Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.
Identifieur interne : 000185 ( Main/Corpus ); précédent : 000184; suivant : 000186Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.
Auteurs : Klára Kosová ; Pavel Vítámvás ; Sébastien Planchon ; Jenny Renaut ; Radomíra Vanková ; Ilja Tom PrášilSource :
- Journal of proteome research [ 1535-3907 ] ; 2013.
English descriptors
- KwdEn :
- Adaptation, Biological (genetics), Adaptation, Biological (physiology), Analysis of Variance (MeSH), Cluster Analysis (MeSH), Cold Temperature (MeSH), Computational Biology (MeSH), Densitometry (MeSH), Electrophoresis, Gel, Two-Dimensional (MeSH), Gene Expression Regulation, Plant (genetics), Gene Expression Regulation, Plant (physiology), Plant Proteins (genetics), Plant Proteins (metabolism), Principal Component Analysis (MeSH), Proteomics (MeSH), Species Specificity (MeSH), Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization (MeSH), Stress, Physiological (genetics), Triticum (genetics), Triticum (growth & development), Triticum (metabolism).
- MESH :
- chemical , genetics : Plant Proteins.
- genetics : Adaptation, Biological, Gene Expression Regulation, Plant, Stress, Physiological, Triticum.
- growth & development : Triticum.
- chemical , metabolism : Plant Proteins, Triticum.
- physiology : Adaptation, Biological, Gene Expression Regulation, Plant.
- Analysis of Variance, Cluster Analysis, Cold Temperature, Computational Biology, Densitometry, Electrophoresis, Gel, Two-Dimensional, Principal Component Analysis, Proteomics, Species Specificity, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization.
Abstract
A proteomic response to cold treatment (4 °C) has been studied in crowns of a frost-tolerant winter wheat cultivar Samanta and a frost-sensitive spring wheat cultivar Sandra after short-term (3 days) and long-term (21 days) cold treatments. Densitometric analysis of 2-D differential in gel electrophoresis (2D-DIGE) gels has resulted in the detection of 386 differentially abundant protein spots, which reveal at least a two-fold change between experimental variants. Of these, 58 representative protein spots have been selected for MALDI-TOF/TOF identification, and 36 proteins have been identified. The identified proteins with an increased relative abundance upon cold in both growth habits include proteins involved in carbohydrate catabolism (glycolysis enzymes), redox metabolism (thioredoxin-dependent peroxidase), chaperones, as well as defense-related proteins (protein revealing similarity to thaumatin). Proteins exhibiting a cold-induced increase in the winter cultivar include proteins involved in regulation of stress response and development (germin E, lectin VER2), while proteins showing a cold-induced increase in the spring cultivar include proteins involved in restoration of cell division and plant growth (eIF5A2, glycine-rich RNA-binding protein, adenine phosphoribosyltransferase). These results provide new insights into cold acclimation in spring and winter wheat at the proteome level and enrich our previous work aimed at phytohormone dynamics in the same plant material.
