MycorrhizaeV1, Main, Corpus, bibRecord, 000F42

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

Identifieur interne : 000F42 ( Main/Corpus ); précédent : 000F41; suivant : 000F43

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

Auteurs : Martina Peter ; Annegret Kohler ; Robin A. Ohm ; Alan Kuo ; Jennifer Krützmann ; Emmanuelle Morin ; Matthias Arend ; Kerrie W. Barry ; Manfred Binder ; Cindy Choi ; Alicia Clum ; Alex Copeland ; Nadine Grisel ; Sajeet Haridas ; Tabea Kipfer ; Kurt Labutti ; Erika Lindquist ; Anna Lipzen ; Renaud Maire ; Barbara Meier ; Sirma Mihaltcheva ; Virginie Molinier ; Claude Murat ; Stefanie Pöggeler ; C Alisha Quandt ; Christoph Sperisen ; Andrew Tritt ; Emilie Tisserant ; Pedro W. Crous ; Bernard Henrissat ; Uwe Nehls ; Simon Egli ; Joseph W. Spatafora ; Igor V. Grigoriev ; Francis M. Martin

Source :

Nature communications [ 2041-1723 ] ; 2016.

RBID : pubmed:27601008

English descriptors

KwdEn :
- Aquaporins (metabolism), Ascomycota (genetics), Basidiomycota (genetics), DNA, Fungal (genetics), Ecosystem (MeSH), Fungal Proteins (MeSH), Gene Expression Regulation, Fungal (MeSH), Genome, Fungal (MeSH), Mycorrhizae (genetics), Mycorrhizae (physiology), Phylogeny (MeSH), Pinus sylvestris (microbiology), Plant Roots (microbiology), Transcriptome (MeSH), Water (MeSH).
MESH :
- chemical , genetics : DNA, Fungal.
- chemical , metabolism : Aquaporins.
- genetics : Ascomycota, Basidiomycota, Mycorrhizae.
- microbiology : Pinus sylvestris, Plant Roots.
- physiology : Mycorrhizae.
- Ecosystem, Fungal Proteins, Gene Expression Regulation, Fungal, Genome, Fungal, Phylogeny, Transcriptome, Water.

Abstract

The most frequently encountered symbiont on tree roots is the ascomycete Cenococcum geophilum, the only mycorrhizal species within the largest fungal class Dothideomycetes, a class known for devastating plant pathogens. Here we show that the symbiotic genomic idiosyncrasies of ectomycorrhizal basidiomycetes are also present in C. geophilum with symbiosis-induced, taxon-specific genes of unknown function and reduced numbers of plant cell wall-degrading enzymes. C. geophilum still holds a significant set of genes in categories known to be involved in pathogenesis and shows an increased genome size due to transposable elements proliferation. Transcript profiling revealed a striking upregulation of membrane transporters, including aquaporin water channels and sugar transporters, and mycorrhiza-induced small secreted proteins (MiSSPs) in ectomycorrhiza compared with free-living mycelium. The frequency with which this symbiont is found on tree roots and its possible role in water and nutrient transport in symbiosis calls for further studies on mechanisms of host and environmental adaptation.

