| Ident. | Authors (with country if any) | Title |
|---|
| 000052 (2020) |
Jiahong Xu [République populaire de Chine] ; Yao Zheng [République populaire de Chine] ; Shouqin Pu [République populaire de Chine] ; Xiujie Zhang [République populaire de Chine] ; Zhihao Li [République populaire de Chine] ; Jinhui Chen [République populaire de Chine] | Third-generation sequencing found LncRNA associated with heat shock protein response to heat stress in Populus qiongdaoensis seedlings. |
| 000373 (2020) |
Maria L. Irigoyen [États-Unis] ; Danielle C. Garceau [États-Unis] ; Adriana Bohorquez-Chaux [Colombie] ; Luis Augusto Becerra Lopez-Lavalle [Colombie] ; Laura Perez-Fons [Royaume-Uni] ; Paul D. Fraser [Royaume-Uni] ; Linda L. Walling [États-Unis] | Genome-wide analyses of cassava Pathogenesis-related (PR) gene families reveal core transcriptome responses to whitefly infestation, salicylic acid and jasmonic acid. |
| 000384 (2020) |
Aurélien Chateigner [France] ; Marie-Claude Lesage-Descauses [France] ; Odile Rogier [France] ; Véronique Jorge [France] ; Jean-Charles Leplé [France] ; Véronique Brunaud [France] ; Christine Paysant-Le Roux [France] ; Ludivine Soubigou-Taconnat [France] ; Marie-Laure Martin-Magniette [France] ; Leopoldo Sanchez [France] ; Vincent Segura [France] | Gene expression predictions and networks in natural populations supports the omnigenic theory. |
| 000493 (2020) |
Yang Zhang [République populaire de Chine] ; Cong Liu [République populaire de Chine] ; He Cheng [République populaire de Chine] ; Shuanghui Tian [République populaire de Chine] ; Yingying Liu [République populaire de Chine] ; Shuang Wang [République populaire de Chine] ; Huaxin Zhang [République populaire de Chine] ; Muhammad Saqib [Pakistan] ; Hairong Wei [États-Unis] ; Zhigang Wei [République populaire de Chine] | DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems. |
| 000669 (2019) |
Chunpu Qu [République populaire de Chine] ; Hancheng Zhao [République populaire de Chine] ; Jinyuan Chen [République populaire de Chine] ; Zhuang Zuo [République populaire de Chine] ; Xue Sun [République populaire de Chine] ; Jiahuan Huang [République populaire de Chine] ; Chengjun Yang [République populaire de Chine] ; Xiuli Zhang [République populaire de Chine] ; Peng Zhang [République populaire de Chine] ; Xiankui Quan [République populaire de Chine] ; Zhiru Xu [République populaire de Chine] ; Guanjun Liu [République populaire de Chine] | The transcriptional events and their relationship to physiological changes during poplar seed germination and post-germination. |
| 000720 (2019) |
Marie Pégard [France] ; Odile Rogier [France] ; Aurélie Bérard [France] ; Patricia Faivre-Rampant [France] ; Marie-Christine Le Paslier [France] ; Catherine Bastien [France] ; Véronique Jorge [France] ; Leopoldo Sánchez [France] | Sequence imputation from low density single nucleotide polymorphism panel in a black poplar breeding population. |
| 000743 (2019) |
Niels A. Müller [Allemagne] ; Birgit Kersten [Allemagne] ; Matthias Fladung [Allemagne] ; Hilke Schroeder [Allemagne] | RNA-seq of eight different poplar clones reveals conserved up-regulation of gene expression in response to insect herbivory. |
| 000970 (2019) |
Fernando P. Guerra [États-Unis, Chili] ; Haktan Suren [États-Unis] ; Jason Holliday [États-Unis] ; James H. Richards [États-Unis] ; Oliver Fiehn [États-Unis] ; Randi Famula [États-Unis] ; Brian J. Stanton [États-Unis] ; Richard Shuren [États-Unis] ; Robert Sykes [États-Unis] ; Mark F. Davis [États-Unis] ; David B. Neale [États-Unis] | Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa. |
| 000976 (2019) |
