Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils
Identifieur interne : 000212 ( Ncbi/Curation ); précédent : 000211; suivant : 000213Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils
Auteurs : Harald Kellner [Allemagne] ; Patricia Luis [France] ; Marek J. Pecyna [Allemagne] ; Florian Barbi [France] ; Danuta Kapturska [Allemagne] ; Dirk Krüger [Allemagne] ; Donald R. Zak [États-Unis] ; Roland Marmeisse [France] ; Micheline Vandenbol [Belgique] ; Martin Hofrichter [Allemagne]Source :
- PLoS ONE [ 1932-6203 ] ; 2014.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : Fungal Proteins, Peroxidases.
- enzymology : Basidiomycota.
- chemical , metabolism : Fungal Proteins, Peroxidases.
- chemical , secretion : Fungal Proteins, Peroxidases.
- Amino Acid Sequence, Forests, Molecular Sequence Data, Phylogeny, Sequence Analysis, DNA, Soil Microbiology.
Abstract
Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g.
Url:
DOI: 10.1371/journal.pone.0095557
PubMed: 24763280
PubMed Central: 3999038
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000225
- to stream Pmc, to step Curation: Pour aller vers cette notice dans l'étape Curation :000225
- to stream Pmc, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :000061
- to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000015
- to stream PubMed, to step Curation: Pour aller vers cette notice dans l'étape Curation :000015
- to stream PubMed, to step Checkpoint: Pour aller vers cette notice dans l'étape Curation :000015
- to stream Ncbi, to step Merge: Pour aller vers cette notice dans l'étape Curation :00212
Links to Exploration step
PMC:3999038Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils</title><author><name sortKey="Kellner, Harald" sort="Kellner, Harald" uniqKey="Kellner H" first="Harald" last="Kellner">Harald Kellner</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author><author><name sortKey="Luis, Patricia" sort="Luis, Patricia" uniqKey="Luis P" first="Patricia" last="Luis">Patricia Luis</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Pecyna, Marek J" sort="Pecyna, Marek J" uniqKey="Pecyna M" first="Marek J." last="Pecyna">Marek J. Pecyna</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author><author><name sortKey="Barbi, Florian" sort="Barbi, Florian" uniqKey="Barbi F" first="Florian" last="Barbi">Florian Barbi</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Kapturska, Danuta" sort="Kapturska, Danuta" uniqKey="Kapturska D" first="Danuta" last="Kapturska">Danuta Kapturska</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion></affiliation></author><author><name sortKey="Kruger, Dirk" sort="Kruger, Dirk" uniqKey="Kruger D" first="Dirk" last="Krüger">Dirk Krüger</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion></affiliation></author><author><name sortKey="Zak, Donald R" sort="Zak, Donald R" uniqKey="Zak D" first="Donald R." last="Zak">Donald R. Zak</name><affiliation wicri:level="2"><nlm:aff id="aff4"><addr-line>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan</wicri:regionArea><placeName><region type="state">Michigan</region></placeName></affiliation></author><author><name sortKey="Marmeisse, Roland" sort="Marmeisse, Roland" uniqKey="Marmeisse R" first="Roland" last="Marmeisse">Roland Marmeisse</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Vandenbol, Micheline" sort="Vandenbol, Micheline" uniqKey="Vandenbol M" first="Micheline" last="Vandenbol">Micheline Vandenbol</name><affiliation wicri:level="4"><nlm:aff id="aff5"><addr-line>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux, Belgium</addr-line></nlm:aff><country xml:lang="fr">Belgique</country><wicri:regionArea>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux</wicri:regionArea><orgName type="university">Université de Liège</orgName><placeName><settlement type="city">Liège</settlement><region type="region" nuts="1">Région wallonne</region><region type="province" nuts="1">Province de Liège</region></placeName></affiliation></author><author><name sortKey="Hofrichter, Martin" sort="Hofrichter, Martin" uniqKey="Hofrichter M" first="Martin" last="Hofrichter">Martin Hofrichter</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">24763280</idno><idno