey="Van Vuuren D">DP Van Vuuren</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Ficke, Ad" uniqKey="Ficke A">AD Ficke</name>
</author>
<author><name sortKey="Myrick, Ca" uniqKey="Myrick C">CA Myrick</name>
</author>
<author><name sortKey="Hansen, Lj" uniqKey="Hansen L">LJ Hansen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Jonsson, B" uniqKey="Jonsson B">B Jonsson</name>
</author>
<author><name sortKey="Jonsson, N" uniqKey="Jonsson N">N Jonsson</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="Waples, Rs" uniqKey="Waples R">RS Waples</name>
</author>
<author><name sortKey="Pess, Gr" uniqKey="Pess G">GR Pess</name>
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<author><name sortKey="Beechie, T" uniqKey="Beechie T">T Beechie</name>
</author>
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<biblStruct><analytic><author><name sortKey="Elliot, Jm" uniqKey="Elliot J">JM Elliot</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="Snoj, A" uniqKey="Snoj A">A Snoj</name>
</author>
<author><name sortKey="Mar Eta, B" uniqKey="Mar Eta B">B Marčeta</name>
</author>
<author><name sortKey="Susnik, S" uniqKey="Susnik S">S Sušnik</name>
</author>
<author><name sortKey="Melki, E" uniqKey="Melki E">E Melkič</name>
</author>
<author><name sortKey="Megli, Vl" uniqKey="Megli V">Vl Meglič</name>
</author>
<author><name sortKey="Dov, P" uniqKey="Dov P">P Dovč</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Bernatchez, L" uniqKey="Bernatchez L">L Bernatchez</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Suarez, J" uniqKey="Suarez J">J Suárez</name>
</author>
<author><name sortKey="Bautista, Jm" uniqKey="Bautista J">JM Bautista</name>
</author>
<author><name sortKey="Almod Var, A" uniqKey="Almod Var A">A Almodóvar</name>
</author>
<author><name sortKey="Machordom, A" uniqKey="Machordom A">A Machordom</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cortey, M" uniqKey="Cortey M">M Cortey</name>
</author>
<author><name sortKey="Vera, M" uniqKey="Vera M">M Vera</name>
</author>
<author><name sortKey="Pla, C" uniqKey="Pla C">C Pla</name>
</author>
<author><name sortKey="Garcia Marin, Jl" uniqKey="Garcia Marin J">JL García-Marín</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Consuegra, S" uniqKey="Consuegra S">S Consuegra</name>
</author>
<author><name sortKey="Garcia De Leaniz, C" uniqKey="Garcia De Leaniz C">C García de Leániz</name>
</author>
<author><name sortKey="Serdio, A" uniqKey="Serdio A">A Serdio</name>
</author>
<author><name sortKey="Gonzalez Morales, M" uniqKey="Gonzalez Morales M">M González Morales</name>
</author>
<author><name sortKey="Straus, L" uniqKey="Straus L">L Straus</name>
</author>
<author><name sortKey="Knox, D" uniqKey="Knox D">D Knox</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Turrero, P" uniqKey="Turrero P">P Turrero</name>
</author>
<author><name sortKey="Horreo, J" uniqKey="Horreo J">J Horreo</name>
</author>
<author><name sortKey="Garcia Vazquez, E" uniqKey="Garcia Vazquez E">E Garcia-Vazquez</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Hagelberg, E" uniqKey="Hagelberg E">E Hagelberg</name>
</author>
<author><name sortKey="Hofreiter, M" uniqKey="Hofreiter M">M Hofreiter</name>
</author>
<author><name sortKey="Keyser, C" uniqKey="Keyser C">C Keyser</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Leonard, Ja" uniqKey="Leonard J">JA Leonard</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Dalen, L" uniqKey="Dalen L">L Dalén</name>
</author>
<author><name sortKey="Nystrom, V" uniqKey="Nystrom V">V Nyström</name>
</author>
<author><name sortKey="Valdiosera, C" uniqKey="Valdiosera C">C Valdiosera</name>
</author>
<author><name sortKey="Germonpre, M" uniqKey="Germonpre M">M Germonpré</name>
</author>
<author><name sortKey="Sablin, M" uniqKey="Sablin M">M Sablin</name>
</author>
<author><name sortKey="Turner, E" uniqKey="Turner E">E Turner</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Campos, Pf" uniqKey="Campos P">PF Campos</name>
</author>
<author><name sortKey="Kristensen, T" uniqKey="Kristensen T">T Kristensen</name>
</author>
