Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.
Identifieur interne : 002290 ( Main/Exploration ); précédent : 002289; suivant : 002291Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.
Auteurs : Sophie Cesbron [France] ; Joel Pothier [Suisse] ; Sophie Gironde [France] ; Marie-Agnès Jacques [France] ; Charles Manceau [France]Source :
- Journal of microbiological methods [ 1872-8359 ] ; 2014.
Descripteurs français
- KwdFr :
- ADN bactérien (génétique), Amorces ADN (génétique), Génotype (MeSH), Maladies des plantes (microbiologie), Répétitions minisatellites (MeSH), Typage moléculaire (méthodes), Xanthomonas (classification), Xanthomonas (génétique), Xanthomonas (isolement et purification), Épidémiologie moléculaire (méthodes).
- MESH :
- génétique : ADN bactérien, Amorces ADN, Xanthomonas.
- isolement et purification : Xanthomonas.
- microbiologie : Maladies des plantes.
- méthodes : Typage moléculaire, Épidémiologie moléculaire.
- Génotype, Répétitions minisatellites.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : DNA Primers, DNA, Bacterial.
- classification : Xanthomonas.
- genetics : Xanthomonas.
- isolation & purification : Xanthomonas.
- methods : Molecular Epidemiology, Molecular Typing.
- microbiology : Plant Diseases.
- Genotype, Minisatellite Repeats.
Abstract
Xanthomonas arboricola is an important bacterial species, the pathovars of which are responsible for bacterial blight diseases on stone fruit, hazelnut, Persian walnut, poplar, strawberry, poinsettia and banana. In this study, we evaluated variable number tandem repeats (VNTR) as a molecular typing tool for assessing the genetic diversity within pathovars of X. arboricola. Screening of the X. arboricola pv. pruni genome sequence (CFBP5530 strain) predicted 51 candidate VNTR loci. Primer pairs for polymerase chain reaction (PCR) amplification of all 51 loci were designed, and their discriminatory power was initially evaluated with a core collection of 8 X. arboricola strains representative of the different pathovars. Next, the 26 polymorphic VNTR loci present in all strains were used for genotyping a collection of 61 strains. MLVA is a typing method that clearly differentiates X. arboricola strains. The MLVA scheme described in this study is a rapid and reliable molecular typing tool that can be used for further epidemiological studies of bacterial diseases caused by X. arboricola pathovars.
DOI: 10.1016/j.mimet.2014.02.017
PubMed: 24631558
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.</title><author><name sortKey="Cesbron, Sophie" sort="Cesbron, Sophie" uniqKey="Cesbron S" first="Sophie" last="Cesbron">Sophie Cesbron</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France. Electronic address: sophie.cesbron@angers.inra.fr.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Pothier, Joel" sort="Pothier, Joel" uniqKey="Pothier J" first="Joel" last="Pothier">Joel Pothier</name><affiliation wicri:level="1"><nlm:affiliation>Agroscope Changins-Wädenswil Research Station ACW, Plant Protection Division, Schloss 1, CH-8820 Wädenswil, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Agroscope Changins-Wädenswil Research Station ACW, Plant Protection Division, Schloss 1, CH-8820 Wädenswil</wicri:regionArea><wicri:noRegion>CH-8820 Wädenswil</wicri:noRegion></affiliation></author><author><name sortKey="Gironde, Sophie" sort="Gironde, Sophie" uniqKey="Gironde S" first="Sophie" last="Gironde">Sophie Gironde</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Jacques, Marie Agnes" sort="Jacques, Marie Agnes" uniqKey="Jacques M" first="Marie-Agnès" last="Jacques">Marie-Agnès Jacques</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Manceau, Charles" sort="Manceau, Charles" uniqKey="Manceau C" first="Charles" last="Manceau">Charles Manceau</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2014">2014</date><idno type="RBID">pubmed:24631558</idno><idno type="pmid">24631558</idno><idno type="doi">10.1016/j.mimet.2014.02.017</idno><idno type="wicri:Area/Main/Corpus">002270</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">002270</idno><idno type="wicri:Area/Main/Curation">002270</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">002270</idno><idno type="wicri:Area/Main/Exploration">002270</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.</title><author><name sortKey="Cesbron, Sophie" sort="Cesbron, Sophie" uniqKey="Cesbron S" first="Sophie" last="Cesbron">Sophie Cesbron</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France. Electronic address: sophie.cesbron@angers.inra.fr.