Population Genetic Analysis Infers Migration Pathways of Phytophthora ramorum in US Nurseries
Identifieur interne : 000607 ( Main/Exploration ); précédent : 000606; suivant : 000608Population Genetic Analysis Infers Migration Pathways of Phytophthora ramorum in US Nurseries
Auteurs : Erica M. Goss [États-Unis] ; Meg Larsen [États-Unis] ; Gary A. Chastagner [États-Unis] ; Donald R. Givens [États-Unis] ; Niklaus J. Grünwald [États-Unis]Source :
- PLoS Pathogens [ 1553-7366 ] ; 2009.
Abstract
Recently introduced, exotic plant pathogens may exhibit low genetic diversity and be limited to clonal reproduction. However, rapidly mutating molecular markers such as microsatellites can reveal genetic variation within these populations and be used to model putative migration patterns.
Url:
DOI: 10.1371/journal.ppat.1000583
PubMed: 19774068
PubMed Central: 2736564
Affiliations:
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Le document en format XML
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<front><div type="abstract" xml:lang="en"><p>Recently introduced, exotic plant pathogens may exhibit low genetic diversity and be limited to clonal reproduction. However, rapidly mutating molecular markers such as microsatellites can reveal genetic variation within these populations and be used to model putative migration patterns. <italic>Phytophthora ramorum</italic>
is the exotic pathogen, discovered in the late 1990s, that is responsible for sudden oak death in California forests and ramorum blight of common ornamentals. The nursery trade has moved this pathogen from source populations on the West Coast to locations across the United States, thus risking introduction to other native forests. We examined the genetic diversity of <italic>P. ramorum</italic>
in United States nurseries by microsatellite genotyping 279 isolates collected from 19 states between 2004 and 2007. Of the three known <italic>P. ramorum</italic>
clonal lineages, the most common and genetically diverse lineage in the sample was NA1. Two eastward migration pathways were revealed in the clustering of NA1 isolates into two groups, one containing isolates from Connecticut, Oregon, and Washington and the other isolates from California and the remaining states. This finding is consistent with trace forward analyses conducted by the US Department of Agriculture's Animal and Plant Health Inspection Service. At the same time, genetic diversities in several states equaled those observed in California, Oregon, and Washington and two-thirds of multilocus genotypes exhibited limited geographic distributions, indicating that mutation was common during or subsequent to migration. Together, these data suggest that migration, rapid mutation, and genetic drift all play a role in structuring the genetic diversity of <italic>P. ramorum</italic>
in US nurseries. This work demonstrates that fast-evolving genetic markers can be used to examine the evolutionary processes acting on recently introduced pathogens and to infer their putative migration patterns, thus showing promise for the application of forensics to plant pathogens.</p>
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</TEI>
<affiliations><list><country><li>États-Unis</li>
</country>
<region><li>Colorado</li>
<li>Oregon</li>
<li>Washington (État)</li>
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<tree><country name="États-Unis"><region name="Oregon"><name sortKey="Goss, Erica M" sort="Goss, Erica M" uniqKey="Goss E" first="Erica M." last="Goss">Erica M. Goss</name>
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<name sortKey="Chastagner, Gary A" sort="Chastagner, Gary A" uniqKey="Chastagner G" first="Gary A." last="Chastagner">Gary A. Chastagner</name>
<name sortKey="Givens, Donald R" sort="Givens, Donald R" uniqKey="Givens D" first="Donald R." last="Givens">Donald R. Givens</name>
<name sortKey="Grunwald, Niklaus J" sort="Grunwald, Niklaus J" uniqKey="Grunwald N" first="Niklaus J." last="Grünwald">Niklaus J. Grünwald</name>
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</record>
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