DOI: 10.1038/ncomms12662
PubMed: 27601008
PubMed Central: PMC5023957

Links to Exploration step

pubmed:27601008

Le document en format XML

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<author><name sortKey="Peter, Martina" sort="Peter, Martina" uniqKey="Peter M" first="Martina" last="Peter">Martina Peter</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
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<author><name sortKey="Kohler, Annegret" sort="Kohler, Annegret" uniqKey="Kohler A" first="Annegret" last="Kohler">Annegret Kohler</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Ohm, Robin A" sort="Ohm, Robin A" uniqKey="Ohm R" first="Robin A" last="Ohm">Robin A. Ohm</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Microbiology, Department of Biology, Utrecht University, 3508 TB Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
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<author><name sortKey="Kuo, Alan" sort="Kuo, Alan" uniqKey="Kuo A" first="Alan" last="Kuo">Alan Kuo</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
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<author><name sortKey="Krutzmann, Jennifer" sort="Krutzmann, Jennifer" uniqKey="Krutzmann J" first="Jennifer" last="Krützmann">Jennifer Krützmann</name>
<affiliation><nlm:affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Morin, Emmanuelle" sort="Morin, Emmanuelle" uniqKey="Morin E" first="Emmanuelle" last="Morin">Emmanuelle Morin</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Arend, Matthias" sort="Arend, Matthias" uniqKey="Arend M" first="Matthias" last="Arend">Matthias Arend</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
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<author><name sortKey="Barry, Kerrie W" sort="Barry, Kerrie W" uniqKey="Barry K" first="Kerrie W" last="Barry">Kerrie W. Barry</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
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<author><name sortKey="Binder, Manfred" sort="Binder, Manfred" uniqKey="Binder M" first="Manfred" last="Binder">Manfred Binder</name>
<affiliation><nlm:affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Choi, Cindy" sort="Choi, Cindy" uniqKey="Choi C" first="Cindy" last="Choi">Cindy Choi</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Clum, Alicia" sort="Clum, Alicia" uniqKey="Clum A" first="Alicia" last="Clum">Alicia Clum</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
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<author><name sortKey="Copeland, Alex" sort="Copeland, Alex" uniqKey="Copeland A" first="Alex" last="Copeland">Alex Copeland</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Grisel, Nadine" sort="Grisel, Nadine" uniqKey="Grisel N" first="Nadine" last="Grisel">Nadine Grisel</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Haridas, Sajeet" sort="Haridas, Sajeet" uniqKey="Haridas S" first="Sajeet" last="Haridas">Sajeet Haridas</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Kipfer, Tabea" sort="Kipfer, Tabea" uniqKey="Kipfer T" first="Tabea" last="Kipfer">Tabea Kipfer</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Labutti, Kurt" sort="Labutti, Kurt" uniqKey="Labutti K" first="Kurt" last="Labutti">Kurt Labutti</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Lindquist, Erika" sort="Lindquist, Erika" uniqKey="Lindquist E" first="Erika" last="Lindquist">Erika Lindquist</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Lipzen, Anna" sort="Lipzen, Anna" uniqKey="Lipzen A" first="Anna" last="Lipzen">Anna Lipzen</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Maire, Renaud" sort="Maire, Renaud" uniqKey="Maire R" first="Renaud" last="Maire">Renaud Maire</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Meier, Barbara" sort="Meier, Barbara" uniqKey="Meier B" first="Barbara" last="Meier">Barbara Meier</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Mihaltcheva, Sirma" sort="Mihaltcheva, Sirma" uniqKey="Mihaltcheva S" first="Sirma" last="Mihaltcheva">Sirma Mihaltcheva</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Molinier, Virginie" sort="Molinier, Virginie" uniqKey="Molinier V" first="Virginie" last="Molinier">Virginie Molinier</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Murat, Claude" sort="Murat, Claude" uniqKey="Murat C" first="Claude" last="Murat">Claude Murat</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Poggeler, Stefanie" sort="Poggeler, Stefanie" uniqKey="Poggeler S" first="Stefanie" last="Pöggeler">Stefanie Pöggeler</name>
<affiliation><nlm:affiliation>Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms, Georg-August-University Göttingen, 37077 Göttingen, Germany.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Göttingen Center for Molecular Biosciences (GZMB), Georg-August-University Göttingen, 37077 Göttingen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Quandt, C Alisha" sort="Quandt, C Alisha" uniqKey="Quandt C" first="C Alisha" last="Quandt">C Alisha Quandt</name>