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Pothier, Joel" sort="Pothier, Joel" uniqKey="Pothier J" first="Joel" last="Pothier">Joel Pothier</name><affiliation wicri:level="1"><nlm:affiliation>Agroscope Changins-Wädenswil Research Station ACW, Plant Protection Division, Schloss 1, CH-8820 Wädenswil, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Agroscope Changins-Wädenswil Research Station ACW, Plant Protection Division, Schloss 1, CH-8820 Wädenswil</wicri:regionArea><wicri:noRegion>CH-8820 Wädenswil</wicri:noRegion></affiliation></author><author><name sortKey="Gironde, Sophie" sort="Gironde, Sophie" uniqKey="Gironde S" first="Sophie" last="Gironde">Sophie Gironde</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Jacques, Marie Agnes" sort="Jacques, Marie Agnes" uniqKey="Jacques M" first="Marie-Agnès" last="Jacques">Marie-Agnès Jacques</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author><author><name sortKey="Manceau, Charles" sort="Manceau, Charles" uniqKey="Manceau C" first="Charles" last="Manceau">Charles Manceau</name><affiliation wicri:level="4"><nlm:affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé</wicri:regionArea><placeName><region type="region" nuts="2">Pays de la Loire</region><settlement type="city">Beaucouzé</settlement></placeName><orgName type="university">Université d'Angers</orgName></affiliation></author></analytic><series><title level="j">Journal of microbiological methods</title><idno type="eISSN">1872-8359</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>DNA Primers (genetics)</term><term>DNA, Bacterial (genetics)</term><term>Genotype (MeSH)</term><term>Minisatellite Repeats (MeSH)</term><term>Molecular Epidemiology (methods)</term><term>Molecular Typing (methods)</term><term>Plant Diseases (microbiology)</term><term>Xanthomonas (classification)</term><term>Xanthomonas (genetics)</term><term>Xanthomonas (isolation & purification)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term><term>Amorces ADN (génétique)</term><term>Génotype (MeSH)</term><term>Maladies des plantes (microbiologie)</term><term>Répétitions minisatellites (MeSH)</term><term>Typage moléculaire (méthodes)</term><term>Xanthomonas (classification)</term><term>Xanthomonas (génétique)</term><term>Xanthomonas (isolement et purification)</term><term>Épidémiologie moléculaire (méthodes)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA Primers</term><term>DNA, Bacterial</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Xanthomonas</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Xanthomonas</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term><term>Amorces ADN</term><term>Xanthomonas</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Xanthomonas</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Xanthomonas</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Molecular Epidemiology</term><term>Molecular Typing</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="méthodes" xml:lang="fr"><term>Typage moléculaire</term><term>Épidémiologie moléculaire</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genotype</term><term>Minisatellite Repeats</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Génotype</term><term>Répétitions minisatellites</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Xanthomonas arboricola is an important bacterial species, the pathovars of which are responsible for bacterial blight diseases on stone fruit, hazelnut, Persian walnut, poplar, strawberry, poinsettia and banana. In this study, we evaluated variable number tandem repeats (VNTR) as a molecular typing tool for assessing the genetic diversity within pathovars of X. arboricola. Screening of the X. arboricola pv. pruni genome sequence (CFBP5530 strain) predicted 51 candidate VNTR loci. Primer pairs for polymerase chain reaction (PCR) amplification of all 51 loci were designed, and their discriminatory power was initially evaluated with a core collection of 8 X. arboricola strains representative of the different pathovars. Next, the 26 polymorphic VNTR loci present in all strains were used for genotyping a collection of 61 strains. MLVA is a typing method that clearly differentiates X. arboricola strains. The MLVA scheme described in this study is a rapid and reliable molecular typing tool that can be used for further epidemiological studies of bacterial diseases caused by X. arboricola pathovars. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24631558</PMID><DateCompleted><Year>2015</Year><Month>01</Month><Day>26</Day></DateCompleted><DateRevised><Year>2014</Year><Month>04</Month><Day>18</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1872-8359</ISSN><JournalIssue CitedMedium="Internet"><Volume>100</Volume><PubDate><Year>2014</Year><Month>May</Month></PubDate></JournalIssue><Title>Journal of microbiological methods</Title><ISOAbbreviation>J Microbiol Methods</ISOAbbreviation></Journal><ArticleTitle>Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.