Identification of Soil Bacterial Isolates Suppressing Different Phytophthora spp. and Promoting Plant Growth.
Identifieur interne : 000629 ( Main/Corpus ); précédent : 000628; suivant : 000630Identification of Soil Bacterial Isolates Suppressing Different Phytophthora spp. and Promoting Plant Growth.
Auteurs : Sharifah Farhana Syed-Ab-Rahman ; Lilia C. Carvalhais ; Elvis Chua ; Yawen Xiao ; Taylor J. Wass ; Peer M. SchenkSource :
- Frontiers in plant science [ 1664-462X ] ; 2018.
Abstract
Bacterial isolates obtained from the rhizosphere of Arabidopsis and a plantless compost potting mix was screened for anti-oomycete activity against Phytophthora capsici, Phytophthora citricola, Phytophthora palmivora, and Phytophthora cinnamomi. Three out of 48 isolates exhibited more than 65% inhibition against all tested Phytophthora species and were selected for further studies. These strains, named UQ154, UQ156, and UQ202, are closely related to Bacillus amyloliquefaciens, Bacillus velezensis, and Acinetobacter sp., respectively, based on 16S rDNA sequence analysis. The isolates were evaluated for their ability to fix nitrogen, solubilize phosphate, as well as for siderophore, indoleacetic acid, cell wall degrading enzymes and biofilm production. Their plant growth promoting activities were evaluated by measuring their effect on the germination percentage, root and shoot length, and seedling vigor of lettuce plants. All of these traits were significantly enhanced in plants grown from seeds inoculated with the isolates compared with control plants. Moreover, bacteria-inoculated P. capsici-infected chili plants exhibited improved productivity based on CO2 assimilation rates. Both real-time quantitative PCR and disease severity index revealed significant decreases in pathogen load in infected chili root tissues when plants were previously inoculated with the isolates. Biocontrol activity may result from the secretion of diketopiperazines as identified by Gas chromatography-mass spectrometry analysis of bacterial cultures' extracts. Collectively, this work demonstrates the potential of bacterial isolates to control Phytophthora infection and promote plant growth. They can, therefore be considered as candidate microbial biofertilizers and biopesticides.
DOI: 10.3389/fpls.2018.01502
PubMed: 30405657
PubMed Central: PMC6201231
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Carvalhais</name><affiliation><nlm:affiliation>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Chua, Elvis" sort="Chua, Elvis" uniqKey="Chua E" first="Elvis" last="Chua">Elvis Chua</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Xiao, Yawen" sort="Xiao, Yawen" uniqKey="Xiao Y" first="Yawen" last="Xiao">Yawen Xiao</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Wass, Taylor J" sort="Wass, Taylor J" uniqKey="Wass T" first="Taylor J" last="Wass">Taylor J. Wass</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Schenk, Peer M" sort="Schenk, Peer M" uniqKey="Schenk P" first="Peer M" last="Schenk">Peer M. 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Carvalhais</name><affiliation><nlm:affiliation>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Chua, Elvis" sort="Chua, Elvis" uniqKey="Chua E" first="Elvis" last="Chua">Elvis Chua</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Xiao, Yawen" sort="Xiao, Yawen" uniqKey="Xiao Y" first="Yawen" last="Xiao">Yawen Xiao</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Wass, Taylor J" sort="Wass, Taylor J" uniqKey="Wass T" first="Taylor J" last="Wass">Taylor J. Wass</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Schenk, Peer M" sort="Schenk, Peer M" uniqKey="Schenk P" first="Peer M" last="Schenk">Peer M. Schenk</name><affiliation><nlm:affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Bacterial isolates obtained from the rhizosphere of <i>Arabidopsis</i> and a plantless compost potting mix was screened for anti-oomycete activity against <i>Phytophthora capsici</i>, <i>Phytophthora citricola</i>, <i>Phytophthora palmivora</i>, and <i>Phytophthora cinnamomi</i>. Three out of 48 isolates exhibited more than 65% inhibition against all tested <i>Phytophthora</i> species and were selected for further studies. These strains, named UQ154, UQ156, and UQ202, are closely related to <i>Bacillus amyloliquefaciens</i>, <i>Bacillus velezensis</i>, and <i>Acinetobacter</i> sp., respectively, based on 16S rDNA sequence analysis. The isolates were evaluated for their ability to fix nitrogen, solubilize phosphate, as well as for siderophore, indoleacetic acid, cell wall degrading enzymes and biofilm production. Their plant growth promoting activities were evaluated by measuring their effect on the germination