Yong Huang [République populaire de Chine] ; Ling Jiang [République populaire de Chine] ; Bo-Yu Liu [République populaire de Chine] ; Cheng-Fang Tan [République populaire de Chine] ; Dong-Hong Chen [République populaire de Chine] ; Wen-Hui Shen [République populaire de Chine, France] ; Ying Ruan [République populaire de Chine] | Evolution and conservation of polycomb repressive complex 1 core components and putative associated factors in the green lineage. |
| 000C66 (2018) |
Sheng Zhu [République populaire de Chine] ; Meng Xu [République populaire de Chine] ; Haoran Wang [République populaire de Chine] ; Huixin Pan [République populaire de Chine] ; Guangping Wang [République populaire de Chine] ; Minren Huang [République populaire de Chine] | Study of spontaneous mutations in the transmission of poplar chloroplast genomes from mother to offspring. |
| 000E33 (2018) |
Shentong Tao [République populaire de Chine] ; Jiyan Wu [République populaire de Chine] ; Dan Yao [République populaire de Chine] ; Yuhua Chen [République populaire de Chine] ; Wenguo Yang [République populaire de Chine] ; Chunfa Tong [République populaire de Chine] | Identification of recombination events in outbred species with next-generation sequencing data. |
| 000F46 (2018) |
E. Jurak [Finlande, Pays-Bas] ; H. Suzuki [Canada] ; G. Van Erven [Pays-Bas] ; J A Gandier [Canada] ; P. Wong [Canada] ; K. Chan [Canada] ; C Y Ho [Canada] ; Y. Gong [Canada] ; E. Tillier [Canada] ; M-N Rosso [France] ; M A Kabel [Pays-Bas] ; S. Miyauchi [France] ; E R Master [Finlande, Canada] | Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce. |
| 001068 (2018) |
Odile Rogier [France] ; Aurélien Chateigner [France] ; Souhila Amanzougarene [France] ; Marie-Claude Lesage-Descauses [France] ; Sandrine Balzergue [France] ; Véronique Brunaud [France] ; José Caius [France] ; Ludivine Soubigou-Taconnat [France] ; Véronique Jorge [France] ; Vincent Segura [France] | Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra. |
| 001075 (2018) |
Ogonna Obudulu [Suède] ; Niklas M Hler [Suède, Norvège] ; Tomas Skotare [Suède] ; Joakim Bygdell [Suède] ; Ilka N. Abreu [Suède] ; Maria Ahnlund [Suède] ; Madhavi Latha Gandla [Suède] ; Anna Petterle [Suède] ; Thomas Moritz [Suède] ; Torgeir R. Hvidsten [Suède, Norvège] ; Leif J. Jönsson [Suède] ; Gunnar Wingsle [Suède] ; Johan Trygg [Suède] ; Hannele Tuominen [Suède] | A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees. |
| 001214 (2017) |
Y. Daguerre [France, Suède] ; E. Levati [Italie] ; J. Ruytinx [France, Belgique] ; E. Tisserant [France] ; E. Morin [France] ; A. Kohler [France] ; B. Montanini [Italie] ; S. Ottonello [Italie] ; A. Brun [France] ; C. Veneault-Fourrey [France] ; F. Martin [France] | Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor. |
| 001250 (2017) |
Lise Pomiès [France] ; Mélanie Decourteix [France] ; Jérôme Franchel [France] ; Bruno Moulia [France] ; Nathalie Leblanc-Fournier [France] | Poplar stem transcriptome is massively remodelled in response to single or repeated mechanical stimuli. |
| 001694 (2016) |
Ogonna Obudulu [Suède] ; Joakim Bygdell [Suède] ; Björn Sundberg [Suède] ; Thomas Moritz [Suède] ; Torgeir R. Hvidsten [Suède, Norvège] ; Johan Trygg [Suède] ; Gunnar Wingsle [Suède] | Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development. |
| 001773 (2016) |
Danlei Li [République populaire de Chine] ; Feng Wang [République populaire de Chine] ; Chao Wang [République populaire de Chine] ; Li Zou [République populaire de Chine] ; Zhiying Wang [République populaire de Chine] ; Qiaoli Chen [République populaire de Chine] ; Chunyang Niu [République populaire de Chine] ; Ruizhi Zhang [République populaire de Chine] ; Yaming Ling [République populaire de Chine] ; Bowen Wang [République populaire de Chine] | MicroRNA-mediated susceptible poplar gene expression regulation associated with the infection of virulent Melampsora larici-populina. |