<affiliation><nlm:affiliation>Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109 USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Sperisen, Christoph" sort="Sperisen, Christoph" uniqKey="Sperisen C" first="Christoph" last="Sperisen">Christoph Sperisen</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Tritt, Andrew" sort="Tritt, Andrew" uniqKey="Tritt A" first="Andrew" last="Tritt">Andrew Tritt</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Tisserant, Emilie" sort="Tisserant, Emilie" uniqKey="Tisserant E" first="Emilie" last="Tisserant">Emilie Tisserant</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Crous, Pedro W" sort="Crous, Pedro W" uniqKey="Crous P" first="Pedro W" last="Crous">Pedro W. Crous</name>
<affiliation><nlm:affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Henrissat, Bernard" sort="Henrissat, Bernard" uniqKey="Henrissat B" first="Bernard" last="Henrissat">Bernard Henrissat</name>
<affiliation><nlm:affiliation>Centre National de la Recherche Scientifique, UMR 7257, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille University, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>INRA, USC 1408 AFMB, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Department of Biological Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Nehls, Uwe" sort="Nehls, Uwe" uniqKey="Nehls U" first="Uwe" last="Nehls">Uwe Nehls</name>
<affiliation><nlm:affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Egli, Simon" sort="Egli, Simon" uniqKey="Egli S" first="Simon" last="Egli">Simon Egli</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Spatafora, Joseph W" sort="Spatafora, Joseph W" uniqKey="Spatafora J" first="Joseph W" last="Spatafora">Joseph W. Spatafora</name>
<affiliation><nlm:affiliation>Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331 USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Grigoriev, Igor V" sort="Grigoriev, Igor V" uniqKey="Grigoriev I" first="Igor V" last="Grigoriev">Igor V. Grigoriev</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Martin, Francis M" sort="Martin, Francis M" uniqKey="Martin F" first="Francis M" last="Martin">Francis M. Martin</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
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<date when="2016">2016</date>
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<idno type="pmid">27601008</idno>
<idno type="doi">10.1038/ncomms12662</idno>
<idno type="pmc">PMC5023957</idno>
<idno type="wicri:Area/Main/Corpus">000F42</idno>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.</title>
<author><name sortKey="Peter, Martina" sort="Peter, Martina" uniqKey="Peter M" first="Martina" last="Peter">Martina Peter</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Kohler, Annegret" sort="Kohler, Annegret" uniqKey="Kohler A" first="Annegret" last="Kohler">Annegret Kohler</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Ohm, Robin A" sort="Ohm, Robin A" uniqKey="Ohm R" first="Robin A" last="Ohm">Robin A. Ohm</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Microbiology, Department of Biology, Utrecht University, 3508 TB Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Kuo, Alan" sort="Kuo, Alan" uniqKey="Kuo A" first="Alan" last="Kuo">Alan Kuo</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Krutzmann, Jennifer" sort="Krutzmann, Jennifer" uniqKey="Krutzmann J" first="Jennifer" last="Krützmann">Jennifer Krützmann</name>
<affiliation><nlm:affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Morin, Emmanuelle" sort="Morin, Emmanuelle" uniqKey="Morin E" first="Emmanuelle" last="Morin">Emmanuelle Morin</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Arend, Matthias" sort="Arend, Matthias" uniqKey="Arend M" first="Matthias" last="Arend">Matthias Arend</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Barry, Kerrie W" sort="Barry, Kerrie W" uniqKey="Barry K" first="Kerrie W" last="Barry">Kerrie W. Barry</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Binder, Manfred" sort="Binder, Manfred" uniqKey="Binder M" first="Manfred" last="Binder">Manfred Binder</name>
<affiliation><nlm:affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Choi, Cindy" sort="Choi, Cindy" uniqKey="Choi C" first="Cindy" last="Choi">Cindy Choi</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Clum, Alicia" sort="Clum, Alicia" uniqKey="Clum A" first="Alicia" last="Clum">Alicia Clum</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Copeland, Alex" sort="Copeland, Alex" uniqKey="Copeland A" first="Alex" last="Copeland">Alex Copeland</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Grisel, Nadine" sort="Grisel, Nadine" uniqKey="Grisel N" first="Nadine" last="Grisel">Nadine Grisel</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Haridas, Sajeet" sort="Haridas, Sajeet" uniqKey="Haridas S" first="Sajeet" last="Haridas">Sajeet Haridas</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Kipfer, Tabea" sort="Kipfer, Tabea" uniqKey="Kipfer T" first="Tabea" last="Kipfer">Tabea Kipfer</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Labutti, Kurt" sort="Labutti, Kurt" uniqKey="Labutti K" first="Kurt" last="Labutti">Kurt Labutti</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Lindquist, Erika" sort="Lindquist, Erika" uniqKey="Lindquist