<author><name sortKey="Orlando, L" uniqKey="Orlando L">L Orlando</name>
</author>
<author><name sortKey="Sher, A" uniqKey="Sher A">A Sher</name>
</author>
<author><name sortKey="Kholodova, Mv" uniqKey="Kholodova M">MV Kholodova</name>
</author>
<author><name sortKey="Gotherstrom, A" uniqKey="Gotherstrom A">A Götherström</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Foote, Ad" uniqKey="Foote A">AD Foote</name>
</author>
<author><name sortKey="Kaschner, K" uniqKey="Kaschner K">K Kaschner</name>
</author>
<author><name sortKey="Schultze, Se" uniqKey="Schultze S">SE Schultze</name>
</author>
<author><name sortKey="Garilao, C" uniqKey="Garilao C">C Garilao</name>
</author>
<author><name sortKey="Ho, Syw" uniqKey="Ho S">SYW Ho</name>
</author>
<author><name sortKey="Post, K" uniqKey="Post K">K Post</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lorenzen, Ed" uniqKey="Lorenzen E">ED Lorenzen</name>
</author>
<author><name sortKey="Nogues Bravo, D" uniqKey="Nogues Bravo D">D Nogués-Bravo</name>
</author>
<author><name sortKey="Orlo, L" uniqKey="Orlo L">L Orlo</name>
</author>
<author><name sortKey="Weinstock, J" uniqKey="Weinstock J">J Weinstock</name>
</author>
<author><name sortKey="Binladen, J" uniqKey="Binladen J">J Binladen</name>
</author>
<author><name sortKey="Marske, Ka" uniqKey="Marske K">KA Marske</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Arndt, A" uniqKey="Arndt A">A Arndt</name>
</author>
<author><name sortKey="Van Neer, W" uniqKey="Van Neer W">W Van Neer</name>
</author>
<author><name sortKey="Hellemans, B" uniqKey="Hellemans B">B Hellemans</name>
</author>
<author><name sortKey="Robben, J" uniqKey="Robben J">J Robben</name>
</author>
<author><name sortKey="Volckaert, F" uniqKey="Volckaert F">F Volckaert</name>
</author>
<author><name sortKey="Waelkens, M" uniqKey="Waelkens M">M Waelkens</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Yang, Dy" uniqKey="Yang D">DY Yang</name>
</author>
<author><name sortKey="Cannon, A" uniqKey="Cannon A">A Cannon</name>
</author>
<author><name sortKey="Saunders, Sr" uniqKey="Saunders S">SR Saunders</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Speller, Cf" uniqKey="Speller C">CF Speller</name>
</author>
<author><name sortKey="Yang, Dy" uniqKey="Yang D">DY Yang</name>
</author>
<author><name sortKey="Hayden, B" uniqKey="Hayden B">B Hayden</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Pages, M" uniqKey="Pages M">M Pagès</name>
</author>
<author><name sortKey="Desse Berset, N" uniqKey="Desse Berset N">N Desse-Berset</name>
</author>
<author><name sortKey="Tougard, C" uniqKey="Tougard C">C Tougard</name>
</author>
<author><name sortKey="Brosse, L" uniqKey="Brosse L">L Brosse</name>
</author>
<author><name sortKey="H Nni, C" uniqKey="H Nni C">C Hänni</name>
</author>
<author><name sortKey="Berrebi, P" uniqKey="Berrebi P">P Berrebi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Halffman, Cm" uniqKey="Halffman C">CM Halffman</name>
</author>
<author><name sortKey="Potter, Ba" uniqKey="Potter B">BA Potter</name>
</author>
<author><name sortKey="Mckinney, Hj" uniqKey="Mckinney H">HJ McKinney</name>
</author>
<author><name sortKey="Finney, Bp" uniqKey="Finney B">BP Finney</name>
</author>
<author><name sortKey="Rodrigues, At" uniqKey="Rodrigues A">AT Rodrigues</name>
</author>
<author><name sortKey="Yang, Dy" uniqKey="Yang D">DY Yang</name>
</author>
<author><name sortKey="Kemp, Bm" uniqKey="Kemp B">BM Kemp</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Mannino, Ma" uniqKey="Mannino M">MA Mannino</name>
</author>
<author><name sortKey="Di Salvo, R" uniqKey="Di Salvo R">R Di Salvo</name>
</author>
<author><name sortKey="Schimmenti, V" uniqKey="Schimmenti V">V Schimmenti</name>
</author>
<author><name sortKey="Di Patti, C" uniqKey="Di Patti C">C Di Patti</name>
</author>
<author><name sortKey="Incarbona, A" uniqKey="Incarbona A">A Incarbona</name>
</author>
<author><name sortKey="Sineo, L" uniqKey="Sineo L">L Sineo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Mu Oz, M" uniqKey="Mu Oz M">M Muñoz</name>
</author>