| 001823 (2016) |
Xujun Ma [République populaire de Chine] ; Chao Zhang [République populaire de Chine] ; Bing Zhang [République populaire de Chine] ; Chuanping Yang [République populaire de Chine] ; Shujuan Li [République populaire de Chine] | Identification of genes regulated by histone acetylation during root development in Populus trichocarpa. |
| 001826 (2016) |
Huibin Han [République populaire de Chine] ; Guohua Zhang [République populaire de Chine] ; Mengyao Wu [République populaire de Chine] ; Guodong Wang [République populaire de Chine] | Identification and characterization of the Populus trichocarpa CLE family. |
| 001852 (2016) |
Yongil Yang [États-Unis] ; Jessy Labbé [États-Unis] ; Wellington Muchero [États-Unis] ; Xiaohan Yang [États-Unis] ; Sara S. Jawdy [États-Unis] ; Megan Kennedy [États-Unis] ; Jenifer Johnson [États-Unis] ; Avinash Sreedasyam [États-Unis] ; Jeremy Schmutz [États-Unis] ; Gerald A. Tuskan [États-Unis] ; Jin-Gui Chen [États-Unis] | Genome-wide analysis of lectin receptor-like kinases in Populus. |
| 001931 (2016) |
Mohaddeseh Mousavi [République populaire de Chine] ; Chunfa Tong [République populaire de Chine] ; Fenxiang Liu [République populaire de Chine] ; Shentong Tao [République populaire de Chine] ; Jiyan Wu [République populaire de Chine] ; Huogen Li [République populaire de Chine] ; Jisen Shi [République populaire de Chine] | De novo SNP discovery and genetic linkage mapping in poplar using restriction site associated DNA and whole-genome sequencing technologies. |
| 001959 (2016) |
Daniel Penselin [Allemagne] ; Martin Münsterkötter [Allemagne] ; Susanne Kirsten [Allemagne] ; Marius Felder [Allemagne] ; Stefan Taudien [Allemagne] ; Matthias Platzer [Allemagne] ; Kevin Ashelford [Royaume-Uni] ; Konrad H. Paskiewicz [Royaume-Uni] ; Richard J. Harrison [Royaume-Uni] ; David J. Hughes [Royaume-Uni] ; Thomas Wolf [Allemagne] ; Ekaterina Shelest [Allemagne] ; Jenny Graap [Allemagne] ; Jan Hoffmann [Allemagne] ; Claudia Wenzel [Allemagne, Suisse] ; Nadine Wöltje [Allemagne] ; Kevin M. King [Royaume-Uni] ; Bruce D L. Fitt [Royaume-Uni] ; Ulrich Güldener [Allemagne] ; Anna Avrova [Royaume-Uni] ; Wolfgang Knogge [Allemagne] | Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses. |
| 001A91 (2015) |
Jinhui Chen [République populaire de Chine] ; Beibei Chen [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine] | Transcript profiling of Populus tomentosa genes in normal, tension, and opposite wood by RNA-seq. |
| 001A96 (2015) |
Yazhen Ma [République populaire de Chine] ; Ting Xu [République populaire de Chine] ; Dongshi Wan [République populaire de Chine] ; Tao Ma [République populaire de Chine] ; Sheng Shi [République populaire de Chine] ; Jianquan Liu [République populaire de Chine] ; Quanjun Hu [République populaire de Chine] | The salinity tolerant poplar database (STPD): a comprehensive database for studying tree salt-tolerant adaption and poplar genomics. |
| 001B24 (2015) |
Ming-Cheng Luo [États-Unis] ; Frank M. You [Canada] ; Pingchuan Li [Canada] ; Ji-Rui Wang [États-Unis, République populaire de Chine] ; Tingting Zhu [États-Unis] ; Abhaya M. Dandekar [États-Unis] ; Charles A. Leslie [États-Unis] ; Mallikarjuna Aradhya [États-Unis] ; Patrick E. Mcguire [États-Unis] ; Jan Dvorak [États-Unis] | Synteny analysis in Rosids with a walnut physical map reveals slow genome evolution in long-lived woody perennials. |