type="pmc">3999038</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3999038</idno><idno type="RBID">PMC:3999038</idno><idno type="doi">10.1371/journal.pone.0095557</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000225</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000225</idno><idno type="wicri:Area/Pmc/Curation">000225</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000225</idno><idno type="wicri:Area/Pmc/Checkpoint">000061</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000061</idno><idno type="wicri:source">PubMed</idno><idno type="wicri:Area/PubMed/Corpus">000015</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000015</idno><idno type="wicri:Area/PubMed/Curation">000015</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000015</idno><idno type="wicri:Area/PubMed/Checkpoint">000015</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000015</idno><idno type="wicri:Area/Ncbi/Merge">00212</idno><idno type="wicri:Area/Ncbi/Curation">000212</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils</title><author><name sortKey="Kellner, Harald" sort="Kellner, Harald" uniqKey="Kellner H" first="Harald" last="Kellner">Harald Kellner</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author><author><name sortKey="Luis, Patricia" sort="Luis, Patricia" uniqKey="Luis P" first="Patricia" last="Luis">Patricia Luis</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Pecyna, Marek J" sort="Pecyna, Marek J" uniqKey="Pecyna M" first="Marek J." last="Pecyna">Marek J. Pecyna</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author><author><name sortKey="Barbi, Florian" sort="Barbi, Florian" uniqKey="Barbi F" first="Florian" last="Barbi">Florian Barbi</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Kapturska, Danuta" sort="Kapturska, Danuta" uniqKey="Kapturska D" first="Danuta" last="Kapturska">Danuta Kapturska</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion></affiliation></author><author><name sortKey="Kruger, Dirk" sort="Kruger, Dirk" uniqKey="Kruger D" first="Dirk" last="Krüger">Dirk Krüger</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion><wicri:noRegion>Halle/Saale</wicri:noRegion></affiliation></author><author><name sortKey="Zak, Donald R" sort="Zak, Donald R" uniqKey="Zak D" first="Donald R." last="Zak">Donald R. Zak</name><affiliation wicri:level="2"><nlm:aff id="aff4"><addr-line>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan, United States of America</addr-line></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan</wicri:regionArea><placeName><region type="state">Michigan</region></placeName></affiliation></author><author><name sortKey="Marmeisse, Roland" sort="Marmeisse, Roland" uniqKey="Marmeisse R" first="Roland" last="Marmeisse">Roland Marmeisse</name><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France</addr-line></nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea><placeName><region type="region" nuts="2">Auvergne-Rhône-Alpes</region><region type="old region" nuts="2">Rhône-Alpes</region><settlement type="city">Villeurbanne</settlement><settlement type="city" wicri:auto="agglo">Lyon</settlement></placeName></affiliation></author><author><name sortKey="Vandenbol, Micheline" sort="Vandenbol, Micheline" uniqKey="Vandenbol M" first="Micheline" last="Vandenbol">Micheline Vandenbol</name><affiliation wicri:level="4"><nlm:aff id="aff5"><addr-line>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux, Belgium</addr-line></nlm:aff><country xml:lang="fr">Belgique</country><wicri:regionArea>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux</wicri:regionArea><orgName type="university">Université de Liège</orgName><placeName><settlement type="city">Liège</settlement><region type="region" nuts="1">Région wallonne</region><region type="province" nuts="1">Province de Liège</region></placeName></affiliation></author><author><name sortKey="Hofrichter, Martin" sort="Hofrichter, Martin" uniqKey="Hofrichter M" first="Martin" last="Hofrichter">Martin Hofrichter</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany</addr-line></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea><wicri:noRegion>Zittau</wicri:noRegion><orgName