Genetic analysis and fine mapping of RpsJS, a novel resistance gene to Phytophthora sojae in soybean [Glycine max (L.) Merr].
Identifieur interne : 001151 ( Main/Corpus ); précédent : 001150; suivant : 001152Genetic analysis and fine mapping of RpsJS, a novel resistance gene to Phytophthora sojae in soybean [Glycine max (L.) Merr].
Auteurs : Jutao Sun ; Lihong Li ; Jinming Zhao ; Jing Huang ; Qiang Yan ; Han Xing ; Na GuoSource :
- TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [ 1432-2242 ] ; 2014.
English descriptors
- KwdEn :
- Chromosome Segregation (genetics), Chromosomes, Plant (genetics), Disease Resistance (genetics), Genes, Plant (genetics), Genetic Association Studies (MeSH), Genetic Markers (MeSH), Inheritance Patterns (genetics), Microsatellite Repeats (genetics), Physical Chromosome Mapping (methods), Phytophthora (physiology), Plant Diseases (genetics), Plant Diseases (microbiology), Soybeans (genetics), Soybeans (microbiology).
- MESH :
- chemical : Genetic Markers.
- genetics : Chromosome Segregation, Chromosomes, Plant, Disease Resistance, Genes, Plant, Inheritance Patterns, Microsatellite Repeats, Plant Diseases, Soybeans.
- methods : Physical Chromosome Mapping.
- microbiology : Plant Diseases, Soybeans.
- physiology : Phytophthora.
- Genetic Association Studies.
Abstract
KEY MESSAGE
We finely map a novel resistance gene ( RpsJS ) to Phytophthora sojae in soybean. RpsJS was mapped in 138.9 kb region, including three NBS-LRR type predicted genes, on chromosome 18. Phytophthora root rot (PRR) caused by Phytophthora sojae (P. sojae) has been reported in most soybean-growing regions throughout the world. Development of PRR resistance varieties is the most economical and environmentally safe method for controlling this disease. Chinese soybean line Nannong 10-1 is resistant to many P. sojae isolates, and shows different reaction types to P. sojae isolates as compared with those with known Rps (Resistance to P. sojae) genes, which suggests that the line may carry novel Rps genes or alleles. A mapping population of 231 F(2) individuals from the cross of Nannong 10-1 (Resistant, R) and 06-070583 (Susceptible, S) was used to map the Rps gene. The segregation fits a ratio of 3R:1S within F(2) plants, indicating that resistance in Nannong 10-1 is controlled by a single dominant gene (designated as RpsJS). The results showed that RpsJS was mapped on soybean chromosome 18 (molecular linkage group G, MLG G) flanked by SSR (simple repeat sequences) markers BARCSOYSSR_18_1859 and SSRG60752K at a distance of 0.9 and 0.4 cm, respectively. Among the 14 genes annotated in this 138.9 kb region between the two markers, three genes (Glyma18g51930, Glyma18g51950 and Glyma18g51960) are the nucleotide-binding site and a leucine-rich repeat (NBS-LRR) type gene, which may be involved in recognizing the presence of pathogens and ultimately conferring resistance. Based on marker-assisted resistance spectrum analyses of RpsJS and the mapping results, we inferred that RpsJS was a novel gene or a new allele at the Rps4, Rps5 or Rps6 loci.
