Revised phylogenetic relationships among herpesviruses isolated from sturgeons.
Identifieur interne : 000263 ( Ncbi/Curation ); précédent : 000262; suivant : 000264Revised phylogenetic relationships among herpesviruses isolated from sturgeons.
Auteurs : Tomofumi Kurobe [États-Unis] ; Garry O. Kelley ; Thomas B. Waltzek ; Ronald P. HedrickSource :
- Journal of aquatic animal health [ 0899-7659 ] ; 2008.
English descriptors
- KwdEn :
- Amphibians (virology), Animals, Cell Line, DNA-Directed DNA Polymerase (genetics), Endodeoxyribonucleases (genetics), Fish Diseases (virology), Fishes (virology), Herpesviridae (classification), Herpesviridae (enzymology), Herpesviridae (genetics), Herpesviridae (isolation & purification), Phylogeny, Viral Proteins (genetics).
- MESH :
- chemical , genetics : DNA-Directed DNA Polymerase, Endodeoxyribonucleases, Viral Proteins.
- classification : Herpesviridae.
- enzymology : Herpesviridae.
- genetics : Herpesviridae.
- isolation & purification : Herpesviridae.
- virology : Amphibians, Fish Diseases, Fishes.
- Animals, Cell Line, Phylogeny.
Abstract
Initial phylogenetic comparisons based on a region of the DNA polymerase of seven herpes-like viruses found in sturgeons in North America and Europe indicated the presence of three distinct clades. A revised phylogenetic analysis of the same viruses, based on corrected DNA polymerase sequences and newly obtained sequence data from the putative ATP subunit of the terminase gene, indicate only two clades. These two clades correspond to the historical designations given to these herpes-like viruses from white sturgeon Acipenser transmontanus: white sturgeon herpesvirus type 1 (WSHV-1) and type 2 (WSHV-2). The identification of putative terminase gene sequences for all seven herpes-like viruses from sturgeons confirms their affinity with the family Herpesviridae (because this gene is unique to herpesviruses) and more distantly with T4-like bacteriophages. The two clades of sturgeon herpesviruses are therefore appropriately designated as Acipenserid herpesviruses 1 and 2, which correspond to the previous common names of white sturgeon herpesvirus types 1 and 2.
DOI: 10.1577/H07-028.1
PubMed: 18783130
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pubmed:18783130Le document en format XML
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Kelley</name></author><author><name sortKey="Waltzek, Thomas B" sort="Waltzek, Thomas B" uniqKey="Waltzek T" first="Thomas B" last="Waltzek">Thomas B. Waltzek</name></author><author><name sortKey="Hedrick, Ronald P" sort="Hedrick, Ronald P" uniqKey="Hedrick R" first="Ronald P" last="Hedrick">Ronald P. 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Kelley</name></author><author><name sortKey="Waltzek, Thomas B" sort="Waltzek, Thomas B" uniqKey="Waltzek T" first="Thomas B" last="Waltzek">Thomas B. Waltzek</name></author><author><name sortKey="Hedrick, Ronald P" sort="Hedrick, Ronald P" uniqKey="Hedrick R" first="Ronald P" last="Hedrick">Ronald P. Hedrick</name></author></analytic><series><title level="j">Journal of aquatic animal health</title><idno type="ISSN">0899-7659</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amphibians (virology)</term><term>Animals</term><term>Cell Line</term><term>DNA-Directed DNA Polymerase (genetics)</term><term>Endodeoxyribonucleases (genetics)</term><term>Fish Diseases (virology)</term><term>Fishes (virology)</term><term>Herpesviridae (classification)</term><term>Herpesviridae (enzymology)</term><term>Herpesviridae (genetics)</term><term>Herpesviridae (isolation & purification)</term><term>Phylogeny</term><term>Viral Proteins (genetics)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA-Directed DNA Polymerase</term><term>Endodeoxyribonucleases</term><term>Viral Proteins</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Herpesviridae</term></keywords><keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Herpesviridae</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Herpesviridae</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Herpesviridae</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Amphibians</term><term>Fish Diseases</term><term>Fishes</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Cell Line</term><term>Phylogeny</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Initial phylogenetic comparisons based on a region of the DNA polymerase of seven herpes-like viruses found in sturgeons in North America and Europe indicated the presence of three distinct clades. A revised phylogenetic analysis of the same viruses, based on corrected DNA polymerase sequences and newly obtained sequence data from the putative ATP subunit of the terminase gene, indicate only two clades. These two clades correspond to the historical designations given to these herpes-like viruses from white sturgeon Acipenser transmontanus: white sturgeon herpesvirus type 1 (WSHV-1) and type 2 (WSHV-2). The identification of putative terminase gene sequences for all seven herpes-like viruses from sturgeons confirms their affinity with the family Herpesviridae (because this gene is unique to herpesviruses) and more distantly with T4-like bacteriophages. The two clades of sturgeon herpesviruses are therefore appropriately designated as Acipenserid herpesviruses 1 and 2, which correspond to the previous common names of white sturgeon herpesvirus types 1 and 2.</div></front></TEI></record>Pour manipuler ce document sous Unix (Dilib)
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