Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.
Identifieur interne : 000407 ( Main/Corpus ); précédent : 000406; suivant : 000408Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.
Auteurs : Norihiro Futamura ; Naoki Tani ; Yoshihiko Tsumura ; Nobuyoshi Nakajima ; Masahiko Sakaguchi ; Kenji ShinoharaSource :
- Tree physiology [ 0829-318X ] ; 2006.
English descriptors
- KwdEn :
- Abscisic Acid (pharmacology), Amino Acid Sequence (MeSH), Antigens, Plant (genetics), Arachidonic Acid (pharmacology), Chromosome Mapping (MeSH), Cryptomeria (genetics), DNA, Complementary (isolation & purification), Gene Expression (drug effects), Gene Expression (radiation effects), Gene Expression Regulation (MeSH), Genetic Linkage (MeSH), Genome, Plant (MeSH), Molecular Sequence Data (MeSH), Organophosphorus Compounds (pharmacology), Plant Growth Regulators (pharmacology), Plant Growth Regulators (physiology), Plant Proteins (genetics), Pollen (metabolism), RNA, Messenger (metabolism), Sodium Chloride (pharmacology), Ultraviolet Rays (MeSH).
- MESH :
- chemical , genetics : Antigens, Plant, Plant Proteins.
- chemical , isolation & purification : DNA, Complementary.
- chemical , metabolism : RNA, Messenger.
- chemical , pharmacology : Abscisic Acid, Arachidonic Acid, Organophosphorus Compounds, Plant Growth Regulators, Sodium Chloride.
- drug effects : Gene Expression.
- genetics : Cryptomeria.
- metabolism : Pollen.
- chemical , physiology : Plant Growth Regulators.
- radiation effects : Gene Expression.
- Amino Acid Sequence, Chromosome Mapping, Gene Expression Regulation, Genetic Linkage, Genome, Plant, Molecular Sequence Data, Ultraviolet Rays.
Abstract
Thaumatin-like proteins (TLPs) are induced by a variety of phytopathogens in many plants and several TLPs are allergenic. Previously, we isolated three TLP-encoding cDNAs (Cry j 3.1, Cry j 3.2 and Cry j 3.3) from a cDNA library derived from the pollen of Cryptomeria japonica D. Don. Here, we describe three new TLP cDNAs (Cry j 3.4, Cry j 3.5 and Cry j 3.6). We compared the sequences, the genetic map location and the expression patterns of the Cry j 3 genes. The amino acid sequence predicted from Cry j 3.5 exhibits only limited similarity to those predicted from the other Cry j 3 genes. Linkage analysis showed that the Cry j 3.1 to Cry j 3.4 genes are located in the same linkage group, but Cry j 3.5 is located in a different group. Organ-specificity and induction by stresses and plant hormones differed among the Cry j 3 mRNAs. In pollen grains, the Cry j 3.5 mRNA expression level was higher than that of the other Cry j 3 genes. Exposure to UV-B and salt stress induced expression of Cry j 3.1. The ethylene-releasing compound ethephon strongly induced expression of Cry j 3.4. Salt stress and salicylic acid also induced expression of Cry j 3.4. Abscisic acid weakly induced expression of Cry j 3.5. Arachidonic acid strongly induced expression of Cry j 3.4 and Cry j 3.6, and weakly induced that of Cry j 3.3, whereas expression of Cry j 3.1 and Cry j 3.5 was unaffected. These results suggest that the roles of TLPs and the cascades that regulate their expression differ among the members of the TLP family in C. japonica.
