PoplarV1, Main, Curation, bibRecord, 003823

Ectomycorrhizal communities associated with Populus tremula growing on a heavy metal contaminated site.

Identifieur interne : 003823 ( Main/Curation ); précédent : 003822; suivant : 003824

Ectomycorrhizal communities associated with Populus tremula growing on a heavy metal contaminated site.

Auteurs : Doris Krpata [Autriche] ; Ursula Peintner ; Ingrid Langer ; Walter J. Fitz ; Peter Schweiger

Source :

Mycological research [ 0953-7562 ] ; 2008.

RBID : pubmed:18692376

Descripteurs français

KwdFr :
- ADN fongique (analyse), ADN fongique (isolement et purification), ARN ribosomique 18S (génétique), ARN ribosomique 28S (génétique), Analyse de séquence d'ADN (MeSH), Ascomycota (classification), Ascomycota (croissance et développement), Ascomycota (génétique), Autriche (MeSH), Basidiomycota (classification), Basidiomycota (croissance et développement), Basidiomycota (génétique), Espaceur de l'ADN ribosomique (analyse), Microbiologie du sol (MeSH), Mycorhizes (classification), Mycorhizes (croissance et développement), Mycorhizes (génétique), Métaux lourds (métabolisme), Polluants du sol (métabolisme), Populus (microbiologie), Racines de plante (microbiologie), Réaction de polymérisation en chaîne (MeSH), Symbiose (MeSH), Écosystème (MeSH).
MESH :
- analyse : ADN fongique, Espaceur de l'ADN ribosomique.
- croissance et développement : Ascomycota, Basidiomycota, Mycorhizes.
- génétique : ARN ribosomique 18S, ARN ribosomique 28S, Ascomycota, Basidiomycota, Mycorhizes.
- isolement et purification : ADN fongique.
- microbiologie : Populus, Racines de plante.
- métabolisme : Métaux lourds, Polluants du sol.
- Analyse de séquence d'ADN, Autriche, Microbiologie du sol, Réaction de polymérisation en chaîne, Symbiose, Écosystème.
Wicri :
- geographic : Autriche.

English descriptors

KwdEn :
- Ascomycota (classification), Ascomycota (genetics), Ascomycota (growth & development), Austria (MeSH), Basidiomycota (classification), Basidiomycota (genetics), Basidiomycota (growth & development), DNA, Fungal (analysis), DNA, Fungal (isolation & purification), DNA, Ribosomal Spacer (analysis), Ecosystem (MeSH), Metals, Heavy (metabolism), Mycorrhizae (classification), Mycorrhizae (genetics), Mycorrhizae (growth & development), Plant Roots (microbiology), Polymerase Chain Reaction (MeSH), Populus (microbiology), RNA, Ribosomal, 18S (genetics), RNA, Ribosomal, 28S (genetics), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH), Soil Pollutants (metabolism), Symbiosis (MeSH).
MESH :
- chemical , analysis : DNA, Fungal, DNA, Ribosomal Spacer.
- chemical , genetics : RNA, Ribosomal, 18S, RNA, Ribosomal, 28S.
- chemical , isolation & purification : DNA, Fungal.
- chemical , metabolism : Metals, Heavy, Soil Pollutants.
- geographic : Austria.
- classification : Ascomycota, Basidiomycota, Mycorrhizae.
- genetics : Ascomycota, Basidiomycota, Mycorrhizae.
- growth & development : Ascomycota, Basidiomycota, Mycorrhizae.
- microbiology : Plant Roots, Populus.
- Ecosystem, Polymerase Chain Reaction, Sequence Analysis, DNA, Soil Microbiology, Symbiosis.

Abstract

European aspen is one of the most widely distributed trees in Central Europe and is a typical early colonizer of poor and disturbed soils. However, little is known about ectomycorrhizal (ECM) fungi in these ecosystems. We examined the ECM community of European aspen growing on a heavily contaminated site in southern Austria by analysing ECM roots, sorting them into morphotypes, subjecting them to DNA extraction, PCR, and DNA sequencing. ECM root symbionts were sampled two times in 2004. During this time, the below-ground community structure was relatively stable; we found no evidence of taxa adapted to summer or autumn conditions and only two species varied widely in occurrence between soil horizons. The ECM fungal community was diverse (54 species), rich in Basidiomycota (43 species), and dominated by Cenococcum geophilum and fungi with corticoid basidiomes (e.g. Thelephoraceae).