<author><name sortKey="Casadevall, M" uniqKey="Casadevall M">M Casadevall</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Albertini, D" uniqKey="Albertini D">D Albertini</name>
</author>
<author><name sortKey="Tagliacozzo, A" uniqKey="Tagliacozzo A">A Tagliacozzo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Van Neer, W" uniqKey="Van Neer W">W Van Neer</name>
</author>
<author><name sortKey="Wouters, W" uniqKey="Wouters W">W Wouters</name>
</author>
<author><name sortKey="Germonpre, Mietje" uniqKey="Germonpre M">Mietje Germonpré</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Russ, H" uniqKey="Russ H">H Russ</name>
</author>
<author><name sortKey="Jones, Ak" uniqKey="Jones A">AK Jones</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Turrero, P" uniqKey="Turrero P">P Turrero</name>
</author>
<author><name sortKey="Horreo, Jl" uniqKey="Horreo J">JL Horreo</name>
</author>
<author><name sortKey="L Pez, B" uniqKey="L Pez B">B López</name>
</author>
<author><name sortKey="Pola, Ig" uniqKey="Pola I">IG Pola</name>
</author>
<author><name sortKey="Arbizu, M" uniqKey="Arbizu M">M Arbizu</name>
</author>
<author><name sortKey="Garcia Vazquez, E" uniqKey="Garcia Vazquez E">E García Vázquez</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cardini, L" uniqKey="Cardini L">L Cardini</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Durante, S" uniqKey="Durante S">S Durante</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Scarciglia, F" uniqKey="Scarciglia F">F Scarciglia</name>
</author>
<author><name sortKey="Robustelli, G" uniqKey="Robustelli G">G Robustelli</name>
</author>
<author><name sortKey="Tine, V" uniqKey="Tine V">V Tiné</name>
</author>
<author><name sortKey="Russa, Mfl" uniqKey="Russa M">MFL Russa</name>
</author>
<author><name sortKey="Abate, M" uniqKey="Abate M">M Abate</name>
</author>
<author><name sortKey="Pezzino, A" uniqKey="Pezzino A">A Pezzino</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Alessio, M" uniqKey="Alessio M">M Alessio</name>
</author>
<author><name sortKey="Bella, F" uniqKey="Bella F">F Bella</name>
</author>
<author><name sortKey="Bachechi, F" uniqKey="Bachechi F">F Bachechi</name>
</author>
<author><name sortKey="Cortesi, C" uniqKey="Cortesi C">C Cortesi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Alessio, M" uniqKey="Alessio M">M Alessio</name>
</author>
<author><name sortKey="Bella, F" uniqKey="Bella F">F Bella</name>
</author>
<author><name sortKey="Bachechi, F" uniqKey="Bachechi F">F Bachechi</name>
</author>
<author><name sortKey="Cortesi, C" uniqKey="Cortesi C">C Cortesi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Weninger, B" uniqKey="Weninger B">B Weninger</name>
</author>
<author><name sortKey="Joris, O" uniqKey="Joris O">O Jöris</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Hughen, Ka" uniqKey="Hughen K">KA Hughen</name>
</author>
<author><name sortKey="Baillie, Mgl" uniqKey="Baillie M">MGL Baillie</name>
</author>
<author><name sortKey="Bard, E" uniqKey="Bard E">E Bard</name>
</author>
<author><name sortKey="Bayliss, A" uniqKey="Bayliss A">A Bayliss</name>
</author>
<author><name sortKey="Beck, Jw" uniqKey="Beck J">JW Beck</name>
</author>
<author><name sortKey="Bertrand, C" uniqKey="Bertrand C">C Bertrand</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cooper, A" uniqKey="Cooper A">A Cooper</name>
</author>
<author><name sortKey="Poinar, Hn" uniqKey="Poinar H">HN Poinar</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="P Bo, S" uniqKey="P Bo S">S Pääbo</name>
</author>
<author><name sortKey="Poinar, H" uniqKey="Poinar H">H Poinar</name>
</author>
<author><name sortKey="Serre, D" uniqKey="Serre D">D Serre</name>
</author>
<author><name sortKey="Jaenicke Despres, V" uniqKey="Jaenicke Despres V">V Jaenicke-Després</name>
</author>
<author><name sortKey="Hebler, J" uniqKey="Hebler J">J Hebler</name>
</author>
<author><name sortKey="Rohland, N" uniqKey="Rohland N">N Rohland</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Knapp, M" uniqKey="Knapp M">M Knapp</name>
</author>
<author><name sortKey="Clarke, Ac" uniqKey="Clarke A">AC Clarke</name>
</author>
