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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery<xref ref-type="fn" rid="fn1"><sup>[OPEN]</sup></xref></title><author><name sortKey="Nishimura, Kenji" sort="Nishimura, Kenji" uniqKey="Nishimura K" first="Kenji" last="Nishimura">Kenji Nishimura</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Apitz, Janina" sort="Apitz, Janina" uniqKey="Apitz J" first="Janina" last="Apitz">Janina Apitz</name><affiliation><nlm:aff id="aff3">Department of Plant Physiology, Humboldt University, 10115 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Friso, Giulia" sort="Friso, Giulia" uniqKey="Friso G" first="Giulia" last="Friso">Giulia Friso</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Kim, Jitae" sort="Kim, Jitae" uniqKey="Kim J" first="Jitae" last="Kim">Jitae Kim</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Ponnala, Lalit" sort="Ponnala, Lalit" uniqKey="Ponnala L" first="Lalit" last="Ponnala">Lalit Ponnala</name><affiliation><nlm:aff id="aff2">Computational Biology Service Unit, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Grimm, Bernhard" sort="Grimm, Bernhard" uniqKey="Grimm B" first="Bernhard" last="Grimm">Bernhard Grimm</name><affiliation><nlm:aff id="aff3">Department of Plant Physiology, Humboldt University, 10115 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Van Wijk, Klaas J" sort="Van Wijk, Klaas J" uniqKey="Van Wijk K" first="Klaas J." last="Van Wijk">Klaas J. Van Wijk</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26419670</idno><idno type="pmc">4682326</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682326</idno><idno type="RBID">PMC:4682326</idno><idno type="doi">10.1105/tpc.15.00574</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000018</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery<xref ref-type="fn" rid="fn1"><sup>[OPEN]</sup></xref></title><author><name sortKey="Nishimura, Kenji" sort="Nishimura, Kenji" uniqKey="Nishimura K" first="Kenji" last="Nishimura">Kenji Nishimura</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Apitz, Janina" sort="Apitz, Janina" uniqKey="Apitz J" first="Janina" last="Apitz">Janina Apitz</name><affiliation><nlm:aff id="aff3">Department of Plant Physiology, Humboldt University, 10115 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Friso, Giulia" sort="Friso, Giulia" uniqKey="Friso G" first="Giulia" last="Friso">Giulia Friso</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Kim, Jitae" sort="Kim, Jitae" uniqKey="Kim J" first="Jitae" last="Kim">Jitae Kim</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Ponnala, Lalit" sort="Ponnala, Lalit" uniqKey="Ponnala L" first="Lalit" last="Ponnala">Lalit Ponnala</name><affiliation><nlm:aff id="aff2">Computational Biology Service Unit, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author><author><name sortKey="Grimm, Bernhard" sort="Grimm, Bernhard" uniqKey="Grimm B" first="Bernhard" last="Grimm">Bernhard Grimm</name><affiliation><nlm:aff id="aff3">Department of Plant Physiology, Humboldt University, 10115 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Van Wijk, Klaas J" sort="Van Wijk, Klaas J" uniqKey="Van Wijk K" first="Klaas J." last="Van Wijk">Klaas J. Van Wijk</name><affiliation><nlm:aff id="aff1">Department of Plant Biology, Cornell University, Ithaca, New York 14853</nlm:aff></affiliation></author></analytic><series><title level="j">The Plant Cell</title><idno type="ISSN">1040-4651</idno><idno type="eISSN">1532-298X</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Discovery of a multimeric adaptor system for the chloroplast Clp protease machinery suggests a complex mechanism regulates substrate recognition and delivery in chloroplasts.</p></div></front></TEI><pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Plant Cell</journal-id><journal-id journal-id-type="iso-abbrev">Plant Cell</journal-id><journal-id journal-id-type="hwp">plantcell</journal-id><journal-id journal-id-type="publisher-id">aspb</journal-id><journal-title-group><journal-title>The Plant Cell</journal-title></journal-title-group><issn pub-type="ppub">1040-4651</issn><issn pub-type="epub">1532-298X</issn><publisher><publisher-name>American Society of Plant Biologists</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">26419670</article-id><article-id pub-id-type="pmc">4682326</article-id><article-id pub-id-type="publisher-id">TPC201500574BRR2</article-id><article-id pub-id-type="doi">10.1105/tpc.15.00574</article-id><article-categories><subj-group subj-group-type="heading"><subject>Breakthrough Report</subject></subj-group></article-categories><title-group><article-title>Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery<xref ref-type="fn" rid="fn1"><sup>[OPEN]</sup></xref></article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Nishimura</surname><given-names>Kenji</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref><xref ref-type="author-notes" rid="afn2"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Apitz</surname><given-names>Janina</given-names></name><xref ref-type="aff" rid="aff3"><sup>c</sup></xref></contrib><contrib contrib-type="author"><name><surname>Friso</surname><given-names>Giulia</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref></contrib><contrib contrib-type="author"><name><surname>Kim</surname><given-names>Jitae</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref></contrib><contrib contrib-type="author"><name><surname>Ponnala</surname><given-names>Lalit</given-names></name><xref ref-type="aff" rid="aff2"><sup>b</sup></xref></contrib><contrib contrib-type="author"><name><surname>Grimm</surname><given-names>Bernhard</given-names></name><xref ref-type="aff" rid="aff3"><sup>c</sup></xref></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid" authenticated="false">http://orcid.org/0000-0001-9536-0487</contrib-id><name><surname>van Wijk</surname><given-names>Klaas J.