DOI: 10.1093/treephys/26.1.51
PubMed: 16203714
Links to Exploration step
pubmed:16203714Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.</title><author><name sortKey="Futamura, Norihiro" sort="Futamura, Norihiro" uniqKey="Futamura N" first="Norihiro" last="Futamura">Norihiro Futamura</name><affiliation><nlm:affiliation>Department of Molecular and Cell Biology, Forestry and Forest Products Research Institute, Ibaraki, Japan. futa@ffpri.affrc.go.jp</nlm:affiliation></affiliation></author><author><name sortKey="Tani, Naoki" sort="Tani, Naoki" uniqKey="Tani N" first="Naoki" last="Tani">Naoki Tani</name></author><author><name sortKey="Tsumura, Yoshihiko" sort="Tsumura, Yoshihiko" uniqKey="Tsumura Y" first="Yoshihiko" last="Tsumura">Yoshihiko Tsumura</name></author><author><name sortKey="Nakajima, Nobuyoshi" sort="Nakajima, Nobuyoshi" uniqKey="Nakajima N" first="Nobuyoshi" last="Nakajima">Nobuyoshi Nakajima</name></author><author><name sortKey="Sakaguchi, Masahiko" sort="Sakaguchi, Masahiko" uniqKey="Sakaguchi M" first="Masahiko" last="Sakaguchi">Masahiko Sakaguchi</name></author><author><name sortKey="Shinohara, Kenji" sort="Shinohara, Kenji" uniqKey="Shinohara K" first="Kenji" last="Shinohara">Kenji Shinohara</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2006">2006</date><idno type="RBID">pubmed:16203714</idno><idno type="pmid">16203714</idno><idno type="doi">10.1093/treephys/26.1.51</idno><idno type="wicri:Area/Main/Corpus">000407</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000407</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.</title><author><name sortKey="Futamura, Norihiro" sort="Futamura, Norihiro" uniqKey="Futamura N" first="Norihiro" last="Futamura">Norihiro Futamura</name><affiliation><nlm:affiliation>Department of Molecular and Cell Biology, Forestry and Forest Products Research Institute, Ibaraki, Japan. futa@ffpri.affrc.go.jp</nlm:affiliation></affiliation></author><author><name sortKey="Tani, Naoki" sort="Tani, Naoki" uniqKey="Tani N" first="Naoki" last="Tani">Naoki Tani</name></author><author><name sortKey="Tsumura, Yoshihiko" sort="Tsumura, Yoshihiko" uniqKey="Tsumura Y" first="Yoshihiko" last="Tsumura">Yoshihiko Tsumura</name></author><author><name sortKey="Nakajima, Nobuyoshi" sort="Nakajima, Nobuyoshi" uniqKey="Nakajima N" first="Nobuyoshi" last="Nakajima">Nobuyoshi Nakajima</name></author><author><name sortKey="Sakaguchi, Masahiko" sort="Sakaguchi, Masahiko" uniqKey="Sakaguchi M" first="Masahiko" last="Sakaguchi">Masahiko Sakaguchi</name></author><author><name sortKey="Shinohara, Kenji" sort="Shinohara, Kenji" uniqKey="Shinohara K" first="Kenji" last="Shinohara">Kenji Shinohara</name></author></analytic><series><title level="j">Tree physiology</title><idno type="ISSN">0829-318X</idno><imprint><date when="2006" type="published">2006</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Abscisic Acid (pharmacology)</term><term>Amino Acid Sequence (MeSH)</term><term>Antigens, Plant (genetics)</term><term>Arachidonic Acid (pharmacology)</term><term>Chromosome Mapping (MeSH)</term><term>Cryptomeria (genetics)</term><term>DNA, Complementary (isolation & purification)</term><term>Gene Expression (drug effects)</term><term>Gene Expression (radiation effects)</term><term>Gene Expression Regulation (MeSH)</term><term>Genetic Linkage (MeSH)</term><term>Genome, Plant (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Organophosphorus Compounds (pharmacology)</term><term>Plant Growth Regulators (pharmacology)</term><term>Plant Growth Regulators (physiology)</term><term>Plant Proteins (genetics)</term><term>Pollen (metabolism)</term><term>RNA, Messenger (metabolism)</term><term>Sodium Chloride (pharmacology)</term><term>Ultraviolet Rays (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Antigens, Plant</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en"><term>DNA, Complementary</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>RNA, Messenger</term></keywords><keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en"><term>Abscisic Acid</term><term>Arachidonic Acid</term><term>Organophosphorus Compounds</term><term>Plant Growth Regulators</term><term>Sodium Chloride</term></keywords><keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Gene Expression</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Cryptomeria</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Pollen</term></keywords><keywords