<author><name sortKey="Horsburgh, Ka" uniqKey="Horsburgh K">KA Horsburgh</name>
</author>
<author><name sortKey="Matisoo Smith, Ea" uniqKey="Matisoo Smith E">EA Matisoo-Smith</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Altschull, Sf" uniqKey="Altschull S">SF Altschull</name>
</author>
<author><name sortKey="Gish, W" uniqKey="Gish W">W Gish</name>
</author>
<author><name sortKey="Miller, W" uniqKey="Miller W">W Miller</name>
</author>
<author><name sortKey="Myers, Ew" uniqKey="Myers E">EW Myers</name>
</author>
<author><name sortKey="Lipman, Dj" uniqKey="Lipman D">DJ Lipman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Thompson, Jd" uniqKey="Thompson J">JD Thompson</name>
</author>
<author><name sortKey="Higgins, Dg" uniqKey="Higgins D">DG Higgins</name>
</author>
<author><name sortKey="Gibson, Tj" uniqKey="Gibson T">TJ Gibson</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Larkin, Ma" uniqKey="Larkin M">MA Larkin</name>
</author>
<author><name sortKey="Blackshields, G" uniqKey="Blackshields G">G Blackshields</name>
</author>
<author><name sortKey="Brown, Np" uniqKey="Brown N">NP Brown</name>
</author>
<author><name sortKey="Chenna, R" uniqKey="Chenna R">R Chenna</name>
</author>
<author><name sortKey="Mcgettigan, Pa" uniqKey="Mcgettigan P">PA McGettigan</name>
</author>
<author><name sortKey="Mcwilliam, H" uniqKey="Mcwilliam H">H McWilliam</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Clement, M" uniqKey="Clement M">M Clement</name>
</author>
<author><name sortKey="Posada, D" uniqKey="Posada D">D Posada</name>
</author>
<author><name sortKey="Crandall, K" uniqKey="Crandall K">K Crandall</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Leigh, Jw" uniqKey="Leigh J">JW Leigh</name>
</author>
<author><name sortKey="Bryant, D" uniqKey="Bryant D">D Bryant</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Cortey, M" uniqKey="Cortey M">M Cortey</name>
</author>
<author><name sortKey="Pla, C" uniqKey="Pla C">C Pla</name>
</author>
<author><name sortKey="Garcia Marin, J" uniqKey="Garcia Marin J">J García-Marín</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fisher, Tg" uniqKey="Fisher T">TG Fisher</name>
</author>
<author><name sortKey="Smith, Dg" uniqKey="Smith D">DG Smith</name>
</author>
<author><name sortKey="Andrew, Jt" uniqKey="Andrew J">JT Andrew</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Snoj, A" uniqKey="Snoj A">A Snoj</name>
</author>
<author><name sortKey="Mari, S" uniqKey="Mari S">S Marić</name>
</author>
<author><name sortKey="Bajec Susnik, S" uniqKey="Bajec Susnik S">S Bajec Sušnik</name>
</author>
<author><name sortKey="Berrebi, P" uniqKey="Berrebi P">P Berrebi</name>
</author>
<author><name sortKey="Janjani, S" uniqKey="Janjani S">S Janjani</name>
</author>
<author><name sortKey="Schoffmann, J" uniqKey="Schoffmann J">J Schöffmann</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fruciano, C" uniqKey="Fruciano C">C Fruciano</name>
</author>
<author><name sortKey="Pappalardo, Am" uniqKey="Pappalardo A">AM Pappalardo</name>
</author>
<author><name sortKey="Tigano, C" uniqKey="Tigano C">C Tigano</name>
</author>
<author><name sortKey="Ferrito, V" uniqKey="Ferrito V">V Ferrito</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Clavero, M" uniqKey="Clavero M">M Clavero</name>
</author>
<author><name sortKey="Hermoso, V" uniqKey="Hermoso V">V Hermoso</name>
</author>
<author><name sortKey="Levin, N" uniqKey="Levin N">N Levin</name>
</author>
<author><name sortKey="Kark, S" uniqKey="Kark S">S Kark</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Almod Var, A" uniqKey="Almod Var A">A Almodóvar</name>
</author>
<author><name sortKey="Nicola, Gg" uniqKey="Nicola G">GG Nicola</name>
</author>
<author><name sortKey="Ayll N, D" uniqKey="Ayll N D">D Ayllón</name>
</author>
<author><name sortKey="Elvira, B" uniqKey="Elvira B">B Elvira</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Filipe, Af" uniqKey="Filipe A">AF Filipe</name>
</author>
<author><name sortKey="Markovic, D" uniqKey="Markovic D">D Markovic</name>
</author>
<author><name sortKey="Pletterbauer, F" uniqKey="Pletterbauer F">F Pletterbauer</name>