</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref><xref ref-type="corresp" rid="cor1"><sup>2</sup></xref></contrib><aff id="aff1"><label>a</label>Department of Plant Biology, Cornell University, Ithaca, New York 14853</aff><aff id="aff2"><label>b</label>Computational Biology Service Unit, Cornell University, Ithaca, New York 14853</aff><aff id="aff3"><label>c</label>Department of Plant Physiology, Humboldt University, 10115 Berlin, Germany</aff></contrib-group><author-notes><fn><p><ext-link ext-link-type="uri" xlink:href="http://www.plantcell.org/cgi/doi/10.1105/tpc.15.00574">www.plantcell.org/cgi/doi/10.1105/tpc.15.00574</ext-link></p></fn><corresp id="cor1"><label>2</label>Address correspondence to <email>kv35@cornell.edu</email>.</corresp><fn id="afn1"><p>The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (<ext-link ext-link-type="uri" xlink:href="http://www.plantcell.org">www.plantcell.org</ext-link>) is: Klaas J. van Wijk (<email>kv35@cornell.edu</email>).</p></fn><fn id="afn2" fn-type="present-address"><label>1</label><p>Current address: Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Okayama, Japan.</p></fn></author-notes><pmc-comment>Fake ppub date generated by PMC from publisher
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<pub-date pub-type="ppub"><month>10</month><year>2015</year></pub-date><pub-date pub-type="epub"><day>29</day><month>9</month><year>2015</year></pub-date><pub-date pub-type="pmc-release"><day>29</day><month>9</month><year>2015</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
<volume>27</volume><issue>10</issue><fpage>2677</fpage><lpage>2691</lpage><history><date date-type="received"><day>26</day><month>6</month><year>2015</year></date><date date-type="rev-recd"><day>04</day><month>9</month><year>2015</year></date><date date-type="accepted"><day>15</day><month>9</month><year>2015</year></date></history><permissions><copyright-statement>© 2015 American Society of Plant Biologists. All rights reserved.</copyright-statement><copyright-year>2015</copyright-year></permissions><self-uri xlink:role="icon" xlink:href="PC_TPC201500574BRR2_ic1.gif"></self-uri><abstract abstract-type="precis"><p>Discovery of a multimeric adaptor system for the chloroplast Clp protease machinery suggests a complex mechanism regulates substrate recognition and delivery in chloroplasts.</p></abstract><abstract><p>Clp proteases are found in prokaryotes, mitochondria, and plastids where they play crucial roles in maintaining protein homeostasis (proteostasis). The plant plastid Clp machinery comprises a hetero-oligomeric ClpPRT proteolytic core, ATP-dependent chaperones ClpC and ClpD, and an adaptor protein, ClpS1. ClpS1 selects substrates to the ClpPR protease-ClpC chaperone complex for degradation, but the underlying substrate recognition and delivery mechanisms are currently unclear. Here, we characterize a ClpS1-interacting protein in <italic>Arabidopsis thaliana</italic>, ClpF, which can interact with the Clp substrate glutamyl-tRNA reductase. ClpF and ClpS1 mutually stimulate their association with ClpC. ClpF, which is only found in photosynthetic eukaryotes, contains bacterial uvrB/C and YccV protein domains and a unique N-terminal domain. We propose a testable model in which ClpS1 and ClpF form a binary adaptor for selective substrate recognition and delivery to ClpC, reflecting an evolutionary adaptation of the Clp system to the plastid proteome.</p></abstract><counts><page-count count="15"></page-count></counts><custom-meta-group><custom-meta><meta-name> DJS Export </meta-name><meta-value>v1</meta-value></custom-meta></custom-meta-group></article-meta><notes><glossary><title>Glossary</title><def-list><def-item><term id="term1">NTE</term><def id="def1"><p>N-terminal extension</p></def></def-item><def-item><term id="term2">MS/MS</term><def id="def2"><p>tandem mass spectrometry</p></def></def-item><def-item><term id="term3">MEP</term><def id="def3"><p>2-C-methyl-<sc>d</sc>-erythritol 4-phosphate/1-deoxy-<sc>d</sc>-xylulose 5-phosphate</p></def></def-item><def-item><term id="term4">HDS</term><def id="def4"><p>4-hydroxy-3-methylbutyl diphosphate synthase</p></def></def-item><def-item><term id="term5">co-IP</term><def id="def5"><p>coimmunoprecipitation</p></def></def-item><def-item><term id="term6">SEC</term><def id="def6"><p>size-exclusion chromatography</p></def></def-item></def-list></glossary></notes></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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