Distinctive Feature of Microbial Communities and Bacterial Functional Profiles in Tricholoma matsutake Dominant Soil.
Identifieur interne : 000E27 ( Main/Corpus ); précédent : 000E26; suivant : 000E28Distinctive Feature of Microbial Communities and Bacterial Functional Profiles in Tricholoma matsutake Dominant Soil.
Auteurs : Seung-Yoon Oh ; Jonathan J. Fong ; Myung Soo Park ; Young Woon LimSource :
- PloS one [ 1932-6203 ] ; 2016.
English descriptors
- KwdEn :
- MESH :
- genetics : Bacteria, Mycorrhizae.
- isolation & purification : Bacteria, Mycorrhizae.
- physiology : Tricholoma.
- Sequence Analysis, DNA, Soil Microbiology.
Abstract
Tricholoma matsutake, the pine mushroom, is a valuable forest product with high economic value in Asia, and plays an important ecological role as an ectomycorrhizal fungus. Around the host tree, T. matsutake hyphae generate a distinctive soil aggregating environment called a fairy ring, where fruiting bodies form. Because T. matsutake hyphae dominate the soil near the fairy ring, this species has the potential to influence the microbial community. To explore the influence of T. matsutake on the microbial communities, we compared the microbial community and predicted bacterial function between two different soil types-T. matsutake dominant and T. matsutake minor. DNA sequence analyses showed that fungal and bacterial diversity were lower in the T. matsutake dominant soil compared to T. matsutake minor soil. Some microbial taxa were significantly more common in the T. matsutake dominant soil across geographic locations, many of which were previously identified as mycophillic or mycorrhiza helper bacteria. Between the two soil types, the predicted bacterial functional profiles (using PICRUSt) had significantly distinct KEGG modules. Modules for amino acid uptake, carbohydrate metabolism, and the type III secretion system were higher in the T. matsutake dominant soil than in the T. matsutake minor soil. Overall, similar microbial diversity, community structure, and bacterial functional profiles of the T. matsutake dominant soil across geographic locations suggest that T. matsutake may generate a dominance effect.
DOI: 10.1371/journal.pone.0168573
PubMed: 27977803
PubMed Central: PMC5158061
Links to Exploration step
pubmed:27977803Le document en format XML
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<front><div type="abstract" xml:lang="en">Tricholoma matsutake, the pine mushroom, is a valuable forest product with high economic value in Asia, and plays an important ecological role as an ectomycorrhizal fungus. Around the host tree, T. matsutake hyphae generate a distinctive soil aggregating environment called a fairy ring, where fruiting bodies form. Because T. matsutake hyphae dominate the soil near the fairy ring, this species has the potential to influence the microbial community. To explore the influence of T. matsutake on the microbial communities, we compared the microbial community and predicted bacterial function between two different soil types-T. matsutake dominant and T. matsutake minor. DNA sequence analyses showed that fungal and bacterial diversity were lower in the T. matsutake dominant soil compared to T. matsutake minor soil. Some microbial taxa were significantly more common in the T. matsutake dominant soil across geographic locations, many of which were previously identified as mycophillic or mycorrhiza helper bacteria. Between the two soil types, the predicted bacterial functional profiles (using PICRUSt) had significantly distinct KEGG modules. Modules for amino acid uptake, carbohydrate metabolism, and the type III secretion system were higher in the T. matsutake dominant soil than in the T. matsutake minor soil. Overall, similar microbial diversity, community structure, and bacterial functional profiles of the T. matsutake dominant soil across geographic locations suggest that T. matsutake may generate a dominance effect.</div>
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<Abstract><AbstractText>Tricholoma matsutake, the pine mushroom, is a valuable forest product with high economic value in Asia, and plays an important ecological role as an ectomycorrhizal fungus. Around the host tree, T. matsutake hyphae generate a distinctive soil aggregating environment called a fairy ring, where fruiting bodies form. Because T. matsutake hyphae dominate the soil near the fairy ring, this species has the potential to influence the microbial community. To explore the influence of T. matsutake on the microbial communities, we compared the microbial community and predicted bacterial function between two different soil types-T. matsutake dominant and T. matsutake minor. DNA sequence analyses showed that fungal and bacterial diversity were lower in the T. matsutake dominant soil compared to T. matsutake minor soil. Some microbial taxa were significantly more common in the T. matsutake dominant soil across geographic locations, many of which were previously identified as mycophillic or mycorrhiza helper bacteria. Between the two soil types, the predicted bacterial functional profiles (using PICRUSt) had significantly distinct KEGG modules. Modules for amino acid uptake, carbohydrate metabolism, and the type III secretion system were higher in the T. matsutake dominant soil than in the T. matsutake minor soil. Overall, similar microbial diversity, community structure, and bacterial functional profiles of the T. matsutake dominant soil across geographic locations suggest that T. matsutake may generate a dominance effect.</AbstractText>
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<ReferenceList><Reference><Citation>Front Microbiol. 2014 Nov 11;5:598</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25426111</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2008 Aug;2(8):887-900</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18421258</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Can J Microbiol. 2015 Jun;61(6):447-50</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25803209</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2006 Jul;72(7):5069-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16820507</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antonie Van Leeuwenhoek. 2016 Oct;109 (10 ):1353-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27411813</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microb Ecol. 2015 May;69(4):914-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25687126</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2011 Dec;77(24):8523-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21984247</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2010 Mar 10;5(3):e9490</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20224823</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2005 Jan;165(1):317-28</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15720643</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2012 Feb;6(2):343-51</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21900968</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol Rep. 2011 Apr;3(2):203-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23761252</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Jan 1;26(1):139-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19910308</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2006;171(4):825-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16918553</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell Host Microbe. 