scheme="MESH" type="chemical" qualifier="physiology" xml:lang="en"><term>Plant Growth Regulators</term></keywords><keywords scheme="MESH" qualifier="radiation effects" xml:lang="en"><term>Gene Expression</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Chromosome Mapping</term><term>Gene Expression Regulation</term><term>Genetic Linkage</term><term>Genome, Plant</term><term>Molecular Sequence Data</term><term>Ultraviolet Rays</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Thaumatin-like proteins (TLPs) are induced by a variety of phytopathogens in many plants and several TLPs are allergenic. Previously, we isolated three TLP-encoding cDNAs (Cry j 3.1, Cry j 3.2 and Cry j 3.3) from a cDNA library derived from the pollen of Cryptomeria japonica D. Don. Here, we describe three new TLP cDNAs (Cry j 3.4, Cry j 3.5 and Cry j 3.6). We compared the sequences, the genetic map location and the expression patterns of the Cry j 3 genes. The amino acid sequence predicted from Cry j 3.5 exhibits only limited similarity to those predicted from the other Cry j 3 genes. Linkage analysis showed that the Cry j 3.1 to Cry j 3.4 genes are located in the same linkage group, but Cry j 3.5 is located in a different group. Organ-specificity and induction by stresses and plant hormones differed among the Cry j 3 mRNAs. In pollen grains, the Cry j 3.5 mRNA expression level was higher than that of the other Cry j 3 genes. Exposure to UV-B and salt stress induced expression of Cry j 3.1. The ethylene-releasing compound ethephon strongly induced expression of Cry j 3.4. Salt stress and salicylic acid also induced expression of Cry j 3.4. Abscisic acid weakly induced expression of Cry j 3.5. Arachidonic acid strongly induced expression of Cry j 3.4 and Cry j 3.6, and weakly induced that of Cry j 3.3, whereas expression of Cry j 3.1 and Cry j 3.5 was unaffected. These results suggest that the roles of TLPs and the cascades that regulate their expression differ among the members of the TLP family in C. japonica.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16203714</PMID><DateCompleted><Year>2007</Year><Month>04</Month><Day>24</Day></DateCompleted><DateRevised><Year>2019</Year><Month>05</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0829-318X</ISSN><JournalIssue CitedMedium="Print"><Volume>26</Volume><Issue>1</Issue><PubDate><Year>2006</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Tree physiology</Title><ISOAbbreviation>Tree Physiol</ISOAbbreviation></Journal><ArticleTitle>Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.</ArticleTitle><Pagination><MedlinePgn>51-62</MedlinePgn></Pagination><Abstract><AbstractText>Thaumatin-like proteins (TLPs) are induced by a variety of phytopathogens in many plants and several TLPs are allergenic. Previously, we isolated three TLP-encoding cDNAs (Cry j 3.1, Cry j 3.2 and Cry j 3.3) from a cDNA library derived from the pollen of Cryptomeria japonica D. Don. Here, we describe three new TLP cDNAs (Cry j 3.4, Cry j 3.5 and Cry j 3.6). We compared the sequences, the genetic map location and the expression patterns of the Cry j 3 genes. The amino acid sequence predicted from Cry j 3.5 exhibits only limited similarity to those predicted from the other Cry j 3 genes. Linkage analysis showed that the Cry j 3.1 to Cry j 3.4 genes are located in the same linkage group, but Cry j 3.5 is located in a different group. Organ-specificity and induction by stresses and plant hormones differed among the Cry j 3 mRNAs. In pollen grains, the Cry j 3.5 mRNA expression level was higher than that of the other Cry j 3 genes. Exposure to UV-B and salt stress induced expression of Cry j 3.1. The ethylene-releasing compound ethephon strongly induced expression of Cry j 3.4. Salt stress and salicylic acid also induced expression of Cry j 3.4. Abscisic acid weakly induced expression of Cry j 3.5. Arachidonic acid strongly induced expression of Cry j 3.4 and Cry j 3.6, and weakly induced that of Cry j 3.3, whereas expression of Cry j 3.1 and Cry j 3.5 was unaffected. These results suggest that the roles of TLPs and the cascades that regulate their expression differ among the members of the TLP family in C. japonica.