E" first="Erika" last="Lindquist">Erika Lindquist</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Lipzen, Anna" sort="Lipzen, Anna" uniqKey="Lipzen A" first="Anna" last="Lipzen">Anna Lipzen</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Maire, Renaud" sort="Maire, Renaud" uniqKey="Maire R" first="Renaud" last="Maire">Renaud Maire</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Meier, Barbara" sort="Meier, Barbara" uniqKey="Meier B" first="Barbara" last="Meier">Barbara Meier</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Mihaltcheva, Sirma" sort="Mihaltcheva, Sirma" uniqKey="Mihaltcheva S" first="Sirma" last="Mihaltcheva">Sirma Mihaltcheva</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Molinier, Virginie" sort="Molinier, Virginie" uniqKey="Molinier V" first="Virginie" last="Molinier">Virginie Molinier</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Murat, Claude" sort="Murat, Claude" uniqKey="Murat C" first="Claude" last="Murat">Claude Murat</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Poggeler, Stefanie" sort="Poggeler, Stefanie" uniqKey="Poggeler S" first="Stefanie" last="Pöggeler">Stefanie Pöggeler</name>
<affiliation><nlm:affiliation>Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms, Georg-August-University Göttingen, 37077 Göttingen, Germany.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Göttingen Center for Molecular Biosciences (GZMB), Georg-August-University Göttingen, 37077 Göttingen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Quandt, C Alisha" sort="Quandt, C Alisha" uniqKey="Quandt C" first="C Alisha" last="Quandt">C Alisha Quandt</name>
<affiliation><nlm:affiliation>Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109 USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Sperisen, Christoph" sort="Sperisen, Christoph" uniqKey="Sperisen C" first="Christoph" last="Sperisen">Christoph Sperisen</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Tritt, Andrew" sort="Tritt, Andrew" uniqKey="Tritt A" first="Andrew" last="Tritt">Andrew Tritt</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Tisserant, Emilie" sort="Tisserant, Emilie" uniqKey="Tisserant E" first="Emilie" last="Tisserant">Emilie Tisserant</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Crous, Pedro W" sort="Crous, Pedro W" uniqKey="Crous P" first="Pedro W" last="Crous">Pedro W. Crous</name>
<affiliation><nlm:affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Henrissat, Bernard" sort="Henrissat, Bernard" uniqKey="Henrissat B" first="Bernard" last="Henrissat">Bernard Henrissat</name>
<affiliation><nlm:affiliation>Centre National de la Recherche Scientifique, UMR 7257, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille University, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>INRA, USC 1408 AFMB, F-13288 Marseille, France.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Department of Biological Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Nehls, Uwe" sort="Nehls, Uwe" uniqKey="Nehls U" first="Uwe" last="Nehls">Uwe Nehls</name>
<affiliation><nlm:affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Egli, Simon" sort="Egli, Simon" uniqKey="Egli S" first="Simon" last="Egli">Simon Egli</name>
<affiliation><nlm:affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Spatafora, Joseph W" sort="Spatafora, Joseph W" uniqKey="Spatafora J" first="Joseph W" last="Spatafora">Joseph W. Spatafora</name>
<affiliation><nlm:affiliation>Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331 USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Grigoriev, Igor V" sort="Grigoriev, Igor V" uniqKey="Grigoriev I" first="Igor V" last="Grigoriev">Igor V. Grigoriev</name>
<affiliation><nlm:affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Martin, Francis M" sort="Martin, Francis M" uniqKey="Martin F" first="Francis M" last="Martin">Francis M. Martin</name>
<affiliation><nlm:affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</nlm:affiliation>
</affiliation>
</author>
</analytic>
<series><title level="j">Nature communications</title>
<idno type="eISSN">2041-1723</idno>
<imprint><date when="2016" type="published">2016</date>
</imprint>
</series>
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<term>Ascomycota (genetics)</term>
<term>Basidiomycota (genetics)</term>
<term>DNA, Fungal (genetics)</term>
<term>Ecosystem (MeSH)</term>
<term>Fungal Proteins (MeSH)</term>
<term>Gene Expression Regulation, Fungal (MeSH)</term>
<term>Genome, Fungal (MeSH)</term>
<term>Mycorrhizae (genetics)</term>
<term>Mycorrhizae (physiology)</term>
<term>Phylogeny (MeSH)</term>
<term>Pinus sylvestris (microbiology)</term>
<term>Plant Roots (microbiology)</term>
<term>Transcriptome (MeSH)</term>
<term>Water (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Aquaporins</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Ascomycota</term>
<term>Basidiomycota</term>
<term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Pinus sylvestris</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Ecosystem</term>
<term>Fungal Proteins</term>
<term>Gene Expression Regulation, Fungal</term>
<term>Genome, Fungal</term>