DOI: 10.1016/j.mycres.2008.02.004
PubMed: 18692376

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pubmed:18692376

Le document en format XML

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<author><name sortKey="Krpata, Doris" sort="Krpata, Doris" uniqKey="Krpata D" first="Doris" last="Krpata">Doris Krpata</name>
<affiliation wicri:level="1"><nlm:affiliation>Institute of Microbiology, University Innsbruck, Technikerstrasse 25, 6020 Innsbruck, Austria. d.krpata@uibk.ac.at</nlm:affiliation>
<country xml:lang="fr">Autriche</country>
<wicri:regionArea>Institute of Microbiology, University Innsbruck, Technikerstrasse 25, 6020 Innsbruck</wicri:regionArea>
</affiliation>
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<author><name sortKey="Peintner, Ursula" sort="Peintner, Ursula" uniqKey="Peintner U" first="Ursula" last="Peintner">Ursula Peintner</name>
</author>
<author><name sortKey="Langer, Ingrid" sort="Langer, Ingrid" uniqKey="Langer I" first="Ingrid" last="Langer">Ingrid Langer</name>
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<author><name sortKey="Fitz, Walter J" sort="Fitz, Walter J" uniqKey="Fitz W" first="Walter J" last="Fitz">Walter J. Fitz</name>
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<author><name sortKey="Schweiger, Peter" sort="Schweiger, Peter" uniqKey="Schweiger P" first="Peter" last="Schweiger">Peter Schweiger</name>
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<affiliation wicri:level="1"><nlm:affiliation>Institute of Microbiology, University Innsbruck, Technikerstrasse 25, 6020 Innsbruck, Austria. d.krpata@uibk.ac.at</nlm:affiliation>
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<wicri:regionArea>Institute of Microbiology, University Innsbruck, Technikerstrasse 25, 6020 Innsbruck</wicri:regionArea>
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<author><name sortKey="Peintner, Ursula" sort="Peintner, Ursula" uniqKey="Peintner U" first="Ursula" last="Peintner">Ursula Peintner</name>
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<author><name sortKey="Fitz, Walter J" sort="Fitz, Walter J" uniqKey="Fitz W" first="Walter J" last="Fitz">Walter J. Fitz</name>
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<series><title level="j">Mycological research</title>
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<term>Ascomycota (genetics)</term>
<term>Ascomycota (growth & development)</term>
<term>Austria (MeSH)</term>
<term>Basidiomycota (classification)</term>
<term>Basidiomycota (genetics)</term>
<term>Basidiomycota (growth & development)</term>
<term>DNA, Fungal (analysis)</term>
<term>DNA, Fungal (isolation & purification)</term>
<term>DNA, Ribosomal Spacer (analysis)</term>
<term>Ecosystem (MeSH)</term>
<term>Metals, Heavy (metabolism)</term>
<term>Mycorrhizae (classification)</term>
<term>Mycorrhizae (genetics)</term>
<term>Mycorrhizae (growth & development)</term>
<term>Plant Roots (microbiology)</term>
<term>Polymerase Chain Reaction (MeSH)</term>
<term>Populus (microbiology)</term>
<term>RNA, Ribosomal, 18S (genetics)</term>
<term>RNA, Ribosomal, 28S (genetics)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Soil Microbiology (MeSH)</term>
<term>Soil Pollutants (metabolism)</term>
<term>Symbiosis (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (analyse)</term>
<term>ADN fongique (isolement et purification)</term>
<term>ARN ribosomique 18S (génétique)</term>
<term>ARN ribosomique 28S (génétique)</term>
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Ascomycota (classification)</term>
<term>Ascomycota (croissance et développement)</term>
<term>Ascomycota (génétique)</term>
<term>Autriche (MeSH)</term>
<term>Basidiomycota (classification)</term>
<term>Basidiomycota (croissance et développement)</term>
<term>Basidiomycota (génétique)</term>
<term>Espaceur de l'ADN ribosomique (analyse)</term>
<term>Microbiologie du sol (MeSH)</term>
<term>Mycorhizes (classification)</term>
<term>Mycorhizes (croissance et développement)</term>
<term>Mycorhizes (génétique)</term>
<term>Métaux lourds (métabolisme)</term>
<term>Polluants du sol (métabolisme)</term>
<term>Populus (microbiologie)</term>
<term>Racines de plante (microbiologie)</term>
<term>Réaction de polymérisation en chaîne (MeSH)</term>
<term>Symbiose (MeSH)</term>
<term>Écosystème (MeSH)</term>
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<term>DNA, Ribosomal Spacer</term>
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<term>RNA, Ribosomal, 28S</term>
</keywords>
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<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Metals, Heavy</term>
<term>Soil Pollutants</term>
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<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Austria</term>
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<keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>ADN fongique</term>
<term>Espaceur de l'ADN ribosomique</term>