type="university">Université technique de Dresde</orgName><placeName><settlement type="city">Dresde</settlement><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region></placeName></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term><term>Basidiomycota (enzymology)</term><term>Forests</term><term>Fungal Proteins (genetics)</term><term>Fungal Proteins (metabolism)</term><term>Fungal Proteins (secretion)</term><term>Molecular Sequence Data</term><term>Peroxidases (genetics)</term><term>Peroxidases (metabolism)</term><term>Peroxidases (secretion)</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Basidiomycota</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" type="chemical" qualifier="secretion" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Forests</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g. <italic>Fagus</italic>, <italic>Picea</italic>, <italic>Acer</italic>, <italic>Quercus</italic>, and <italic>Populus</italic> spp.), which are widespread in Europe and North America. Manganese peroxidases and unspecific peroxygenases were found expressed in all nine investigated forest sites, and dye-decolorizing peroxidases were observed in five of the nine sites, thereby indicating biological significance of these enzymes for fungal physiology and ecosystem processes. Transcripts of selected secretory peroxidase genes were also analyzed in pure cultures of several litter-decomposing species and other fungi. Using this information, we were able to match, in environmental litter samples, two manganese peroxidase sequences to <italic>Mycena galopus</italic> and <italic>Mycena epipterygia</italic> and one unspecific peroxygenase transcript to <italic>Mycena galopus</italic>, suggesting an important role of this litter- and coarse woody debris-dwelling genus in the disintegration and transformation of litter aromatics and organic matter formation.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Kogel Knabner, I" uniqKey="Kogel Knabner I">I Kögel-Knabner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Baldrian, P" uniqKey="Baldrian P">P Baldrian</name></author><author><name sortKey="Lindahl, B" uniqKey="Lindahl B">B Lindahl</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Floudas, D" uniqKey="Floudas D">D Floudas</name></author><author><name sortKey="Binder, M" uniqKey="Binder M">M Binder</name></author><author><name sortKey="Riley, R" uniqKey="Riley R">R Riley</name></author><author><name sortKey="Barry, K" uniqKey="Barry K">K Barry</name></author><author><name sortKey="Blanchette, Ra" uniqKey="Blanchette R">RA Blanchette</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lundell, Tk" uniqKey="Lundell T">TK Lundell</name></author><author><name sortKey="M Kel, Mr" uniqKey="M Kel M">MR Mäkelä</name></author><author><name sortKey="Hilden, K" uniqKey="Hilden K">K Hildén</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Morgenstern, I" uniqKey="Morgenstern I">I Morgenstern</name></author><author><name sortKey="Klopman, S" uniqKey="Klopman S">S Klopman</name></author><author><name sortKey="Hibbett, Ds" uniqKey="Hibbett D">DS Hibbett</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Pecyna, Mj" uniqKey="Pecyna M">MJ Pecyna</name></author><author><name sortKey="Liers, C" uniqKey="Liers C">C Liers</name></author><author><name sortKey="Lundell, T" uniqKey="Lundell T">T Lundell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liers, C" uniqKey="Liers C">C Liers</name></author><author><name sortKey="Bobeth, C" uniqKey="Bobeth C">C Bobeth</name></author><author><name sortKey="Pecyna, M" uniqKey="Pecyna M">M Pecyna</name></author><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Baldrian, P" uniqKey="Baldrian P">P Baldrian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Harvey, Pj" uniqKey="Harvey P">PJ Harvey</name></author><author><name sortKey="Floris, R" uniqKey="Floris R">R Floris</name></author><author><name sortKey="Lundell, T" uniqKey="Lundell T">T Lundell</name></author><author><name sortKey="Palmer, Jm" uniqKey="Palmer J">JM Palmer</name></author><author><name sortKey="Schoemaker, He" uniqKey="Schoemaker H">HE