Fungal transcript pattern during the preinfection stage (12 h) of ectomycorrhiza formed between Pisolithus tinctorius and Castanea sativa roots, identified using cDNA microarrays.
Identifieur interne : 002D09 ( Main/Exploration ); précédent : 002D08; suivant : 002D10Fungal transcript pattern during the preinfection stage (12 h) of ectomycorrhiza formed between Pisolithus tinctorius and Castanea sativa roots, identified using cDNA microarrays.
Auteurs : Bartolomeu Acioli-Santos [Brésil] ; M Nica Sebastiana ; Fernando Pessoa ; Lisete Sousa ; Andreia Figueiredo ; Ana Margarida Fortes ; Aladje Baldé ; Leonor C. Maia ; Maria S. PaisSource :
- Current microbiology [ 1432-0991 ] ; 2008.
Descripteurs français
- KwdFr :
- ARN fongique (biosynthèse), Analyse de profil d'expression de gènes (MeSH), Basidiomycota (croissance et développement), Basidiomycota (génétique), Fagaceae (microbiologie), Mycorhizes (croissance et développement), Mycorhizes (génétique), Protéines fongiques (biosynthèse), Racines de plante (microbiologie), Séquençage par oligonucléotides en batterie (MeSH), Étiquettes de séquences exprimées (MeSH).
- MESH :
- biosynthèse : ARN fongique, Protéines fongiques.
- croissance et développement : Basidiomycota, Mycorhizes.
- génétique : Basidiomycota, Mycorhizes.
- microbiologie : Fagaceae, Racines de plante.
- Analyse de profil d'expression de gènes, Séquençage par oligonucléotides en batterie, Étiquettes de séquences exprimées.
English descriptors
- KwdEn :
- Basidiomycota (genetics), Basidiomycota (growth & development), Expressed Sequence Tags (MeSH), Fagaceae (microbiology), Fungal Proteins (biosynthesis), Gene Expression Profiling (MeSH), Mycorrhizae (genetics), Mycorrhizae (growth & development), Oligonucleotide Array Sequence Analysis (MeSH), Plant Roots (microbiology), RNA, Fungal (biosynthesis).
- MESH :
- chemical , biosynthesis : Fungal Proteins, RNA, Fungal.
- genetics : Basidiomycota, Mycorrhizae.
- growth & development : Basidiomycota, Mycorrhizae.
- microbiology : Fagaceae, Plant Roots.
- Expressed Sequence Tags, Gene Expression Profiling, Oligonucleotide Array Sequence Analysis.
Abstract
Transcriptional changes in Pisolithus tinctorius leading to ectomycorrhizal formation in P. tinctorius- Castanea sativa were investigated using a 12-h fungal interaction in vitro system. Using a 3107-cDNA clone microarray, 34 unique expressed sequence tags (ESTs) were found to be differentially expressed. These ESTs represent 14 known genes, 5 upregulated and 9 downregulated, and 20 orphan sequences. Some transcripts of upregulated genes (with unknown function) were previously identified in other mycorrhizal Pisolithus spp. associations. ESTs for S-adenosyl-L-homocysteine hydrolase and several orphan sequences were identified in our system. The identified transcript of downregulated genes involved hydrophobins, 5S, 18S, and 28S ribosomal RNA genes, large subunits of ribosomal RNA (mitochondrial gene), and two types of heat shock proteins. This study demonstrates the high complexity of molecular events involved in the preinfection steps and suggests the utilization of different fungal gene repertories before ectomycorrhizal formation. These data constitute a first contribution for the molecular understanding of early signaling events between P. tinctorius and C. sativa roots during ectomycorrhizal formation.