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<term>Basidiomycota</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Ascomycota</term>
<term>Basidiomycota</term>
<term>Mycorhizes</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Ascomycota</term>
<term>Basidiomycota</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Ascomycota</term>
<term>Basidiomycota</term>
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<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN ribosomique 18S</term>
<term>ARN ribosomique 28S</term>
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<term>Basidiomycota</term>
<term>Mycorhizes</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>ADN fongique</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Populus</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Roots</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Métaux lourds</term>
<term>Polluants du sol</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Ecosystem</term>
<term>Polymerase Chain Reaction</term>
<term>Sequence Analysis, DNA</term>
<term>Soil Microbiology</term>
<term>Symbiosis</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Autriche</term>
<term>Microbiologie du sol</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Symbiose</term>
<term>Écosystème</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Autriche</term>
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<front><div type="abstract" xml:lang="en">European aspen is one of the most widely distributed trees in Central Europe and is a typical early colonizer of poor and disturbed soils. However, little is known about ectomycorrhizal (ECM) fungi in these ecosystems. We examined the ECM community of European aspen growing on a heavily contaminated site in southern Austria by analysing ECM roots, sorting them into morphotypes, subjecting them to DNA extraction, PCR, and DNA sequencing. ECM root symbionts were sampled two times in 2004. During this time, the below-ground community structure was relatively stable; we found no evidence of taxa adapted to summer or autumn conditions and only two species varied widely in occurrence between soil horizons. The ECM fungal community was diverse (54 species), rich in Basidiomycota (43 species), and dominated by Cenococcum geophilum and fungi with corticoid basidiomes (e.g. Thelephoraceae).</div>
</front>
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<Title>Mycological research</Title>
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<ArticleTitle>Ectomycorrhizal communities associated with Populus tremula growing on a heavy metal contaminated site.</ArticleTitle>
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<Abstract><AbstractText>European aspen is one of the most widely distributed trees in Central Europe and is a typical early colonizer of poor and disturbed soils. However, little is known about ectomycorrhizal (ECM) fungi in these ecosystems. We examined the ECM community of European aspen growing on a heavily contaminated site in southern Austria by analysing ECM roots, sorting them into morphotypes, subjecting them to DNA extraction, PCR, and DNA sequencing. ECM root symbionts were sampled two times in 2004. During this time, the below-ground community structure was relatively stable; we found no evidence of taxa adapted to summer or autumn conditions and only two species varied widely in occurrence between soil horizons. The ECM fungal community was diverse (54 species), rich in Basidiomycota (43 species), and dominated by Cenococcum geophilum and fungi with corticoid basidiomes (e.g. Thelephoraceae).</AbstractText>
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<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Krpata</LastName>
<ForeName>Doris</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>Institute of Microbiology, University Innsbruck, Technikerstrasse 25, 6020 Innsbruck, Austria. d.krpata@uibk.ac.at</Affiliation>
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<Author ValidYN="Y"><LastName>Peintner</LastName>
<ForeName>Ursula</ForeName>
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<Author ValidYN="Y"><LastName>Langer</LastName>
<ForeName>Ingrid</ForeName>
<Initials>I</Initials>
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<Author ValidYN="Y"><LastName>Fitz</LastName>
<ForeName>Walter J</ForeName>
<Initials>WJ</Initials>
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<Author ValidYN="Y"><LastName>Schweiger</LastName>
<ForeName>Peter</ForeName>
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Ectomycorrhizal communities associated with Populus tremula growing on a heavy metal contaminated site.

Ectomycorrhizal communities associated with Populus tremula growing on a heavy metal contaminated site.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

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Le document en format XML

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