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Phylogenetic lineages in the Capnodiales

Identifieur interne : 001D34 ( Main/Curation ); précédent : 001D33; suivant : 001D35

Phylogenetic lineages in the Capnodiales

Auteurs : P. W. Crous ; C. L. Schoch ; K. D. Hyde ; A. R. Wood ; C. Gueidan ; G. S. De Hoog ; J. Z. Groenewald

Source :

Studies in Mycology [ 0166-0616 ] ; 2009.

RBID : PMC:2816965

Abstract

The Capnodiales incorporates plant and human pathogens, endophytes, saprobes and epiphytes, with a wide range of nutritional modes. Several species are lichenised, or occur as parasites on fungi, or animals. The aim of the present study was to use DNA sequence data of the nuclear ribosomal small and large subunit RNA genes to test the monophyly of the Capnodiales, and resolve families within the order. We designed primers to allow the amplification and sequencing of almost the complete nuclear ribosomal small and large subunit RNA genes. Other than the Capnodiaceae (sooty moulds), and the Davidiellaceae, which contains saprobes and plant pathogens, the order presently incorporates families of major plant pathological importance such as the Mycosphaerellaceae, Teratosphaeriaceae and Schizothyriaceae. The Piedraiaceae was not supported, but resolves in the Teratosphaeriaceae. The Dissoconiaceae is introduced as a new family to accommodate Dissoconium and Ramichloridium. Lichenisation, as well as the ability to be saprobic or plant pathogenic evolved more than once in several families, though the taxa in the upper clades of the tree lead us to conclude that the strictly plant pathogenic, nectrotrophic families evolved from saprobic ancestors (Capnodiaceae), which is the more primitive state.

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2816965

DOI: 10.3114/sim.2009.64.02
PubMed: 20169022
PubMed Central: 2816965

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Le document en format XML

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<author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="aff2"><italic>Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands</italic>
</nlm:aff>
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<author><name sortKey="Schoch, C L" sort="Schoch, C L" uniqKey="Schoch C" first="C. L." last="Schoch">C. L. Schoch</name>
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<front><div type="abstract" xml:lang="en"><p>The <italic>Capnodiales</italic> incorporates plant and human pathogens,
 endophytes, saprobes and epiphytes, with a wide range of nutritional modes.
 Several species are lichenised, or occur as parasites on fungi, or animals.
 The aim of the present study was to use DNA sequence data of the nuclear
 ribosomal small and large subunit RNA genes to test the monophyly of the
 <italic>Capnodiales</italic>, and resolve families within the order. We designed
 primers to allow the amplification and sequencing of almost the complete
 nuclear ribosomal small and large subunit RNA genes. Other than the
 <italic>Capnodiaceae</italic>
 (sooty moulds), and the <italic>Davidiellaceae</italic>, which
 contains saprobes and plant pathogens, the order presently incorporates
 families of major plant pathological importance such as the
 <italic>Mycosphaerellaceae</italic>
, <italic>Teratosphaeriaceae</italic> and
 <italic>Schizothyriaceae</italic>
. The <italic>Piedraiaceae</italic> was not supported, but
 resolves in the <italic>Teratosphaeriaceae</italic>
. The <italic>Dissoconiaceae</italic> is
 introduced as a new family to accommodate <italic>Dissoconium</italic> and
 <italic>Ramichloridium</italic>. Lichenisation, as well as the ability to be saprobic
 or plant pathogenic evolved more than once in several families, though the
 taxa in the upper clades of the tree lead us to conclude that the strictly
 plant pathogenic, nectrotrophic families evolved from saprobic ancestors
 (<italic>Capnodiaceae</italic>
), which is the more primitive state.</p>
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Phylogenetic lineages in the Capnodiales

Phylogenetic lineages in the Capnodiales

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Abstract

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