DOI: 10.1021/pr400600g
PubMed: 24047233
Links to Exploration step
pubmed:24047233Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.</title><author><name sortKey="Kosova, Klara" sort="Kosova, Klara" uniqKey="Kosova K" first="Klára" last="Kosová">Klára Kosová</name><affiliation><nlm:affiliation>Department of Genetics and Plant Breeding, Crop Research Institute , Drnovská 507, 16106 Prague 6, The Czech Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Vitamvas, Pavel" sort="Vitamvas, Pavel" uniqKey="Vitamvas P" first="Pavel" last="Vítámvás">Pavel Vítámvás</name></author><author><name sortKey="Planchon, Sebastien" sort="Planchon, Sebastien" uniqKey="Planchon S" first="Sébastien" last="Planchon">Sébastien Planchon</name></author><author><name sortKey="Renaut, Jenny" sort="Renaut, Jenny" uniqKey="Renaut J" first="Jenny" last="Renaut">Jenny Renaut</name></author><author><name sortKey="Vankova, Radomira" sort="Vankova, Radomira" uniqKey="Vankova R" first="Radomíra" last="Vanková">Radomíra Vanková</name></author><author><name sortKey="Prasil, Ilja Tom" sort="Prasil, Ilja Tom" uniqKey="Prasil I" first="Ilja Tom" last="Prášil">Ilja Tom Prášil</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2013">2013</date><idno type="RBID">pubmed:24047233</idno><idno type="pmid">24047233</idno><idno type="doi">10.1021/pr400600g</idno><idno type="wicri:Area/Main/Corpus">000185</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000185</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.</title><author><name sortKey="Kosova, Klara" sort="Kosova, Klara" uniqKey="Kosova K" first="Klára" last="Kosová">Klára Kosová</name><affiliation><nlm:affiliation>Department of Genetics and Plant Breeding, Crop Research Institute , Drnovská 507, 16106 Prague 6, The Czech Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Vitamvas, Pavel" sort="Vitamvas, Pavel" uniqKey="Vitamvas P" first="Pavel" last="Vítámvás">Pavel Vítámvás</name></author><author><name sortKey="Planchon, Sebastien" sort="Planchon, Sebastien" uniqKey="Planchon S" first="Sébastien" last="Planchon">Sébastien Planchon</name></author><author><name sortKey="Renaut, Jenny" sort="Renaut, Jenny" uniqKey="Renaut J" first="Jenny" last="Renaut">Jenny Renaut</name></author><author><name sortKey="Vankova, Radomira" sort="Vankova, Radomira" uniqKey="Vankova R" first="Radomíra" last="Vanková">Radomíra Vanková</name></author><author><name sortKey="Prasil, Ilja Tom" sort="Prasil, Ilja Tom" uniqKey="Prasil I" first="Ilja Tom" last="Prášil">Ilja Tom Prášil</name></author></analytic><series><title level="j">Journal of proteome research</title><idno type="eISSN">1535-3907</idno><imprint><date when="2013" type="published">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adaptation, Biological (genetics)</term><term>Adaptation, Biological (physiology)</term><term>Analysis of Variance (MeSH)</term><term>Cluster Analysis (MeSH)</term><term>Cold Temperature (MeSH)</term><term>Computational Biology (MeSH)</term><term>Densitometry (MeSH)</term><term>Electrophoresis, Gel, Two-Dimensional (MeSH)</term><term>Gene Expression Regulation, Plant (genetics)</term><term>Gene Expression Regulation, Plant (physiology)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Principal Component Analysis (MeSH)</term><term>Proteomics (MeSH)</term><term>Species Specificity (MeSH)</term><term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization (MeSH)</term><term>Stress, Physiological (genetics)</term><term>Triticum (genetics)</term><term>Triticum (growth & development)</term><term>Triticum (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Adaptation, Biological</term><term>Gene Expression Regulation, Plant</term><term>Stress, Physiological</term><term>Triticum</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Triticum</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Plant Proteins</term><term>Triticum</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Adaptation, Biological</term><term>Gene Expression Regulation, Plant</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Analysis of Variance</term><term>Cluster Analysis</term><term>Cold Temperature</term><term>Computational Biology</term><term>Densitometry</term><term>Electrophoresis, Gel, Two-Dimensional</term><term>Principal Component Analysis</term><term>Proteomics</term><term>Species Specificity</term><term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A proteomic response to cold treatment (4 °C) has been studied in crowns of a frost-tolerant winter wheat cultivar Samanta and a frost-sensitive spring wheat cultivar Sandra after short-term (3 days) and long-term (21 days) cold treatments. Densitometric analysis of 2-D differential in gel electrophoresis (2D-DIGE) gels has resulted in the detection of 386 differentially abundant protein spots, which reveal at least a two-fold change between experimental variants. Of these, 58 representative protein spots have been selected for MALDI-TOF/TOF identification, and 36 proteins have been identified. The identified proteins with an increased relative abundance upon cold in both growth habits include proteins involved in carbohydrate catabolism (glycolysis enzymes), redox metabolism (thioredoxin-dependent peroxidase), chaperones, as well as defense-related proteins (protein revealing similarity to thaumatin). Proteins exhibiting a cold-induced increase in the winter cultivar include proteins involved in regulation of stress response and development (germin E, lectin VER2), while proteins showing a cold-induced increase in the spring cultivar include proteins involved in restoration of cell division and plant growth (eIF5A2, glycine-rich RNA-binding protein, adenine phosphoribosyltransferase). These results provide new insights into cold acclimation in spring and winter wheat at the proteome level and enrich our previous work aimed at phytohormone dynamics in the same plant material. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24047233</PMID><DateCompleted><Year>2014</Year><Month>06</Month><Day>09</Day></DateCompleted><DateRevised><Year>2013</Year><Month>11</Month><Day>01</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1535-3907</ISSN><JournalIssue CitedMedium="Internet"><Volume>12</Volume><Issue>11</Issue><PubDate><Year>2013</Year><Month>Nov</Month><Day>01</Day></PubDate></JournalIssue><Title>Journal of proteome research</Title><ISOAbbreviation>J Proteome Res</ISOAbbreviation></Journal><ArticleTitle>Proteome analysis of cold response in spring and winter wheat (Triticum aestivum) crowns reveals similarities in stress adaptation and differences in regulatory processes between the growth habits.</ArticleTitle><Pagination><MedlinePgn>4830-45</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1021/pr400600g</ELocationID><Abstract><AbstractText>A proteomic response to cold treatment (4 °C) has been studied in crowns of a frost-tolerant winter wheat cultivar Samanta and a frost-sensitive spring wheat cultivar Sandra after short-term (3 days) and long-term (21 days) cold treatments. Densitometric analysis of 2-D differential in gel electrophoresis (2D-DIGE) gels has resulted in the detection of 386 differentially abundant protein spots, which reveal at least a two-fold change between experimental variants. Of these, 58 representative protein spots have been selected for MALDI-TOF/TOF identification, and 36 proteins have been identified. The identified proteins with an increased relative abundance upon cold in both growth habits include proteins involved in carbohydrate catabolism (glycolysis enzymes), redox metabolism (thioredoxin-dependent peroxidase), chaperones, as well as defense-related proteins (protein revealing similarity to thaumatin). Proteins exhibiting a cold-induced increase in the winter cultivar include proteins involved in regulation of stress response and development (germin E, lectin VER2), while proteins showing a cold-induced increase in the spring cultivar include proteins involved in restoration of cell division and plant growth (eIF5A2, glycine-rich RNA-binding protein, adenine phosphoribosyltransferase). These results provide new insights into cold acclimation in spring and winter wheat at the proteome level and enrich our previous work aimed at phytohormone dynamics in the same plant material. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kosová</LastName><ForeName>Klára</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Genetics and Plant Breeding, Crop Research Institute , Drnovská 507, 16106 Prague 6, The Czech Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vítámvás</LastName><ForeName>Pavel</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Planchon</LastName><ForeName>Sébastien</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Renaut</LastName><ForeName>Jenny</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Vanková</LastName><ForeName>Radomíra</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Prášil</LastName><ForeName>Ilja Tom</ForeName><Initials>IT</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2013</Year><Month>09</Month><Day>18</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>J Proteome Res</MedlineTA><NlmUniqueID>101128775</NlmUniqueID><ISSNLinking>1535-3893</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000220" MajorTopicYN="N">Adaptation, Biological</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000704" MajorTopicYN="N">Analysis of Variance</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003080" MajorTopicYN="Y">Cold Temperature</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019295" MajorTopicYN="N">Computational Biology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003720" MajorTopicYN="N">Densitometry</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015180" MajorTopicYN="N">Electrophoresis, Gel, Two-Dimensional</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D025341" MajorTopicYN="N">Principal Component Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D040901" MajorTopicYN="N">Proteomics</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019032" MajorTopicYN="N">Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013312" MajorTopicYN="N">Stress, Physiological</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014908" MajorTopicYN="N">Triticum</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2013</Year><Month>9</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2013</Year><Month>9</Month><Day>21</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2014</Year><Month>6</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24047233</ArticleId><ArticleId IdType="doi">10.1021/pr400600g</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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