DOI: 10.1007/s00122-014-2266-2
PubMed: 24419901
Links to Exploration step
pubmed:24419901Le document en format XML
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Merr].</title><author><name sortKey="Sun, Jutao" sort="Sun, Jutao" uniqKey="Sun J" first="Jutao" last="Sun">Jutao Sun</name><affiliation><nlm:affiliation>National Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.</nlm:affiliation></affiliation></author><author><name sortKey="Li, Lihong" sort="Li, Lihong" uniqKey="Li L" first="Lihong" last="Li">Lihong Li</name></author><author><name sortKey="Zhao, Jinming" sort="Zhao, Jinming" uniqKey="Zhao J" first="Jinming" last="Zhao">Jinming Zhao</name></author><author><name sortKey="Huang, Jing" sort="Huang, Jing" uniqKey="Huang J" first="Jing" last="Huang">Jing Huang</name></author><author><name sortKey="Yan, Qiang" sort="Yan, Qiang" uniqKey="Yan Q" first="Qiang" last="Yan">Qiang Yan</name></author><author><name sortKey="Xing, Han" sort="Xing, Han" uniqKey="Xing H" first="Han" last="Xing">Han Xing</name></author><author><name sortKey="Guo, Na" sort="Guo, Na" uniqKey="Guo N" first="Na" last="Guo">Na Guo</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2014">2014</date><idno type="RBID">pubmed:24419901</idno><idno type="pmid">24419901</idno><idno type="doi">10.1007/s00122-014-2266-2</idno><idno type="wicri:Area/Main/Corpus">001151</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001151</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genetic analysis and fine mapping of RpsJS, a novel resistance gene to Phytophthora sojae in soybean [Glycine max (L.) Merr].</title><author><name sortKey="Sun, Jutao" sort="Sun, Jutao" uniqKey="Sun J" first="Jutao" last="Sun">Jutao Sun</name><affiliation><nlm:affiliation>National Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.</nlm:affiliation></affiliation></author><author><name sortKey="Li, Lihong" sort="Li, Lihong" uniqKey="Li L" first="Lihong" last="Li">Lihong Li</name></author><author><name sortKey="Zhao, Jinming" sort="Zhao, Jinming" uniqKey="Zhao J" first="Jinming" last="Zhao">Jinming Zhao</name></author><author><name sortKey="Huang, Jing" sort="Huang, Jing" uniqKey="Huang J" first="Jing" last="Huang">Jing Huang</name></author><author><name sortKey="Yan, Qiang" sort="Yan, Qiang" uniqKey="Yan Q" first="Qiang" last="Yan">Qiang Yan</name></author><author><name sortKey="Xing, Han" sort="Xing, Han" uniqKey="Xing H" first="Han" last="Xing">Han Xing</name></author><author><name sortKey="Guo, Na" sort="Guo, Na" uniqKey="Guo N" first="Na" last="Guo">Na Guo</name></author></analytic><series><title level="j">TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</title><idno type="eISSN">1432-2242</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chromosome Segregation (genetics)</term><term>Chromosomes, Plant (genetics)</term><term>Disease Resistance (genetics)</term><term>Genes, Plant (genetics)</term><term>Genetic Association Studies (MeSH)</term><term>Genetic Markers (MeSH)</term><term>Inheritance Patterns (genetics)</term><term>Microsatellite Repeats (genetics)</term><term>Physical Chromosome Mapping (methods)</term><term>Phytophthora (physiology)</term><term>Plant Diseases (genetics)</term><term>Plant Diseases (microbiology)</term><term>Soybeans (genetics)</term><term>Soybeans (microbiology)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Genetic Markers</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Chromosome Segregation</term><term>Chromosomes, Plant</term><term>Disease Resistance</term><term>Genes, Plant</term><term>Inheritance Patterns</term><term>Microsatellite Repeats</term><term>Plant Diseases</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Physical Chromosome Mapping</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genetic Association Studies</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>KEY MESSAGE</b></p><p>We finely map a novel resistance gene ( RpsJS ) to Phytophthora sojae in soybean. RpsJS was mapped in 138.9 kb region, including three NBS-LRR type predicted genes, on chromosome 18. Phytophthora root rot (PRR) caused by Phytophthora sojae (P. sojae) has been reported in most soybean-growing regions throughout the world. Development of PRR resistance varieties is the most economical and environmentally safe method for controlling this disease. Chinese soybean line Nannong 10-1 is resistant to many P. sojae isolates, and shows different reaction types to P. sojae isolates as compared with those with known Rps (Resistance to P. sojae) genes, which suggests that the line may carry novel Rps genes or alleles. A mapping population of 231 F(2) individuals from the cross of Nannong 10-1 (Resistant, R) and 06-070583 (Susceptible, S) was used to map the Rps gene. The segregation fits a ratio of 3R:1S