Phylogenetic lineages in the Capnodiales
Identifieur interne : 000608 ( Main/Exploration ); précédent : 000607; suivant : 000609Phylogenetic lineages in the Capnodiales
Auteurs : P. W. Crous ; C. L. Schoch ; K. D. Hyde ; A. R. Wood ; C. Gueidan ; G. S. De Hoog ; J. Z. GroenewaldSource :
- Studies in Mycology [ 0166-0616 ] ; 2009.
Abstract
The
Url:
DOI: 10.3114/sim.2009.64.02
PubMed: 20169022
PubMed Central: 2816965
Affiliations:
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Le document en format XML
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<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="aff2"><italic>Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Schoch, C L" sort="Schoch, C L" uniqKey="Schoch C" first="C. L." last="Schoch">C. L. Schoch</name>
<affiliation><nlm:aff id="aff3"><italic>National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Hyde, K D" sort="Hyde, K D" uniqKey="Hyde K" first="K. D." last="Hyde">K. D. Hyde</name>
<affiliation><nlm:aff id="aff4"><italic>School of Science, Mae Fah Luang University, Tasud, Muang, Chiang Rai 57100, Thailand</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Wood, A R" sort="Wood, A R" uniqKey="Wood A" first="A. R." last="Wood">A. R. Wood</name>
<affiliation><nlm:aff id="aff5"><italic>ARC – Plant Protection Research Institute, P. Bag X5017, Stellenbosch, 7599, South Africa</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Gueidan, C" sort="Gueidan, C" uniqKey="Gueidan C" first="C." last="Gueidan">C. Gueidan</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
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<author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Phylogenetic lineages in the <italic>Capnodiales</italic>
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<author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
<affiliation><nlm:aff id="aff2"><italic>Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Schoch, C L" sort="Schoch, C L" uniqKey="Schoch C" first="C. L." last="Schoch">C. L. Schoch</name>
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</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hyde, K D" sort="Hyde, K D" uniqKey="Hyde K" first="K. D." last="Hyde">K. D. Hyde</name>
<affiliation><nlm:aff id="aff4"><italic>School of Science, Mae Fah Luang University, Tasud, Muang, Chiang Rai 57100, Thailand</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Wood, A R" sort="Wood, A R" uniqKey="Wood A" first="A. R." last="Wood">A. R. Wood</name>
<affiliation><nlm:aff id="aff5"><italic>ARC – Plant Protection Research Institute, P. Bag X5017, Stellenbosch, 7599, South Africa</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Gueidan, C" sort="Gueidan, C" uniqKey="Gueidan C" first="C." last="Gueidan">C. Gueidan</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="De Hoog, G S" sort="De Hoog, G S" uniqKey="De Hoog G" first="G. S." last="De Hoog">G. S. De Hoog</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
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<author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<affiliation><nlm:aff id="aff1"><italic>CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands</italic>
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<series><title level="j">Studies in Mycology</title>
<idno type="ISSN">0166-0616</idno>
<idno type="eISSN">1872-9797</idno>
<imprint><date when="2009">2009</date>
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<front><div type="abstract" xml:lang="en"><p>The <italic>Capnodiales</italic>
incorporates plant and human pathogens,
endophytes, saprobes and epiphytes, with a wide range of nutritional modes.
Several species are lichenised, or occur as parasites on fungi, or animals.
The aim of the present study was to use DNA sequence data of the nuclear
ribosomal small and large subunit RNA genes to test the monophyly of the
<italic>Capnodiales</italic>
, and resolve families within the order. We designed
primers to allow the amplification and sequencing of almost the complete
nuclear ribosomal small and large subunit RNA genes. Other than the
<italic>Capnodiaceae</italic>
(sooty moulds), and the <italic>Davidiellaceae</italic>
, which
contains saprobes and plant pathogens, the order presently incorporates
families of major plant pathological importance such as the
<italic>Mycosphaerellaceae</italic>
, <italic>Teratosphaeriaceae</italic>
and
<italic>Schizothyriaceae</italic>
. The <italic>Piedraiaceae</italic>
was not supported, but
resolves in the <italic>Teratosphaeriaceae</italic>
. The <italic>Dissoconiaceae</italic>
is
introduced as a new family to accommodate <italic>Dissoconium</italic>
and
<italic>Ramichloridium</italic>
. Lichenisation, as well as the ability to be saprobic
or plant pathogenic evolved more than once in several families, though the
taxa in the upper clades of the tree lead us to conclude that the strictly
plant pathogenic, nectrotrophic families evolved from saprobic ancestors
(<italic>Capnodiaceae</italic>
), which is the more primitive state.</p>
</div>
</front>
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<tree><noCountry><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<name sortKey="De Hoog, G S" sort="De Hoog, G S" uniqKey="De Hoog G" first="G. S." last="De Hoog">G. S. De Hoog</name>
<name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<name sortKey="Gueidan, C" sort="Gueidan, C" uniqKey="Gueidan C" first="C." last="Gueidan">C. Gueidan</name>
<name sortKey="Hyde, K D" sort="Hyde, K D" uniqKey="Hyde K" first="K. D." last="Hyde">K. D. Hyde</name>
<name sortKey="Schoch, C L" sort="Schoch, C L" uniqKey="Schoch C" first="C. L." last="Schoch">C. L. Schoch</name>
<name sortKey="Wood, A R" sort="Wood, A R" uniqKey="Wood A" first="A. R." last="Wood">A. R. Wood</name>
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