</ArticleTitle><Pagination><MedlinePgn>84-90</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.mimet.2014.02.017</ELocationID><ELocationID EIdType="pii" ValidYN="Y">S0167-7012(14)00057-8</ELocationID><Abstract><AbstractText>Xanthomonas arboricola is an important bacterial species, the pathovars of which are responsible for bacterial blight diseases on stone fruit, hazelnut, Persian walnut, poplar, strawberry, poinsettia and banana. In this study, we evaluated variable number tandem repeats (VNTR) as a molecular typing tool for assessing the genetic diversity within pathovars of X. arboricola. Screening of the X. arboricola pv. pruni genome sequence (CFBP5530 strain) predicted 51 candidate VNTR loci. Primer pairs for polymerase chain reaction (PCR) amplification of all 51 loci were designed, and their discriminatory power was initially evaluated with a core collection of 8 X. arboricola strains representative of the different pathovars. Next, the 26 polymorphic VNTR loci present in all strains were used for genotyping a collection of 61 strains. MLVA is a typing method that clearly differentiates X. arboricola strains. The MLVA scheme described in this study is a rapid and reliable molecular typing tool that can be used for further epidemiological studies of bacterial diseases caused by X. arboricola pathovars. </AbstractText><CopyrightInformation>Copyright © 2014 Elsevier B.V. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Cesbron</LastName><ForeName>Sophie</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France. Electronic address: sophie.cesbron@angers.inra.fr.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pothier</LastName><ForeName>Joel</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Agroscope Changins-Wädenswil Research Station ACW, Plant Protection Division, Schloss 1, CH-8820 Wädenswil, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gironde</LastName><ForeName>Sophie</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jacques</LastName><ForeName>Marie-Agnès</ForeName><Initials>MA</Initials><AffiliationInfo><Affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Manceau</LastName><ForeName>Charles</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>INRA, UMR1345 IRHS, F-49071 Beaucouzé, France; AGROCAMPUS OUEST, UMR1345 IRHS, F-49071 Beaucouzé, France; Université d'Angers, UMR1345 IRHS, SFR 4207 QUASAV, PRES L'UNAM, F-49071 Beaucouzé, France.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>03</Month><Day>12</Day></ArticleDate></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>J Microbiol Methods</MedlineTA><NlmUniqueID>8306883</NlmUniqueID><ISSNLinking>0167-7012</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D017931" MajorTopicYN="N">DNA Primers</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018598" MajorTopicYN="Y">Minisatellite Repeats</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017720" MajorTopicYN="N">Molecular Epidemiology</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="N">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058889" MajorTopicYN="N">Molecular Typing</DescriptorName><QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014974" MajorTopicYN="N">Xanthomonas</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Genetic diversity</Keyword><Keyword MajorTopicYN="N">MLVA</Keyword><Keyword MajorTopicYN="N">Molecular epidemiology</Keyword><Keyword MajorTopicYN="N">Xanthomonas arboricola</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>12</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2014</Year><Month>02</Month><Day>27</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>02</Month><Day>28</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>3</Month><Day>18</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>3</Month><Day>19</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>1</Month><Day>27</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24631558</ArticleId><ArticleId IdType="pii">S0167-7012(14)00057-8</ArticleId><ArticleId IdType="doi">10.1016/j.mimet.2014.02.017</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>France</li><li>Suisse</li></country><region><li>Pays de la Loire</li></region><settlement><li>Beaucouzé</li></settlement><orgName><li>Université d'Angers</li></orgName></list><tree><country name="France"><region name="Pays de la Loire"><name sortKey="Cesbron, Sophie" sort="Cesbron, Sophie" uniqKey="Cesbron S" first="Sophie" last="Cesbron">Sophie Cesbron</name></region><name sortKey="Gironde, Sophie" sort="Gironde, Sophie" uniqKey="Gironde S" first="Sophie" last="Gironde">Sophie Gironde</name><name sortKey="Jacques, Marie Agnes" sort="Jacques, Marie Agnes" uniqKey="Jacques M" first="Marie-Agnès" last="Jacques">Marie-Agnès Jacques</name><name sortKey="Manceau, Charles" sort="Manceau, Charles" uniqKey="Manceau C" first="Charles" last="Manceau">Charles Manceau</name></country><country name="Suisse"><noRegion><name sortKey="Pothier, Joel" sort="Pothier, Joel" uniqKey="Pothier J" first="Joel" last="Pothier">Joel Pothier</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002290 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 002290 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:24631558
|texte= Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:24631558" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
| This area was generated with Dilib version V0.6.37. |  |