Schoemaker</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wunderwald, U" uniqKey="Wunderwald U">U Wunderwald</name></author><author><name sortKey="Kreisel, G" uniqKey="Kreisel G">G Kreisel</name></author><author><name sortKey="Braun, M" uniqKey="Braun M">M Braun</name></author><author><name sortKey="Schulz, M" uniqKey="Schulz M">M Schulz</name></author><author><name sortKey="J Ger, C" uniqKey="J Ger C">C Jäger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jee, Sh" uniqKey="Jee S">SH Jee</name></author><author><name sortKey="Kim, Yj" uniqKey="Kim Y">YJ Kim</name></author><author><name sortKey="Ko, So" uniqKey="Ko S">SO Ko</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Criquet, S" uniqKey="Criquet S">S Criquet</name></author><author><name sortKey="Farnet, Am" uniqKey="Farnet A">AM Farnet</name></author><author><name sortKey="Tagger, S" uniqKey="Tagger S">S Tagger</name></author><author><name sortKey="Le Petit, J" uniqKey="Le Petit J">J Le Petit</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kellner, H" uniqKey="Kellner H">H Kellner</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Vandenbol, M" uniqKey="Vandenbol M">M Vandenbol</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Edwards, Ip" uniqKey="Edwards I">IP Edwards</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Kellner, H" uniqKey="Kellner H">H Kellner</name></author><author><name sortKey="Eisenlord, Sd" uniqKey="Eisenlord S">SD Eisenlord</name></author><author><name sortKey="Pregitzer, Ks" uniqKey="Pregitzer K">KS Pregitzer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bodeker, Itm" uniqKey="Bodeker I">ITM Bödeker</name></author><author><name sortKey="Nygren, Cmr" uniqKey="Nygren C">CMR Nygren</name></author><author><name sortKey="Taylor, Afs" uniqKey="Taylor A">AFS Taylor</name></author><author><name sortKey="Olson, A" uniqKey="Olson A">A Olson</name></author><author><name sortKey="Lindahl, Bd" uniqKey="Lindahl B">BD Lindahl</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Baldrian, P" uniqKey="Baldrian P">P Baldrian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cullings, K" uniqKey="Cullings K">K Cullings</name></author><author><name sortKey="Courty, P E" uniqKey="Courty P">P-E Courty</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Luis, P" uniqKey="Luis P">P Luis</name></author><author><name sortKey="Kellner, H" uniqKey="Kellner H">H Kellner</name></author><author><name sortKey="Martin, F" uniqKey="Martin F">F Martin</name></author><author><name sortKey="Buscot, F" uniqKey="Buscot F">F Buscot</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Maijala, P" uniqKey="Maijala P">P Maijala</name></author><author><name sortKey="Harrington, Tc" uniqKey="Harrington T">TC Harrington</name></author><author><name sortKey="Raudaskoski, M" uniqKey="Raudaskoski M">M Raudaskoski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hall, Ta" uniqKey="Hall T">TA Hall</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Koua, D" uniqKey="Koua D">D Koua</name></author><author><name sortKey="Cerutti, L" uniqKey="Cerutti L">L Cerutti</name></author><author><name sortKey="Falquet, L" uniqKey="Falquet L">L Falquet</name></author><author><name sortKey="Sigrist, Cj" uniqKey="Sigrist C">CJ Sigrist</name></author><author><name sortKey="Theiler, G" uniqKey="Theiler G">G Theiler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Peterson, D" uniqKey="Peterson D">D Peterson</name></author><author><name sortKey="Peterson, N" uniqKey="Peterson N">N Peterson</name></author><author><name sortKey="Stecher, G" uniqKey="Stecher G">G Stecher</name></author><author><name sortKey="Nei, M" uniqKey="Nei M">M Nei</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Steffen, Kt" uniqKey="Steffen K">KT Steffen</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author><author><name sortKey="Hatakka, A" uniqKey="Hatakka A">A Hatakka</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Nuske, J" uniqKey="Nuske J">J Nüske</name></author><author><name sortKey="Scheibner, K" uniqKey="Scheibner K">K Scheibner</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liers, C" uniqKey="Liers C">C Liers</name></author><author><name sortKey="Arnstadt, T" uniqKey="Arnstadt T">T