</author>
<author><name sortKey="Tisseuil, C" uniqKey="Tisseuil C">C Tisseuil</name>
</author>
<author><name sortKey="Wever, A" uniqKey="Wever A">A Wever</name>
</author>
<author><name sortKey="Schmutz, S" uniqKey="Schmutz S">S Schmutz</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Blanchet, S" uniqKey="Blanchet S">S Blanchet</name>
</author>
<author><name sortKey="Dubut, V" uniqKey="Dubut V">V Dubut</name>
</author>
</analytic>
</biblStruct>
</listBibl>
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<pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">PLoS One</journal-id>
<journal-id journal-id-type="iso-abbrev">PLoS ONE</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
<journal-id journal-id-type="pmc">plosone</journal-id>
<journal-title-group><journal-title>PLoS ONE</journal-title>
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<issn pub-type="epub">1932-6203</issn>
<publisher><publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, CA USA</publisher-loc>
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<article-meta><article-id pub-id-type="pmid">27331397</article-id>
<article-id pub-id-type="pmc">4917132</article-id>
<article-id pub-id-type="doi">10.1371/journal.pone.0157975</article-id>
<article-id pub-id-type="publisher-id">PONE-D-15-54894</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject>
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<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Evolutionary Biology</subject>
<subj-group><subject>Population Genetics</subject>
<subj-group><subject>Haplotypes</subject>
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<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
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<subj-group><subject>Population Genetics</subject>
<subj-group><subject>Haplotypes</subject>
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</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Population Biology</subject>
<subj-group><subject>Population Genetics</subject>
<subj-group><subject>Haplotypes</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Earth Sciences</subject>
<subj-group><subject>Atmospheric Science</subject>
<subj-group><subject>Climatology</subject>
<subj-group><subject>Paleoclimatology</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Paleontology</subject>
<subj-group><subject>Paleoclimatology</subject>
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<subj-group subj-group-type="Discipline-v3"><subject>Earth Sciences</subject>
<subj-group><subject>Paleontology</subject>
<subj-group><subject>Paleoclimatology</subject>
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</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Organisms</subject>
<subj-group><subject>Animals</subject>
<subj-group><subject>Vertebrates</subject>
<subj-group><subject>Fishes</subject>
<subj-group><subject>Osteichthyes</subject>
<subj-group><subject>Trout</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject>
<subj-group><subject>Genetics</subject>
<subj-group><subject>DNA</subject>
<subj-group><subject>Forms of DNA</subject>
<subj-group><subject>Mitochondrial DNA</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject>
<subj-group><subject>Biochemistry</subject>
<subj-group><subject>Nucleic acids</subject>
<subj-group><subject>DNA</subject>
<subj-group><subject>Forms of DNA</subject>
<subj-group><subject>Mitochondrial DNA</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Paleontology</subject>
<subj-group><subject>Paleogenetics</subject>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Earth Sciences</subject>
<subj-group><subject>Paleontology</subject>
<subj-group><subject>Paleogenetics</subject>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Organisms</subject>
<subj-group><subject>Animals</subject>
<subj-group><subject>Vertebrates</subject>
<subj-group><subject>Fishes</subject>
<subj-group><subject>Freshwater Fish</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and Life Sciences</subject>
<subj-group><subject>Molecular Biology</subject>