| 001B30 (2015) |
Margaret Staton [États-Unis] ; Tetyana Zhebentyayeva [États-Unis] ; Bode Olukolu [États-Unis] ; Guang Chen Fang [États-Unis] ; Dana Nelson [États-Unis] ; John E. Carlson [États-Unis] ; Albert G. Abbott [États-Unis] | Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes. |
| 001B43 (2015) |
Van L T. Hoang [Australie] ; David J. Innes [Australie] ; P Nicholas Shaw [Australie] ; Gregory R. Monteith [Australie] ; Michael J. Gidley [Australie] ; Ralf G. Dietzgen [Australie] | Sequence diversity and differential expression of major phenylpropanoid-flavonoid biosynthetic genes among three mango varieties. |
| 001B92 (2015) |
Erin T. Hamanishi [Canada] ; Genoa L H. Barchet [Canada] ; Rebecca Dauwe [Canada, France] ; Shawn D. Mansfield [Canada] ; Malcolm M. Campbell [Canada] | Poplar trees reconfigure the transcriptome and metabolome in response to drought in a genotype- and time-of-day-dependent manner. |
| 001D05 (2015) |
Jin Zhang [République populaire de Chine] ; Bobin Liu [République populaire de Chine] ; Jianbo Li [République populaire de Chine] ; Li Zhang [République populaire de Chine] ; Yan Wang [République populaire de Chine] ; Huanquan Zheng [Canada] ; Mengzhu Lu [République populaire de Chine] ; Jun Chen [République populaire de Chine] | Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses. |
| 001D15 (2015) |
Wellington Muchero [États-Unis] ; Jianjun Guo [États-Unis] ; Stephen P. Difazio [États-Unis] ; Jin-Gui Chen [États-Unis] ; Priya Ranjan [États-Unis] ; Gancho T. Slavov [Royaume-Uni] ; Lee E. Gunter [États-Unis] ; Sara Jawdy [États-Unis] ; Anthony C. Bryan [États-Unis] ; Robert Sykes [États-Unis] ; Angela Ziebell [États-Unis] ; Jaroslav Klápšt [Canada, République tchèque] ; Ilga Porth [Canada] ; Oleksandr Skyba [Canada] ; Faride Unda [Canada] ; Yousry A. El-Kassaby [Canada] ; Carl J. Douglas [Canada] ; Shawn D. Mansfield [Canada] ; Joel Martin [États-Unis] ; Wendy Schackwitz [États-Unis] ; Luke M. Evans [États-Unis] ; Olaf Czarnecki [États-Unis] ; Gerald A. Tuskan [États-Unis] | High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus. |
| 001D35 (2015) |
Min Chen [République populaire de Chine] ; Zhimin Cao [République populaire de Chine] | Genome-wide expression profiling of microRNAs in poplar upon infection with the foliar rust fungus Melampsora larici-populina. |
| 001D84 (2015) |
Shu-Dong Zhang [République populaire de Chine] ; Li-Zhen Ling [République populaire de Chine] ; Ting-Shuang Yi [République populaire de Chine] | Evolution and divergence of SBP-box genes in land plants. |
| 001E40 (2015) |
Shaoxun Yuan [République populaire de Chine] ; Bin Xu [République populaire de Chine] ; Jing Zhang [République populaire de Chine] ; Zheni Xie [République populaire de Chine] ; Qiang Cheng [République populaire de Chine] ; Zhimin Yang [République populaire de Chine] ; Qingsheng Cai [République populaire de Chine] ; Bingru Huang [États-Unis] | Comprehensive analysis of CCCH-type zinc finger family genes facilitates functional gene discovery and reflects recent allopolyploidization event in tetraploid switchgrass. |
| 001E48 (2015) |
Desre Pinard [Afrique du Sud] ; Eshchar Mizrachi [Afrique du Sud] ; Charles A. Hefer [Afrique du Sud] ; Anna R. Kersting [Allemagne] ; Fourie Joubert [Afrique du Sud] ; Carl J. Douglas [Canada] ; Shawn D. Mansfield [Canada] ; Alexander A. Myburg [Afrique du Sud] | Comparative analysis of plant carbohydrate active enZymes and their role in xylogenesis. |
| 001F69 (2014) |
Bobin Liu ; Lin Wang ; Jin Zhang ; Jianbo Li ; Huanquan Zheng ; Jun Chen [République populaire de Chine] ; Mengzhu Lu | WUSCHEL-related Homeobox genes in Populus tomentosa: diversified expression patterns and a functional similarity in adventitious root formation. |