Arnstadt</name></author><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wariishi, H" uniqKey="Wariishi H">H Wariishi</name></author><author><name sortKey="Dunford, Hb" uniqKey="Dunford H">HB Dunford</name></author><author><name sortKey="Macdonald, Id" uniqKey="Macdonald I">ID MacDonald</name></author><author><name sortKey="Gold, Mh" uniqKey="Gold M">MH Gold</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pecyna, Mj" uniqKey="Pecyna M">MJ Pecyna</name></author><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Bittner, B" uniqKey="Bittner B">B Bittner</name></author><author><name sortKey="Clemens, A" uniqKey="Clemens A">A Clemens</name></author><author><name sortKey="Scheibner, K" uniqKey="Scheibner K">K Scheibner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yoshida, T" uniqKey="Yoshida T">T Yoshida</name></author><author><name sortKey="Tsuge, H" uniqKey="Tsuge H">H Tsuge</name></author><author><name sortKey="Konno, H" uniqKey="Konno H">H Konno</name></author><author><name sortKey="Hisabori, T" uniqKey="Hisabori T">T Hisabori</name></author><author><name sortKey="Sugano, Y" uniqKey="Sugano Y">Y Sugano</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Sinsabaugh, Rl" uniqKey="Sinsabaugh R">RL Sinsabaugh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Eichlerova, I" uniqKey="Eichlerova I">I Eichlerová</name></author><author><name sortKey="Snajdr, J" uniqKey="Snajdr J">J Šnajdr</name></author><author><name sortKey="Baldrian, P" uniqKey="Baldrian P">P Baldrian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author><author><name sortKey="Fritsche, W" uniqKey="Fritsche W">W Fritsche</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Valaskova, V" uniqKey="Valaskova V">V Valášková</name></author><author><name sortKey="Snajdr, J" uniqKey="Snajdr J">J Šnajdr</name></author><author><name sortKey="Bittner, B" uniqKey="Bittner B">B Bittner</name></author><author><name sortKey="Cajthaml, T" uniqKey="Cajthaml T">T Cajthaml</name></author><author><name sortKey="Merhautova, V" uniqKey="Merhautova V">V Merhautová</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Steffen, Kt" uniqKey="Steffen K">KT Steffen</name></author><author><name sortKey="Cajthaml, T" uniqKey="Cajthaml T">T Cajthaml</name></author><author><name sortKey="Snajdr, J" uniqKey="Snajdr J">J Snajdr</name></author><author><name sortKey="Baldrian, P" uniqKey="Baldrian P">P Baldrian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Snajdr, J" uniqKey="Snajdr J">J Snajdr</name></author><author><name sortKey="Cajthaml, T" uniqKey="Cajthaml T">T Cajthaml</name></author><author><name sortKey="Valaskova, V" uniqKey="Valaskova V">V Valášková</name></author><author><name sortKey="Merhautova, V" uniqKey="Merhautova V">V Merhautová</name></author><author><name sortKey="Petrankova, M" uniqKey="Petrankova M">M Petránková</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Steffen, Kt" uniqKey="Steffen K">KT Steffen</name></author><author><name sortKey="Hatakka, A" uniqKey="Hatakka A">A Hatakka</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kellner, H" uniqKey="Kellner H">H Kellner</name></author><author><name sortKey="Luis, P" uniqKey="Luis P">P Luis</name></author><author><name sortKey="Schlitt, B" uniqKey="Schlitt B">B Schlitt</name></author><author><name sortKey="Buscot, F" uniqKey="Buscot F">F Buscot</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ghosh, A" uniqKey="Ghosh A">A Ghosh</name></author><author><name sortKey="Frankland, Jc" uniqKey="Frankland J">JC Frankland</name></author><author><name sortKey="Thurston, Cf" uniqKey="Thurston C">CF Thurston</name></author><author><name sortKey="Robinson, Ch" uniqKey="Robinson C">CH Robinson</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Robert, C" uniqKey="Robert C">C Robert</name></author><author><name sortKey="Wilson, Cs" uniqKey="Wilson C">CS Wilson</name></author><author><name sortKey="Guengerich, Fp" uniqKey="Guengerich F">FP Guengerich</name></author><author><name sortKey="Arreto, Cd" uniqKey="Arreto C">CD Arreto</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Grobe, G" uniqKey="Grobe G">G Gröbe</name></author><author><name sortKey="Ullrich, R" uniqKey="Ullrich