within F(2) plants, indicating that resistance in Nannong 10-1 is controlled by a single dominant gene (designated as RpsJS). The results showed that RpsJS was mapped on soybean chromosome 18 (molecular linkage group G, MLG G) flanked by SSR (simple repeat sequences) markers BARCSOYSSR_18_1859 and SSRG60752K at a distance of 0.9 and 0.4 cm, respectively. Among the 14 genes annotated in this 138.9 kb region between the two markers, three genes (Glyma18g51930, Glyma18g51950 and Glyma18g51960) are the nucleotide-binding site and a leucine-rich repeat (NBS-LRR) type gene, which may be involved in recognizing the presence of pathogens and ultimately conferring resistance. Based on marker-assisted resistance spectrum analyses of RpsJS and the mapping results, we inferred that RpsJS was a novel gene or a new allele at the Rps4, Rps5 or Rps6 loci.</p></div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24419901</PMID><DateCompleted><Year>2014</Year><Month>11</Month><Day>12</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-2242</ISSN><JournalIssue CitedMedium="Internet"><Volume>127</Volume><Issue>4</Issue><PubDate><Year>2014</Year><Month>Apr</Month></PubDate></JournalIssue><Title>TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</Title><ISOAbbreviation>Theor Appl Genet</ISOAbbreviation></Journal><ArticleTitle>Genetic analysis and fine mapping of RpsJS, a novel resistance gene to Phytophthora sojae in soybean [Glycine max (L.) Merr].</ArticleTitle><Pagination><MedlinePgn>913-9</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00122-014-2266-2</ELocationID><Abstract><AbstractText Label="KEY MESSAGE" NlmCategory="CONCLUSIONS">We finely map a novel resistance gene ( RpsJS ) to Phytophthora sojae in soybean. RpsJS was mapped in 138.9 kb region, including three NBS-LRR type predicted genes, on chromosome 18. Phytophthora root rot (PRR) caused by Phytophthora sojae (P. sojae) has been reported in most soybean-growing regions throughout the world. Development of PRR resistance varieties is the most economical and environmentally safe method for controlling this disease. Chinese soybean line Nannong 10-1 is resistant to many P. sojae isolates, and shows different reaction types to P. sojae isolates as compared with those with known Rps (Resistance to P. sojae) genes, which suggests that the line may carry novel Rps genes or alleles. A mapping population of 231 F(2) individuals from the cross of Nannong 10-1 (Resistant, R) and 06-070583 (Susceptible, S) was used to map the Rps gene. The segregation fits a ratio of 3R:1S within F(2) plants, indicating that resistance in Nannong 10-1 is controlled by a single dominant gene (designated as RpsJS). The results showed that RpsJS was mapped on soybean chromosome 18 (molecular linkage group G, MLG G) flanked by SSR (simple repeat sequences) markers BARCSOYSSR_18_1859 and SSRG60752K at a distance of 0.9 and 0.4 cm, respectively. Among the 14 genes annotated in this 138.9 kb region between the two markers, three genes (Glyma18g51930, Glyma18g51950 and Glyma18g51960) are the nucleotide-binding site and a leucine-rich repeat (NBS-LRR) type gene, which may be involved in recognizing the presence of pathogens and ultimately conferring resistance. Based on marker-assisted resistance spectrum analyses of RpsJS and the mapping results, we inferred that RpsJS was a novel gene or a new allele at the Rps4, Rps5 or Rps6 loci.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Sun</LastName><ForeName>Jutao</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>National Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Lihong</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Jinming</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>Jing</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Yan</LastName><ForeName>Qiang</ForeName><Initials>Q</Initials></Author><Author ValidYN="Y"><LastName>Xing</LastName><ForeName>Han</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Guo</LastName><ForeName>Na</ForeName><Initials>N</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>01</Month><Day>14</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Theor Appl Genet</MedlineTA><NlmUniqueID>0145600</NlmUniqueID><ISSNLinking>0040-5752</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005819">Genetic 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MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013025" MajorTopicYN="N">Soybeans</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>06</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>01</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>1</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>1</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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