percentage, root and shoot length, and seedling vigor of lettuce plants. All of these traits were significantly enhanced in plants grown from seeds inoculated with the isolates compared with control plants. Moreover, bacteria-inoculated <i>P. capsici</i>-infected chili plants exhibited improved productivity based on CO<sub>2</sub> assimilation rates. Both real-time quantitative PCR and disease severity index revealed significant decreases in pathogen load in infected chili root tissues when plants were previously inoculated with the isolates. Biocontrol activity may result from the secretion of diketopiperazines as identified by Gas chromatography-mass spectrometry analysis of bacterial cultures' extracts. Collectively, this work demonstrates the potential of bacterial isolates to control <i>Phytophthora</i> infection and promote plant growth. They can, therefore be considered as candidate microbial biofertilizers and biopesticides.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">30405657</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>9</Volume><PubDate><Year>2018</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Identification of Soil Bacterial Isolates Suppressing Different <i>Phytophthora</i> spp. and Promoting Plant Growth.</ArticleTitle><Pagination><MedlinePgn>1502</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2018.01502</ELocationID><Abstract><AbstractText>Bacterial isolates obtained from the rhizosphere of <i>Arabidopsis</i> and a plantless compost potting mix was screened for anti-oomycete activity against <i>Phytophthora capsici</i>, <i>Phytophthora citricola</i>, <i>Phytophthora palmivora</i>, and <i>Phytophthora cinnamomi</i>. Three out of 48 isolates exhibited more than 65% inhibition against all tested <i>Phytophthora</i> species and were selected for further studies. These strains, named UQ154, UQ156, and UQ202, are closely related to <i>Bacillus amyloliquefaciens</i>, <i>Bacillus velezensis</i>, and <i>Acinetobacter</i> sp., respectively, based on 16S rDNA sequence analysis. The isolates were evaluated for their ability to fix nitrogen, solubilize phosphate, as well as for siderophore, indoleacetic acid, cell wall degrading enzymes and biofilm production. Their plant growth promoting activities were evaluated by measuring their effect on the germination percentage, root and shoot length, and seedling vigor of lettuce plants. All of these traits were significantly enhanced in plants grown from seeds inoculated with the isolates compared with control plants. Moreover, bacteria-inoculated <i>P. capsici</i>-infected chili plants exhibited improved productivity based on CO<sub>2</sub> assimilation rates. Both real-time quantitative PCR and disease severity index revealed significant decreases in pathogen load in infected chili root tissues when plants were previously inoculated with the isolates. Biocontrol activity may result from the secretion of diketopiperazines as identified by Gas chromatography-mass spectrometry analysis of bacterial cultures' extracts. Collectively, this work demonstrates the potential of bacterial isolates to control <i>Phytophthora</i> infection and promote plant growth. They can, therefore be considered as candidate microbial biofertilizers and biopesticides.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Syed-Ab-Rahman</LastName><ForeName>Sharifah Farhana</ForeName><Initials>SF</Initials><AffiliationInfo><Affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Carvalhais</LastName><ForeName>Lilia C</ForeName><Initials>LC</Initials><AffiliationInfo><Affiliation>Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chua</LastName><ForeName>Elvis</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xiao</LastName><ForeName>Yawen</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wass</LastName><ForeName>Taylor J</ForeName><Initials>TJ</Initials><AffiliationInfo><Affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Schenk</LastName><ForeName>Peer M</ForeName><Initials>PM</Initials><AffiliationInfo><Affiliation>Plant-Microbe Interactions Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD, Australia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>10</Month><Day>18</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Phytophthora</Keyword><Keyword MajorTopicYN="N">biocontrol agent</Keyword><Keyword MajorTopicYN="N">microbial biofertilizer</Keyword><Keyword MajorTopicYN="N">microbial biopesticide</Keyword><Keyword MajorTopicYN="N">oomycete</Keyword><Keyword MajorTopicYN="N">plant growth-promoting bacteria</Keyword><Keyword MajorTopicYN="N">soil microbial antagonism</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate 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