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Futamura</LastName><ForeName>Norihiro</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Department of Molecular and Cell Biology, Forestry and Forest Products Research Institute, Ibaraki, Japan. futa@ffpri.affrc.go.jp</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tani</LastName><ForeName>Naoki</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Tsumura</LastName><ForeName>Yoshihiko</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Nakajima</LastName><ForeName>Nobuyoshi</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Sakaguchi</LastName><ForeName>Masahiko</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Shinohara</LastName><ForeName>Kenji</ForeName><Initials>K</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Canada</Country><MedlineTA>Tree Physiol</MedlineTA><NlmUniqueID>100955338</NlmUniqueID><ISSNLinking>0829-318X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D052179">Antigens, Plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C518869">Cry j 3 allergen, Cryptomeria japonica</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018076">DNA, Complementary</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D009943">Organophosphorus Compounds</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010937">Plant Growth Regulators</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance></Chemical><Chemical><RegistryNumber>27YG812J1I</RegistryNumber><NameOfSubstance UI="D016718">Arachidonic Acid</NameOfSubstance></Chemical><Chemical><RegistryNumber>451W47IQ8X</RegistryNumber><NameOfSubstance UI="D012965">Sodium Chloride</NameOfSubstance></Chemical><Chemical><RegistryNumber>53850-34-3</RegistryNumber><NameOfSubstance UI="C003427">thaumatin protein, plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>72S9A8J5GW</RegistryNumber><NameOfSubstance UI="D000040">Abscisic Acid</NameOfSubstance></Chemical><Chemical><RegistryNumber>XU5R5VQ87S</RegistryNumber><NameOfSubstance UI="C005073">ethephon</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000040" MajorTopicYN="N">Abscisic Acid</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D052179" MajorTopicYN="N">Antigens, Plant</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D016718" MajorTopicYN="N">Arachidonic Acid</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002874" MajorTopicYN="N">Chromosome Mapping</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032485" MajorTopicYN="N">Cryptomeria</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018076" MajorTopicYN="N">DNA, Complementary</DescriptorName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015870" MajorTopicYN="N">Gene Expression</DescriptorName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000528" MajorTopicYN="N">radiation effects</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005786" MajorTopicYN="N">Gene Expression Regulation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008040" MajorTopicYN="N">Genetic Linkage</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009943" MajorTopicYN="N">Organophosphorus Compounds</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010937" MajorTopicYN="N">Plant Growth Regulators</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011058" MajorTopicYN="N">Pollen</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012965" MajorTopicYN="N">Sodium Chloride</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014466" MajorTopicYN="N">Ultraviolet Rays</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2005</Year><Month>10</Month><Day>6</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2007</Year><Month>4</Month><Day>25</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2005</Year><Month>10</Month><Day>6</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">16203714</ArticleId><ArticleId IdType="doi">10.1093/treephys/26.1.51</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/ThaumatinV1/Data/Main/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000407 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd -nk 000407 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= ThaumatinV1
|flux= Main
|étape= Corpus
|type= RBID
|clé= pubmed:16203714
|texte= Characterization of genes for novel thaumatin-like proteins in Cryptomeria japonica.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Corpus/RBID.i -Sk "pubmed:16203714" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a ThaumatinV1
| This area was generated with Dilib version V0.6.37. |  |