| 001F92 (2014) |
Jian Zhang ; Jianju Feng ; Jing Lu ; Yongzhi Yang ; Xu Zhang ; Dongshi Wan ; Jianquan Liu [République populaire de Chine] | Transcriptome differences between two sister desert poplar species under salt stress. |
| 002037 (2014) |
Meixia Ye ; Zhong Chen ; Xiaoxing Su ; Lexiang Ji ; Jia Wang ; Weihua Liao ; Huandi Ma ; Xinmin An [République populaire de Chine] | Study of seed hair growth in Populus tomentosa, an important character of female floral bud development. |
| 002209 (2014) |
Jun Wang ; Na Sun ; Ting Deng ; Lida Zhang [République populaire de Chine] ; Kaijing Zuo | Genome-wide cloning, identification, classification and functional analysis of cotton heat shock transcription factors in cotton (Gossypium hirsutum). |
| 002242 (2014) |
Lijun Liu ; Victor Missirian ; Matthew Zinkgraf ; Andrew Groover ; Vladimir Filkov | Evaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees. |
| 002283 (2014) |
Qiang Cheng [République populaire de Chine] ; Haoran Wang ; Bin Xu ; Sheng Zhu ; Lanxi Hu ; Minren Huang | Discovery of a novel small secreted protein family with conserved N-terminal IGY motif in Dikarya fungi. |
| 002285 (2014) |
Lianhua Guo ; Yingnan Chen ; Ning Ye ; Xiaogang Dai ; Wanxu Yang ; Tongming Yin [République populaire de Chine] | Differential retention and expansion of the ancestral genes associated with the paleopolyploidies in modern rosid plants, as revealed by analysis of the extensins super-gene family. |
| 002300 (2014) |
Jinhuan Chen ; Qianqian Tian ; Tao Pang ; Libo Jiang ; Rongling Wu ; Xinli Xia [République populaire de Chine] ; Weilun Yin | Deep-sequencing transcriptome analysis of low temperature perception in a desert tree, Populus euphratica. |
| 002307 (2014) |
Peng Xu ; Yimeng Kong ; Dongliang Song ; Cheng Huang ; Xuan Li ; Laigeng Li [République populaire de Chine] | Conservation and functional influence of alternative splicing in wood formation of Populus and Eucalyptus. |
| 002310 (2014) |
Vikas Belamkar ; Nathan T. Weeks ; Arvind K. Bharti ; Andrew D. Farmer ; Michelle A. Graham ; Steven B. Cannon [États-Unis] | Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress. |
| 002326 (2014) |
Sergiu Netotea ; David Sundell ; Nathaniel R. Street ; Torgeir R. Hvidsten [Suède] | ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa. |
| 002353 (2014) |
Anselmo Azevedo Santos ; Helen Alves Penha ; Arnaud Bellec ; Carla De Freitas Munhoz ; Andrea Pedrosa-Harand ; Hélène Bergès ; Maria Lucia Carneiro Vieira [Brésil] | Begin at the beginning: A BAC-end view of the passion fruit (Passiflora) genome. |
| 002463 (2013) |
Hua Bao [Canada] ; Eryang Li ; Shawn D. Mansfield ; Quentin C B. Cronk ; Yousry A. El-Kassaby ; Carl J. Douglas | The developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa (black cottonwood) populations. |
| 002527 (2013) |
Eli Rodgers-Melnick [États-Unis] ; Mark Culp ; Stephen P. Difazio | Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS. |
| 002568 (2013) |
Vaibhav Srivastava ; Ogonna Obudulu ; Joakim Bygdell ; Tommy Löfstedt ; Patrik Rydén ; Robert Nilsson ; Maria Ahnlund ; Annika Johansson ; P R Jonsson ; Eva Freyhult ; Johanna Qvarnström ; Jan Karlsson ; Michael Melzer ; Thomas Moritz ; Johan Trygg ; Torgeir R. Hvidsten ; Gunnar Wingsle [Suède] | OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants. |
| 002638 (2013) |
Peng Xu [République populaire de Chine] ; Yimeng Kong ; Xuan Li ; Laigeng Li | Identification of molecular processes needed for vascular formation through transcriptome analysis of different vascular systems. |