R">R Ullrich</name></author><author><name sortKey="Pecyna, Mj" uniqKey="Pecyna M">MJ Pecyna</name></author><author><name sortKey="Kapturska, D" uniqKey="Kapturska D">D Kapturska</name></author><author><name sortKey="Friedrich, F" uniqKey="Friedrich F">F Friedrich</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Morin, E" uniqKey="Morin E">E Morin</name></author><author><name sortKey="Kohler, A" uniqKey="Kohler A">A Kohler</name></author><author><name sortKey="Baker, Ar" uniqKey="Baker A">AR Baker</name></author><author><name sortKey="Foulongne Oriol, M" uniqKey="Foulongne Oriol M">M Foulongne-Oriol</name></author><author><name sortKey="Lombard, V" uniqKey="Lombard V">V Lombard</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Weber, Cf" uniqKey="Weber C">CF Weber</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Hungate, Ba" uniqKey="Hungate B">BA Hungate</name></author><author><name sortKey="Jackson, Rb" uniqKey="Jackson R">RB Jackson</name></author><author><name sortKey="Vilgalys, R" uniqKey="Vilgalys R">R Vilgalys</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deforest, Jl" uniqKey="Deforest J">JL DeForest</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Pregitzer, Ks" uniqKey="Pregitzer K">KS Pregitzer</name></author><author><name sortKey="Burton, Aj" uniqKey="Burton A">AJ Burton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deforest, Jl" uniqKey="Deforest J">JL DeForest</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Pregitzer, Ks" uniqKey="Pregitzer K">KS Pregitzer</name></author><author><name sortKey="Burton, Aj" uniqKey="Burton A">AJ Burton</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Kapich, An" uniqKey="Kapich A">AN Kapich</name></author><author><name sortKey="Steffen, Kt" uniqKey="Steffen K">KT Steffen</name></author><author><name sortKey="Hofrichter, M" uniqKey="Hofrichter M">M Hofrichter</name></author><author><name sortKey="Hatakka, A" uniqKey="Hatakka A">A Hatakka</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Larson, Jl" uniqKey="Larson J">JL Larson</name></author><author><name sortKey="Zak, Dr" uniqKey="Zak D">DR Zak</name></author><author><name sortKey="Sinsabaugh, Rl" uniqKey="Sinsabaugh R">RL Sinsabaugh</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Kaiser, K" uniqKey="Kaiser K">K Kaiser</name></author><author><name sortKey="Eusterhues, K" uniqKey="Eusterhues K">K Eusterhues</name></author><author><name sortKey="Rumpel, C" uniqKey="Rumpel C">C Rumpel</name></author><author><name sortKey="Guggenberger, G" uniqKey="Guggenberger G">G Guggenberger</name></author><author><name sortKey="Kogel Knabner, I" uniqKey="Kogel Knabner I">I Kögel-Knabner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fischer, M" uniqKey="Fischer M">M Fischer</name></author><author><name sortKey="Bossdorf, O" uniqKey="Bossdorf O">O Bossdorf</name></author><author><name sortKey="Gockel, S" uniqKey="Gockel S">S Gockel</name></author><author><name sortKey="H Nsel, F" uniqKey="H Nsel F">F Hänsel</name></author><author><name sortKey="Hemp, A" uniqKey="Hemp A">A Hemp</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Allard, V" uniqKey="Allard V">V Allard</name></author><author><name sortKey="Ourcival, Jm" uniqKey="Ourcival J">JM Ourcival</name></author><author><name sortKey="Rambal, S" uniqKey="Rambal S">S Rambal</name></author><author><name sortKey="Joffre, R" uniqKey="Joffre R">R Joffre</name></author><author><name sortKey="Rocheteau, A" uniqKey="Rocheteau A">A Rocheteau</name></author></analytic></biblStruct></listBibl></div1></back></TEI></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/CheneBelgiqueV1/Data/Ncbi/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000212 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Ncbi/Curation/biblio.hfd -nk 000212 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= CheneBelgiqueV1
|flux= Ncbi
|étape= Curation
|type= RBID
|clé= PMC:3999038
|texte= Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Ncbi/Curation/RBID.i -Sk "pubmed:24763280" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Ncbi/Curation/biblio.hfd \
| NlmPubMed2Wicri -a CheneBelgiqueV1
| This area was generated with Dilib version V0.6.27. |  |