<subj-group><subject>Molecular Biology Techniques</subject>
<subj-group><subject>Artificial Gene Amplification and Extension</subject>
<subj-group><subject>Polymerase Chain Reaction</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Research and Analysis Methods</subject>
<subj-group><subject>Molecular Biology Techniques</subject>
<subj-group><subject>Artificial Gene Amplification and Extension</subject>
<subj-group><subject>Polymerase Chain Reaction</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Earth Sciences</subject>
<subj-group><subject>Atmospheric Science</subject>
<subj-group><subject>Climatology</subject>
<subj-group><subject>Climate Change</subject>
</subj-group>
</subj-group>
</subj-group>
</subj-group>
</article-categories>
<title-group><article-title>The Effects of Paleoclimatic Events on Mediterranean Trout: Preliminary Evidences from Ancient DNA</article-title>
<alt-title alt-title-type="running-head">Pelistocene-Holocene mtDNA Variability in Brown Trout</alt-title>
</title-group>
<contrib-group><contrib contrib-type="author" equal-contrib="yes"><name><surname>Splendiani</surname>
<given-names>Andrea</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes"><name><surname>Fioravanti</surname>
<given-names>Tatiana</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Giovannotti</surname>
<given-names>Massimo</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Negri</surname>
<given-names>Alessandra</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Ruggeri</surname>
<given-names>Paolo</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Olivieri</surname>
<given-names>Luigi</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Nisi Cerioni</surname>
<given-names>Paola</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Lorenzoni</surname>
<given-names>Massimo</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Caputo Barucchi</surname>
<given-names>Vincenzo</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff003"><sup>3</sup>
</xref>
<xref ref-type="corresp" rid="cor001">*</xref>
</contrib>
</contrib-group>
<aff id="aff001"><label>1</label>
<addr-line>Dipartimento di Scienze della Vita e dell'Ambiente (DiSVA), Università Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona, Italy</addr-line>
</aff>
<aff id="aff002"><label>2</label>
<addr-line>Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce di Sotto, 06123 Perugia, Italy</addr-line>
</aff>
<aff id="aff003"><label>3</label>
<addr-line>Istituto Italiano di Paleontologia Umana, Is.I.P.U., Convitto Nazionale Regina Margherita, Piazza Ruggero Bonghi 2. 03012 Anagni, Italy</addr-line>
</aff>
<contrib-group><contrib contrib-type="editor"><name><surname>Consuegra</surname>
<given-names>Sofia</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"></xref>
</contrib>
</contrib-group>
<aff id="edit1"><addr-line>Swansea University, UNITED KINGDOM</addr-line>
</aff>
<author-notes><fn fn-type="conflict" id="coi001"><p><bold>Competing Interests: </bold>
The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con" id="contrib001"><p>Conceived and designed the experiments: AS VCB. Performed the experiments: AS TF LO PNC. Analyzed the data: AS TF AN PR. Contributed reagents/materials/analysis tools: VCB MG. Wrote the paper: AS TF AN MG PR ML VCB.</p>
</fn>
<corresp id="cor001">* E-mail: <email>v.caputo@univpm.it</email>
</corresp>
</author-notes>
<pub-date pub-type="epub"><day>22</day>
<month>6</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection"><year>2016</year>
</pub-date>
<volume>11</volume>
<issue>6</issue>
<elocation-id>e0157975</elocation-id>
<history><date date-type="received"><day>21</day>
<month>12</month>
<year>2015</year>
</date>
<date date-type="accepted"><day>8</day>
<month>6</month>
<year>2016</year>
</date>
</history>
<permissions><copyright-statement>© 2016 Splendiani et al</copyright-statement>
<copyright-year>2016</copyright-year>
<copyright-holder>Splendiani et al</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License</ext-link>
, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri content-type="pdf" xlink:href="pone.0157975.pdf"></self-uri>