2007 Nov 15;2(5):291-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18005750</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2011 Mar;13(3):819-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21176055</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Folia Microbiol (Praha). 1967;12(6):515-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">6080528</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2007;176(1):22-36</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17803639</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Appl Microbiol. 2014 Sep;117(3):699-710</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24922184</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2013 Mar;83(3):596-606</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23013423</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Can J Microbiol. 2006 Aug;52(8):769-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16917536</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2015 Jan;81(2):783-93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25398868</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Methods Enzymol. 2013;531:251-67</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24060125</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2015 May 15;81(10):3460-70</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25769823</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Methods. 2010 Sep;7(9):668-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20805793</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2015 Apr;91(4):null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25764467</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2011 Mar;75(3):457-67</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21204867</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2002 Mar 1;39(3):219-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19709201</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Appl Microbiol. 2015 Apr;118(4):890-900</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25619404</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2014 Sep;89(3):516-26</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24807742</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Bacteriol. 1991 Jan;173(2):697-703</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1987160</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2008;177(4):859-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18086226</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2012 Apr;78(8):3020-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22307291</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21390-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23236140</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2011 Mar;21(3):494-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21212162</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Int J Syst Evol Microbiol. 2007 Oct;57(Pt 10):2259-61</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17911292</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 1997 Jan;63(1):139-44</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16535478</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2007 Aug;73(16):5261-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17586664</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2006 Mar;72(3):1719-28</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16517615</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Microbiol. 2012 Apr;50(2):199-206</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22538647</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Jan 15;26(2):266-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19914921</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Methods. 2010 May;7(5):335-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20383131</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2013 Apr 22;8(4):e61217</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23630581</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Microbiol Biotechnol. 2013 Oct 28;23(10):1347-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23949332</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2010 Feb;71(2):169-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20002182</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2007;175(4):743-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17688589</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Biotechnol. 2003 Oct;21(10):433-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14512229</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2015 Nov;91(11):null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26432804</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Biotechnol. 2013 Sep;31(9):814-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23975157</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Plant Sci. 2014 Jun 16;5:209</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24982662</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Oct 1;26(19):2460-1</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20709691</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2014 Sep;16(9):2831-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24118660</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2015 Jul;9(7):1579-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25535937</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Methods. 2013 Dec;10(12):1200-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24076764</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Ecol. 2013 Nov;22(21):5271-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24112409</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Ecol. 1993 Apr;2(2):113-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8180733</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2009 Oct;184(2):449-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19703112</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2014 Jan;42(Database issue):D199-205</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24214961</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2009 Feb;11(2):300-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19196267</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Sci Rep. 2013 Dec 11;3:3471</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24326907</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>
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