DOI: 10.1007/s00284-008-9253-2
PubMed: 18836771
Affiliations:
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Maia</name></author><author><name sortKey="Pais, Maria S" sort="Pais, Maria S" uniqKey="Pais M" first="Maria S" last="Pais">Maria S. Pais</name></author></analytic><series><title level="j">Current microbiology</title><idno type="eISSN">1432-0991</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basidiomycota (genetics)</term><term>Basidiomycota (growth & development)</term><term>Expressed Sequence Tags (MeSH)</term><term>Fagaceae (microbiology)</term><term>Fungal Proteins (biosynthesis)</term><term>Gene Expression Profiling (MeSH)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (growth & development)</term><term>Oligonucleotide Array Sequence Analysis (MeSH)</term><term>Plant Roots (microbiology)</term><term>RNA, Fungal (biosynthesis)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN fongique (biosynthèse)</term><term>Analyse de profil d'expression de gènes (MeSH)</term><term>Basidiomycota (croissance et développement)</term><term>Basidiomycota (génétique)</term><term>Fagaceae (microbiologie)</term><term>Mycorhizes (croissance et développement)</term><term>Mycorhizes (génétique)</term><term>Protéines fongiques (biosynthèse)</term><term>Racines de plante (microbiologie)</term><term>Séquençage par oligonucléotides en batterie (MeSH)</term><term>Étiquettes de séquences exprimées (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="biosynthesis" xml:lang="en"><term>Fungal Proteins</term><term>RNA, Fungal</term></keywords><keywords scheme="MESH" qualifier="biosynthèse" xml:lang="fr"><term>ARN fongique</term><term>Protéines fongiques</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Basidiomycota</term><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Basidiomycota</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Basidiomycota</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Basidiomycota</term><term>Mycorhizes</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Fagaceae</term><term>Racines de plante</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Fagaceae</term><term>Plant Roots</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Expressed Sequence Tags</term><term>Gene Expression Profiling</term><term>Oligonucleotide Array Sequence Analysis</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de profil d'expression de gènes</term><term>Séquençage par oligonucléotides en batterie</term><term>Étiquettes de séquences exprimées</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Transcriptional changes in Pisolithus tinctorius leading to ectomycorrhizal formation in P. tinctorius- Castanea sativa were investigated using a 12-h fungal interaction in vitro system. Using a 3107-cDNA clone microarray, 34 unique expressed sequence tags (ESTs) were found to be differentially expressed. These ESTs represent 14 known genes, 5 upregulated and 9 downregulated, and 20 orphan sequences. Some transcripts of upregulated genes (with unknown function) were previously identified in other mycorrhizal Pisolithus spp. associations. ESTs for S-adenosyl-L-homocysteine hydrolase and several orphan sequences were identified in our system. The identified transcript of downregulated genes involved hydrophobins, 5S, 18S, and 28S ribosomal RNA genes, large subunits of ribosomal RNA (mitochondrial gene), and two types of heat shock proteins. This study demonstrates the high complexity of molecular events involved in the preinfection steps and suggests the utilization of different fungal gene repertories before ectomycorrhizal formation. These data constitute a first contribution for the molecular understanding of early signaling events between P. tinctorius and C. sativa roots during ectomycorrhizal formation.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18836771</PMID><DateCompleted><Year>2009</Year><Month>01</Month><Day>29</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-0991</ISSN><JournalIssue CitedMedium="Internet"><Volume>57</Volume><Issue>6</Issue><PubDate><Year>2008</Year><Month>Dec</Month></PubDate></JournalIssue><Title>Current microbiology</Title><ISOAbbreviation>Curr Microbiol</ISOAbbreviation></Journal><ArticleTitle>Fungal transcript pattern during the preinfection stage (12 h) of ectomycorrhiza formed between Pisolithus tinctorius and Castanea sativa roots, identified using cDNA microarrays.