Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (Citrus sinensis Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene
Identifieur interne : 001164 ( Main/Exploration ); précédent : 001163; suivant : 001165Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (Citrus sinensis Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene
Auteurs : Xing-Zheng Fu [République populaire de Chine] ; Ji-Hong Liu [République populaire de Chine]Source :
- BioMed Research International [ 2314-6133 ] ; 2012.
English descriptors
- KwdEn :
- Cell Wall (metabolism), Citrus (genetics), Citrus (microbiology), DNA Primers, Disease Resistance (genetics), Gene Expression Profiling, Gene Expression Regulation, Plant, Genetic Engineering, Oligonucleotide Array Sequence Analysis, Plant Diseases (genetics), Plant Diseases (microbiology), Plant Leaves (metabolism), Plants, Genetically Modified (genetics), Plants, Genetically Modified (microbiology), Spermidine Synthase (genetics), Spermidine Synthase (metabolism), Stress, Physiological, Transcription Factors (metabolism), Transcriptome, Xanthomonas.
- MESH :
- chemical , genetics : Spermidine Synthase.
- chemical , metabolism : Spermidine Synthase, Transcription Factors.
- chemical : DNA Primers.
- genetics : Citrus, Disease Resistance, Plant Diseases, Plants, Genetically Modified.
- metabolism : Cell Wall, Plant Leaves.
- microbiology : Citrus, Plant Diseases, Plants, Genetically Modified.
- Gene Expression Profiling, Gene Expression Regulation, Plant, Genetic Engineering, Oligonucleotide Array Sequence Analysis, Stress, Physiological, Transcriptome, Xanthomonas.
Abstract
Citrus canker disease caused by
Url:
DOI: 10.1155/2013/918136
PubMed: 23509803
PubMed Central: 3591164
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (<italic>Citrus sinensis</italic> Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene</title><author><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712</wicri:regionArea><wicri:noRegion>Chongqing 400712</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23509803</idno><idno type="pmc">3591164</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3591164</idno><idno type="RBID">PMC:3591164</idno><idno type="doi">10.1155/2013/918136</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000E45</idno><idno type="wicri:Area/Pmc/Curation">000E44</idno><idno type="wicri:Area/Pmc/Checkpoint">000B97</idno><idno type="wicri:source">PubMed</idno><idno type="wicri:Area/PubMed/Corpus">000506</idno><idno type="wicri:Area/PubMed/Curation">000506</idno><idno type="wicri:Area/PubMed/Checkpoint">000506</idno><idno type="wicri:Area/Ncbi/Merge">001243</idno><idno type="wicri:Area/Ncbi/Curation">001243</idno><idno type="wicri:Area/Ncbi/Checkpoint">001243</idno><idno type="wicri:doubleKey">2314-6133:2012:Fu X:transcriptional:profiling:of</idno><idno type="wicri:Area/Main/Merge">001176</idno><idno type="wicri:Area/Main/Curation">001164</idno><idno type="wicri:Area/Main/Exploration">001164</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Transcriptional Profiling of Canker-Resistant Transgenic Sweet Orange (<italic>Citrus sinensis</italic> Osbeck) Constitutively Overexpressing a Spermidine Synthase Gene</title><author><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I2">Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Citrus Research Institute, Chinese Academy of Agricultural Sciences, Southwest University, Chongqing 400712</wicri:regionArea><wicri:noRegion>Chongqing 400712</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name><affiliation wicri:level="1"><nlm:aff id="I1">Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (MOE), National Key Laboratory of Crop Genetic Improvement, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan 430070</wicri:regionArea><wicri:noRegion>Wuhan 430070</wicri:noRegion></affiliation></author></analytic><series><title level="j">BioMed Research International</title><idno type="ISSN">2314-6133</idno><idno type="eISSN">2314-6141</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cell Wall (metabolism)</term><term>Citrus (genetics)</term><term>Citrus (microbiology)</term><term>DNA Primers</term><term>Disease Resistance (genetics)</term><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Plant</term><term>Genetic Engineering</term><term>Oligonucleotide Array Sequence Analysis</term><term>Plant Diseases (genetics)</term><term>Plant Diseases (microbiology)</term><term>Plant Leaves (metabolism)</term><term>Plants, Genetically Modified (genetics)</term><term>Plants, Genetically Modified (microbiology)</term><term>Spermidine Synthase (genetics)</term><term>Spermidine Synthase (metabolism)</term><term>Stress, Physiological</term><term>Transcription Factors (metabolism)</term><term>Transcriptome</term><term>Xanthomonas</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Spermidine Synthase</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Spermidine Synthase</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA Primers</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Citrus</term><term>Disease Resistance</term><term>Plant Diseases</term><term>Plants, Genetically Modified</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Wall</term><term>Plant Leaves</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Citrus</term><term>Plant Diseases</term><term>Plants, Genetically Modified</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Plant</term><term>Genetic Engineering</term><term>Oligonucleotide Array Sequence Analysis</term><term>Stress, Physiological</term><term>Transcriptome</term><term>Xanthomonas</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Citrus canker disease caused by <italic>Xanthomonas citri</italic> subsp. <italic>citri</italic> (Xcc) is one of the most devastating diseases affecting the citrus industry worldwide. In our previous study, the canker-resistant transgenic sweet orange (<italic>Citrus sinensis</italic> Osbeck) plants were produced <italic>via</italic> constitutively overexpressing a spermidine synthase. To unravel the molecular mechanisms underlying Xcc resistance of the transgenic plants, in the present study global transcriptional profiling was compared between untransformed line (WT) and the transgenic line (TG9) by hybridizing with Affymetrix Citrus GeneChip. In total, 666 differentially expressed genes (DEGs) were identified, 448 upregulated, and 218 downregulated. The DEGs were classified into 33 categories after Gene ontology (GO) annotation, in which 68 genes are in response to stimulus and involved in immune system process, 12 genes are related to cell wall, and 13 genes belong to transcription factors. These genes and those related to starch and sucrose metabolism, glutathione metabolism, biosynthesis of phenylpropanoids, and plant hormones were hypothesized to play major roles in the canker resistance of TG9. Semiquantitative RT-PCR analysis showed that the transcript levels of several candidate genes in TG9 were significantly higher than in WT both before and after Xcc inoculation, indicating their potential association with canker disease.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Brunings, Am" uniqKey="Brunings A">AM Brunings</name></author><author><name sortKey="Gabriel, Dw" uniqKey="Gabriel D">DW Gabriel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Graham, Jh" uniqKey="Graham J">JH Graham</name></author><author><name sortKey="Gottwald, Tr" uniqKey="Gottwald T">TR Gottwald</name></author><author><name sortKey="Cubero, J" uniqKey="Cubero J">J Cubero</name></author><author><name sortKey="Achor, Ds" uniqKey="Achor D">DS Achor</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Das, Ak" uniqKey="Das A">AK 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Werck-Reichhart</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fu, Xz" uniqKey="Fu X">XZ Fu</name></author><author><name sortKey="Gong, Xq" uniqKey="Gong X">XQ Gong</name></author><author><name sortKey="Zhang, Yx" uniqKey="Zhang Y">YX Zhang</name></author><author><name sortKey="Wang, Y" uniqKey="Wang Y">Y Wang</name></author><author><name sortKey="Liu, Jh" uniqKey="Liu J">JH Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Naoumkina, Ma" uniqKey="Naoumkina M">MA Naoumkina</name></author><author><name sortKey="Zhao, Q" uniqKey="Zhao Q">Q Zhao</name></author><author><name sortKey="Gallego Giraldo, L" uniqKey="Gallego Giraldo L">L Gallego-Giraldo</name></author><author><name sortKey="Dai, X" uniqKey="Dai X">X Dai</name></author><author><name sortKey="Zhao, Px" uniqKey="Zhao P">PX Zhao</name></author><author><name sortKey="Dixon, Ra" uniqKey="Dixon R">RA Dixon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bari, R" uniqKey="Bari R">R Bari</name></author><author><name sortKey="Jones, Jdg" uniqKey="Jones J">JDG Jones</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name></noRegion><name sortKey="Fu, Xing Zheng" sort="Fu, Xing Zheng" uniqKey="Fu X" first="Xing-Zheng" last="Fu">Xing-Zheng Fu</name><name sortKey="Liu, Ji Hong" sort="Liu, Ji Hong" uniqKey="Liu J" first="Ji-Hong" last="Liu">Ji-Hong Liu</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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