<term>Phylogeny</term>
<term>Transcriptome</term>
<term>Water</term>
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<front><div type="abstract" xml:lang="en">The most frequently encountered symbiont on tree roots is the ascomycete Cenococcum geophilum, the only mycorrhizal species within the largest fungal class Dothideomycetes, a class known for devastating plant pathogens. Here we show that the symbiotic genomic idiosyncrasies of ectomycorrhizal basidiomycetes are also present in C. geophilum with symbiosis-induced, taxon-specific genes of unknown function and reduced numbers of plant cell wall-degrading enzymes. C. geophilum still holds a significant set of genes in categories known to be involved in pathogenesis and shows an increased genome size due to transposable elements proliferation. Transcript profiling revealed a striking upregulation of membrane transporters, including aquaporin water channels and sugar transporters, and mycorrhiza-induced small secreted proteins (MiSSPs) in ectomycorrhiza compared with free-living mycelium. The frequency with which this symbiont is found on tree roots and its possible role in water and nutrient transport in symbiosis calls for further studies on mechanisms of host and environmental adaptation.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">27601008</PMID>
<DateCompleted><Year>2018</Year>
<Month>08</Month>
<Day>23</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>05</Month>
<Day>01</Day>
</DateRevised>
<Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2041-1723</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>7</Volume>
<PubDate><Year>2016</Year>
<Month>09</Month>
<Day>07</Day>
</PubDate>
</JournalIssue>
<Title>Nature communications</Title>
<ISOAbbreviation>Nat Commun</ISOAbbreviation>
</Journal>
<ArticleTitle>Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.</ArticleTitle>
<Pagination><MedlinePgn>12662</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1038/ncomms12662</ELocationID>
<Abstract><AbstractText>The most frequently encountered symbiont on tree roots is the ascomycete Cenococcum geophilum, the only mycorrhizal species within the largest fungal class Dothideomycetes, a class known for devastating plant pathogens. Here we show that the symbiotic genomic idiosyncrasies of ectomycorrhizal basidiomycetes are also present in C. geophilum with symbiosis-induced, taxon-specific genes of unknown function and reduced numbers of plant cell wall-degrading enzymes. C. geophilum still holds a significant set of genes in categories known to be involved in pathogenesis and shows an increased genome size due to transposable elements proliferation. Transcript profiling revealed a striking upregulation of membrane transporters, including aquaporin water channels and sugar transporters, and mycorrhiza-induced small secreted proteins (MiSSPs) in ectomycorrhiza compared with free-living mycelium. The frequency with which this symbiont is found on tree roots and its possible role in water and nutrient transport in symbiosis calls for further studies on mechanisms of host and environmental adaptation.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Peter</LastName>
<ForeName>Martina</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Kohler</LastName>
<ForeName>Annegret</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ohm</LastName>
<ForeName>Robin A</ForeName>
<Initials>RA</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Microbiology, Department of Biology, Utrecht University, 3508 TB Utrecht, The Netherlands.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Kuo</LastName>
<ForeName>Alan</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Krützmann</LastName>
<ForeName>Jennifer</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Morin</LastName>
<ForeName>Emmanuelle</ForeName>
<Initials>E</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-7268-972X</Identifier>
<AffiliationInfo><Affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Arend</LastName>
<ForeName>Matthias</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Barry</LastName>
<ForeName>Kerrie W</ForeName>
<Initials>KW</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Binder</LastName>
<ForeName>Manfred</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Choi</LastName>
<ForeName>Cindy</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Clum</LastName>
<ForeName>Alicia</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Copeland</LastName>
<ForeName>Alex</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Grisel</LastName>
<ForeName>Nadine</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Haridas</LastName>
<ForeName>Sajeet</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Kipfer</LastName>
<ForeName>Tabea</ForeName>
<Initials>T</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>LaButti</LastName>
<ForeName>Kurt</ForeName>
<Initials>K</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lindquist</LastName>
<ForeName>Erika</ForeName>
<Initials>E</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lipzen</LastName>
<ForeName>Anna</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Maire</LastName>