<abstract><p>In this pilot study for the first time, ancient DNA has been extracted from bone remains of <italic>Salmo trutta</italic>
. These samples were from a stratigraphic succession located in a coastal cave of Calabria (southern Italy) inhabited by humans from upper Palaeolithic to historical times. Seven pairs of primers were used to PCR-amplify and sequence from 128 to 410 bp of the mtDNA control region of eleven samples. Three haplotypes were observed: two (ADcs-1 and MEcs-1) already described in rivers from the Italian peninsula; one (ATcs-33) belonging to the southern Atlantic clade of the AT <italic>Salmo trutta</italic>
mtDNA lineage (<italic>sensu</italic>
Bernatchez). The prehistoric occurrence of this latter haplotype in the water courses of the Italian peninsula has been detected for the first time in this study. Finally, we observed a correspondence between frequency of trout remains and variation in haplotype diversity that we related with ecological and demographic changes resulting from a period of rapid cooling known as the Younger Dryas.</p>
</abstract>
<funding-group><funding-statement>This work was financed by: 1) Università Politecnica delle Marche (grant number 2014/472 “Divergenza genetica e speciazione in vertebrati ectotermi” awarded to Vincenzo Caputo Barucchi) <ext-link ext-link-type="uri" xlink:href="http://www.univpm.it/Entra/Engine/RAServePG.php/P/250010010603/T/Universita-Politecnica-delle-Marche">http://www.univpm.it/Entra/Engine/RAServePG.php/P/250010010603/T/Universita-Politecnica-delle-Marche</ext-link>
; 2) Università Politecnica delle Marche grant number 2015/342 "Aspetti dell'evoluzione del genoma in Vertebrati ectotermi (Pesci ossei, Rettili squamati)" awarded to Massimo Giovannotti (Ricerca scientifica d'ateneo 2015; and 3) Prog n. 85 RFO2014 "SAPROPEL AND THE MEDITERRANEAN CLIMATE" awarded to Alessandra Negri.</funding-statement>
</funding-group>
<counts><fig-count count="5"></fig-count>
<table-count count="4"></table-count>
<page-count count="15"></page-count>
</counts>
<custom-meta-group><custom-meta id="data-availability"><meta-name>Data Availability</meta-name>
<meta-value>All relevant data are within the paper and its Supporting Information files.</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
<notes><title>Data Availability</title>
<p>All relevant data are within the paper and its Supporting Information files.</p>
</notes>
</front>
</pmc>
<affiliations><list><country><li>Italie</li>
</country>
</list>
<tree><country name="Italie"><noRegion><name sortKey="Splendiani, Andrea" sort="Splendiani, Andrea" uniqKey="Splendiani A" first="Andrea" last="Splendiani">Andrea Splendiani</name>
</noRegion>
<name sortKey="Caputo Barucchi, Vincenzo" sort="Caputo Barucchi, Vincenzo" uniqKey="Caputo Barucchi V" first="Vincenzo" last="Caputo Barucchi">Vincenzo Caputo Barucchi</name>
<name sortKey="Caputo Barucchi, Vincenzo" sort="Caputo Barucchi, Vincenzo" uniqKey="Caputo Barucchi V" first="Vincenzo" last="Caputo Barucchi">Vincenzo Caputo Barucchi</name>
<name sortKey="Fioravanti, Tatiana" sort="Fioravanti, Tatiana" uniqKey="Fioravanti T" first="Tatiana" last="Fioravanti">Tatiana Fioravanti</name>
<name sortKey="Giovannotti, Massimo" sort="Giovannotti, Massimo" uniqKey="Giovannotti M" first="Massimo" last="Giovannotti">Massimo Giovannotti</name>
<name sortKey="Lorenzoni, Massimo" sort="Lorenzoni, Massimo" uniqKey="Lorenzoni M" first="Massimo" last="Lorenzoni">Massimo Lorenzoni</name>
<name sortKey="Negri, Alessandra" sort="Negri, Alessandra" uniqKey="Negri A" first="Alessandra" last="Negri">Alessandra Negri</name>
<name sortKey="Nisi Cerioni, Paola" sort="Nisi Cerioni, Paola" uniqKey="Nisi Cerioni P" first="Paola" last="Nisi Cerioni">Paola Nisi Cerioni</name>
<name sortKey="Olivieri, Luigi" sort="Olivieri, Luigi" uniqKey="Olivieri L" first="Luigi" last="Olivieri">Luigi Olivieri</name>
<name sortKey="Ruggeri, Paolo" sort="Ruggeri, Paolo" uniqKey="Ruggeri P" first="Paolo" last="Ruggeri">Paolo Ruggeri</name>
</country>
</tree>
</affiliations>
</record>
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