</ArticleTitle><Pagination><MedlinePgn>620-5</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00284-008-9253-2</ELocationID><Abstract><AbstractText>Transcriptional changes in Pisolithus tinctorius leading to ectomycorrhizal formation in P. tinctorius- Castanea sativa were investigated using a 12-h fungal interaction in vitro system. Using a 3107-cDNA clone microarray, 34 unique expressed sequence tags (ESTs) were found to be differentially expressed. These ESTs represent 14 known genes, 5 upregulated and 9 downregulated, and 20 orphan sequences. Some transcripts of upregulated genes (with unknown function) were previously identified in other mycorrhizal Pisolithus spp. associations. ESTs for S-adenosyl-L-homocysteine hydrolase and several orphan sequences were identified in our system. The identified transcript of downregulated genes involved hydrophobins, 5S, 18S, and 28S ribosomal RNA genes, large subunits of ribosomal RNA (mitochondrial gene), and two types of heat shock proteins. This study demonstrates the high complexity of molecular events involved in the preinfection steps and suggests the utilization of different fungal gene repertories before ectomycorrhizal formation. These data constitute a first contribution for the molecular understanding of early signaling events between P. tinctorius and C. sativa roots during ectomycorrhizal formation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Acioli-Santos</LastName><ForeName>Bartolomeu</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Laboratório micorrizas, Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Brazil. bartacioli@yahoo.com</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sebastiana</LastName><ForeName>Mónica</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Pessoa</LastName><ForeName>Fernando</ForeName><Initials>F</Initials></Author><Author ValidYN="Y"><LastName>Sousa</LastName><ForeName>Lisete</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Figueiredo</LastName><ForeName>Andreia</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Fortes</LastName><ForeName>Ana Margarida</ForeName><Initials>AM</Initials></Author><Author ValidYN="Y"><LastName>Baldé</LastName><ForeName>Aladje</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Maia</LastName><ForeName>Leonor C</ForeName><Initials>LC</Initials></Author><Author ValidYN="Y"><LastName>Pais</LastName><ForeName>Maria S</ForeName><Initials>MS</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>10</Month><Day>04</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Curr Microbiol</MedlineTA><NlmUniqueID>7808448</NlmUniqueID><ISSNLinking>0343-8651</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012331">RNA, Fungal</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020224" MajorTopicYN="N">Expressed Sequence Tags</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D029962" MajorTopicYN="N">Fagaceae</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName><QualifierName UI="Q000096" MajorTopicYN="N">biosynthesis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020869" MajorTopicYN="Y">Gene Expression Profiling</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020411" MajorTopicYN="Y">Oligonucleotide Array Sequence Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012331" MajorTopicYN="N">RNA, Fungal</DescriptorName><QualifierName UI="Q000096" MajorTopicYN="N">biosynthesis</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2008</Year><Month>05</Month><Day>29</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2008</Year><Month>07</Month><Day>14</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2008</Year><Month>10</Month><Day>7</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2009</Year><Month>1</Month><Day>30</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2008</Year><Month>10</Month><Day>7</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">18836771</ArticleId><ArticleId IdType="doi">10.1007/s00284-008-9253-2</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Proc Natl Acad Sci U S A. 1992 May 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Andreia" uniqKey="Figueiredo A" first="Andreia" last="Figueiredo">Andreia Figueiredo</name><name sortKey="Fortes, Ana Margarida" sort="Fortes, Ana Margarida" uniqKey="Fortes A" first="Ana Margarida" last="Fortes">Ana Margarida Fortes</name><name sortKey="Maia, Leonor C" sort="Maia, Leonor C" uniqKey="Maia L" first="Leonor C" last="Maia">Leonor C. Maia</name><name sortKey="Pais, Maria S" sort="Pais, Maria S" uniqKey="Pais M" first="Maria S" last="Pais">Maria S. Pais</name><name sortKey="Pessoa, Fernando" sort="Pessoa, Fernando" uniqKey="Pessoa F" first="Fernando" last="Pessoa">Fernando Pessoa</name><name sortKey="Sebastiana, M Nica" sort="Sebastiana, M Nica" uniqKey="Sebastiana M" first="M Nica" last="Sebastiana">M Nica Sebastiana</name><name sortKey="Sousa, Lisete" sort="Sousa, Lisete" uniqKey="Sousa L" first="Lisete" last="Sousa">Lisete Sousa</name></noCountry><country name="Brésil"><noRegion><name sortKey="Acioli Santos, Bartolomeu" sort="Acioli Santos, Bartolomeu" uniqKey="Acioli Santos B" first="Bartolomeu" last="Acioli-Santos">Bartolomeu Acioli-Santos</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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