<ForeName>Renaud</ForeName>
<Initials>R</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Meier</LastName>
<ForeName>Barbara</ForeName>
<Initials>B</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Mihaltcheva</LastName>
<ForeName>Sirma</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Molinier</LastName>
<ForeName>Virginie</ForeName>
<Initials>V</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Murat</LastName>
<ForeName>Claude</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pöggeler</LastName>
<ForeName>Stefanie</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>Institute of Microbiology and Genetics, Department of Genetics of Eukaryotic Microorganisms, Georg-August-University Göttingen, 37077 Göttingen, Germany.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Göttingen Center for Molecular Biosciences (GZMB), Georg-August-University Göttingen, 37077 Göttingen, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Quandt</LastName>
<ForeName>C Alisha</ForeName>
<Initials>CA</Initials>
<AffiliationInfo><Affiliation>Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109 USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sperisen</LastName>
<ForeName>Christoph</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tritt</LastName>
<ForeName>Andrew</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tisserant</LastName>
<ForeName>Emilie</ForeName>
<Initials>E</Initials>
<AffiliationInfo><Affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Crous</LastName>
<ForeName>Pedro W</ForeName>
<Initials>PW</Initials>
<AffiliationInfo><Affiliation>CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Henrissat</LastName>
<ForeName>Bernard</ForeName>
<Initials>B</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR 7257, F-13288 Marseille, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille University, F-13288 Marseille, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>INRA, USC 1408 AFMB, F-13288 Marseille, France.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Department of Biological Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nehls</LastName>
<ForeName>Uwe</ForeName>
<Initials>U</Initials>
<AffiliationInfo><Affiliation>University of Bremen, Botany, Leobenerstr. 2, 28359 Bremen, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Egli</LastName>
<ForeName>Simon</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111, 8903 Birmensdorf, Switzerland.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Spatafora</LastName>
<ForeName>Joseph W</ForeName>
<Initials>JW</Initials>
<AffiliationInfo><Affiliation>Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331 USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Grigoriev</LastName>
<ForeName>Igor V</ForeName>
<Initials>IV</Initials>
<AffiliationInfo><Affiliation>US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California 94598, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Martin</LastName>
<ForeName>Francis M</ForeName>
<Initials>FM</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-4737-3715</Identifier>
<AffiliationInfo><Affiliation>INRA, UMR INRA-Université de Lorraine 'Interactions Arbres/Microorganismes', Laboratoire d'Excellence ARBRE, INRA-Nancy, 54280 Champenoux, France.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
<PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2016</Year>
<Month>09</Month>
<Day>07</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Nat Commun</MedlineTA>
<NlmUniqueID>101528555</NlmUniqueID>
<ISSNLinking>2041-1723</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D020346">Aquaporins</NameOfSubstance>
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<Chemical><RegistryNumber>0</RegistryNumber>
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<Chemical><RegistryNumber>0</RegistryNumber>
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<CitationSubset>IM</CitationSubset>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017753" MajorTopicYN="Y">Ecosystem</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015966" MajorTopicYN="N">Gene Expression Regulation, Fungal</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016681" MajorTopicYN="Y">Genome, Fungal</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D041605" MajorTopicYN="N">Pinus sylvestris</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D059467" MajorTopicYN="N">Transcriptome</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014867" MajorTopicYN="N">Water</DescriptorName>
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<Month>11</Month>
<Day>04</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2016</Year>
<Month>07</Month>
<Day>21</Day>
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<PubMedPubDate PubStatus="entrez"><Year>2016</Year>
<Month>9</Month>
<Day>8</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<Month>9</Month>
<Day>8</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<Day>24</Day>
<Hour>6</Hour>
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Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

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